RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 RANBP6O60518 1105 aaKnown RBP15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 ITGA6P23229 1130 aa15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 UTP14AQ9BVJ6 771 aaKnown RBP15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 BCL11BQ9C0K0 894 aaPredicted RBP15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 A0A0D9SFI3 127 aa15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 RPS6KB1P23443 525 aa15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 DDX19AQ9NUU7 478 aaKnown RBP15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 POLA2Q14181 598 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 WASF1Q92558 559 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 TLR7Q9NYK1 1049 aaKnown RBP15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 EPB41L2O43491 1005 aaKnown RBP15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 TPM1P09493 284 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 RASEFQ8IZ41 740 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 XAGE2Q96GT9 111 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 ZSCAN16Q9H4T2 348 aaPredicted RBP15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 ANKIB1Q9P2G1 1089 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 CYP27B1O15528 508 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 TCIRG1Q13488 830 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 FSIP1Q8NA03 581 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 CHAMP1Q96JM3 812 aa15.41■□□□□ 0.06
PPP4R3B-206ENST00000616407 FILIP1Q7Z7B0 1213 aa15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 LMBRD1Q9NUN5 540 aa15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 METAP2P50579 478 aaKnown RBP eCLIP15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 PRC1O43663 620 aa15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 FAM173BQ6P4H8 233 aa15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 ANKRD20A12PQ8NF67 263 aa15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 C8orf37Q96NL8 207 aa15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 COPRSQ9NQ92 184 aa15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 HELLSQ9NRZ9 838 aa15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 COL3A1P02461 1466 aaPredicted RBP15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 MFSD6Q6ZSS7 791 aa15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 RNF41Q9H4P4 317 aaPredicted RBP15.4■□□□□ 0.06
PPP4R3B-206ENST00000616407 PDILTQ8N807 584 aa15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 MYOM1P52179 1685 aa15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 SSH2Q76I76 1423 aa15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 CCDC196A0A1B0GTZ2 297 aa15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 BRD1O95696 1058 aa15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 ANKRD18AQ8IVF6 992 aa15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 SEC62Q99442 399 aaKnown RBP15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 TSR1Q2NL82 804 aaKnown RBP15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 SMARCC1Q92922 1105 aaPredicted RBP15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 CCDC47Q96A33 483 aaKnown RBP15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 DACT1Q9NYF0 836 aa15.39■□□□□ 0.05
PPP4R3B-206ENST00000616407 TOM1O60784 492 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 NBPF5PQ86XG9 351 aaPredicted RBP15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 LSG1Q9H089 658 aaKnown RBP15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 WDR17Q8IZU2 1322 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 ADCY5O95622 1261 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 DZIP1Q86YF9 867 aaKnown RBP15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 CCAR1Q8IX12 1150 aaKnown RBP15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 CARD10Q9BWT7 1032 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 ASAP1Q9ULH1 1129 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 SERPINC1P01008 464 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 CYP7A1P22680 504 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 LRRC24Q50LG9 513 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 IQCA1Q86XH1 822 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 TM6SF1Q9BZW5 370 aa15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 DBNLQ9UJU6 430 aaKnown RBP15.38■□□□□ 0.05
PPP4R3B-206ENST00000616407 ERBB4Q15303 1308 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 UBAP1LF5GYI3 381 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 SASH1O94885 1247 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 USP5P45974 858 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 SSRP1Q08945 709 aaKnown RBP15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 PI4K2BQ8TCG2 481 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 SH3TC1Q8TE82 1336 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 PTPDC1A2A3K4 754 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 AEBP2Q6ZN18 517 aaPredicted RBP15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 SLC4A4Q9Y6R1 1079 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 LMTK3Q96Q04 1460 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 IGKV5-2P06315 115 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 ZNF165P49910 485 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 BRINP3Q76B58 766 aa15.37■□□□□ 0.05
PPP4R3B-206ENST00000616407 SPATA31A3Q5VYP0 1347 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 ATP2B2Q01814 1243 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 ME3Q16798 604 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 ADCK5Q3MIX3 580 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 CCAR2Q8N163 923 aaKnown RBP15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 SLC26A6Q9BXS9 759 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 ANO8Q9HCE9 1232 aaPredicted RBP15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 ANO10Q9NW15 660 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 NOL7Q9UMY1 257 aaKnown RBP15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 ZBTB43O43298 467 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 PDE8AO60658 829 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 RICTORQ6R327 1708 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 PCMTD1Q96MG8 357 aaPredicted RBP15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 RBSNQ9H1K0 784 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 GADD45BO75293 160 aaPredicted RBP15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 MAGEB6Q8N7X4 407 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 SETDB2Q96T68 719 aa15.36■□□□□ 0.05
PPP4R3B-206ENST00000616407 ZAP70P43403 619 aa15.35■□□□□ 0.05
PPP4R3B-206ENST00000616407 NLRP3Q96P20 1036 aa15.35■□□□□ 0.05
PPP4R3B-206ENST00000616407 MKNK2Q9HBH9 465 aa15.35■□□□□ 0.05
PPP4R3B-206ENST00000616407 CTAGE5O15320 804 aa15.35■□□□□ 0.05
PPP4R3B-206ENST00000616407 MIGA1Q8NAN2 632 aa15.35■□□□□ 0.05
PPP4R3B-206ENST00000616407 ZNF335Q9H4Z2 1342 aaPredicted RBP15.35■□□□□ 0.05
PPP4R3B-206ENST00000616407 NCOA5Q9HCD5 579 aaKnown RBP15.35■□□□□ 0.05
PPP4R3B-206ENST00000616407 BIN1O00499 593 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 TPM2P07951 284 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms