RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-238ENST00000616352 RAB11FIP3O75154 756 aa28.49■■■□□ 2.15
ACACA-238ENST00000616352 IL15P40933 162 aaPredicted RBP28.49■■■□□ 2.15
ACACA-238ENST00000616352 CNNM1Q9NRU3 951 aa28.49■■■□□ 2.15
ACACA-238ENST00000616352 LTBP1Q14766 1721 aa28.49■■■□□ 2.15
ACACA-238ENST00000616352 SASH1O94885 1247 aa28.48■■■□□ 2.15
ACACA-238ENST00000616352 KLHL34Q8N239 644 aa28.48■■■□□ 2.15
ACACA-238ENST00000616352 CNKSR1Q969H4 720 aa28.48■■■□□ 2.15
ACACA-238ENST00000616352 ARFGEF1Q9Y6D6 1849 aa28.47■■■□□ 2.15
ACACA-238ENST00000616352 ERC1Q8IUD2 1116 aa28.47■■■□□ 2.15
ACACA-238ENST00000616352 OS9Q13438 667 aaPredicted RBP28.46■■■□□ 2.15
ACACA-238ENST00000616352 TMC4Q7Z404 712 aa28.46■■■□□ 2.15
ACACA-238ENST00000616352 FHDC1Q9C0D6 1143 aaPredicted RBP28.46■■■□□ 2.15
ACACA-238ENST00000616352 PPEF1O14829 653 aaPredicted RBP28.45■■■□□ 2.14
ACACA-238ENST00000616352 PRPF40BQ6NWY9 871 aaKnown RBP28.45■■■□□ 2.14
ACACA-238ENST00000616352 RHPN1Q8TCX5 695 aa28.45■■■□□ 2.14
ACACA-238ENST00000616352 KIF1BPQ96EK5 621 aa28.45■■■□□ 2.14
ACACA-238ENST00000616352 MINPP1Q9UNW1 487 aa28.45■■■□□ 2.14
ACACA-238ENST00000616352 APBB1O00213 710 aa28.44■■■□□ 2.14
ACACA-238ENST00000616352 SLC51AQ86UW1 340 aa28.44■■■□□ 2.14
ACACA-238ENST00000616352 VGLL2Q8N8G2 317 aa28.44■■■□□ 2.14
ACACA-238ENST00000616352 NLGN2Q8NFZ4 835 aa28.44■■■□□ 2.14
ACACA-238ENST00000616352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.44■■■□□ 2.14
ACACA-238ENST00000616352 MROH5Q6ZUA9 1318 aa28.44■■■□□ 2.14
ACACA-238ENST00000616352 ARAP2Q8WZ64 1704 aa28.44■■■□□ 2.14
ACACA-238ENST00000616352 TTLL6Q8N841 843 aa28.43■■■□□ 2.14
ACACA-238ENST00000616352 LRRCC1Q9C099 1032 aa28.43■■■□□ 2.14
ACACA-238ENST00000616352 CHRNDQ07001 517 aa28.43■■■□□ 2.14
ACACA-238ENST00000616352 ATP6V0A2Q9Y487 856 aa28.43■■■□□ 2.14
ACACA-238ENST00000616352 TFCP2Q12800 502 aa28.42■■■□□ 2.14
ACACA-238ENST00000616352 METTL24Q5JXM2 366 aa28.42■■■□□ 2.14
ACACA-238ENST00000616352 SP8Q8IXZ3 490 aa28.42■■■□□ 2.14
ACACA-238ENST00000616352 PIM2Q9P1W9 311 aa28.42■■■□□ 2.14
ACACA-238ENST00000616352 NUCB1Q02818 461 aa28.41■■■□□ 2.14
ACACA-238ENST00000616352 ANKRD45Q5TZF3 282 aa28.41■■■□□ 2.14
ACACA-238ENST00000616352 C7orf43Q8WVR3 580 aa28.41■■■□□ 2.14
ACACA-238ENST00000616352 CEP126Q9P2H0 1117 aa28.4■■■□□ 2.14
ACACA-238ENST00000616352 SMARCA5O60264 1052 aaPredicted RBP28.4■■■□□ 2.14
ACACA-238ENST00000616352 PDE8BO95263 885 aa28.4■■■□□ 2.14
ACACA-238ENST00000616352 SYT17Q9BSW7 474 aa28.4■■■□□ 2.14
ACACA-238ENST00000616352 SNED1Q8TER0 1413 aa28.39■■■□□ 2.14
ACACA-238ENST00000616352 HELBQ8NG08 1087 aaPredicted RBP28.39■■■□□ 2.13
ACACA-238ENST00000616352 IL1RAPL2Q9NP60 686 aa28.39■■■□□ 2.13
ACACA-238ENST00000616352 FER1L6Q2WGJ9 1857 aa28.38■■■□□ 2.13
ACACA-238ENST00000616352 ZNF609O15014 1411 aa28.38■■■□□ 2.13
ACACA-238ENST00000616352 ANKRD2Q9GZV1 360 aa28.38■■■□□ 2.13
ACACA-238ENST00000616352 GPR108Q9NPR9 543 aa28.38■■■□□ 2.13
ACACA-238ENST00000616352 DUOX1Q9NRD9 1551 aa28.38■■■□□ 2.13
ACACA-238ENST00000616352 TAF5LO75529 589 aa28.37■■■□□ 2.13
ACACA-238ENST00000616352 CHD1LQ86WJ1 897 aa28.37■■■□□ 2.13
ACACA-238ENST00000616352 OLFM4Q6UX06 510 aa28.36■■■□□ 2.13
ACACA-238ENST00000616352 XDHP47989 1333 aa28.36■■■□□ 2.13
ACACA-238ENST00000616352 DALRD3Q5D0E6 543 aaKnown RBP28.36■■■□□ 2.13
ACACA-238ENST00000616352 LNPKQ9C0E8 428 aa28.36■■■□□ 2.13
ACACA-238ENST00000616352 PODXL2Q9NZ53 605 aa28.36■■■□□ 2.13
ACACA-238ENST00000616352 TNNI3KQ59H18 835 aa28.35■■■□□ 2.13
ACACA-238ENST00000616352 CLASRPQ8N2M8 674 aaKnown RBP28.35■■■□□ 2.13
ACACA-238ENST00000616352 EAF2Q96CJ1 260 aaPredicted RBP28.35■■■□□ 2.13
ACACA-238ENST00000616352 FPGT-TNNI3KV9GXZ4 949 aa28.35■■■□□ 2.13
ACACA-238ENST00000616352 FGFR2P21802 821 aa28.34■■■□□ 2.13
ACACA-238ENST00000616352 GPSM2P81274 684 aa28.34■■■□□ 2.13
ACACA-238ENST00000616352 AKAP2Q9Y2D5 859 aa28.34■■■□□ 2.13
ACACA-238ENST00000616352 PUM3Q15397 648 aaKnown RBP28.33■■■□□ 2.13
ACACA-238ENST00000616352 SNAP23O00161 211 aa28.32■■■□□ 2.12
ACACA-238ENST00000616352 CC2D2BQ6DHV5 1058 aa28.32■■■□□ 2.12
ACACA-238ENST00000616352 ANKIB1Q9P2G1 1089 aa28.32■■■□□ 2.12
ACACA-238ENST00000616352 ZBTB47Q9UFB7 747 aaPredicted RBP28.32■■■□□ 2.12
ACACA-238ENST00000616352 WWC3Q9ULE0 1092 aa28.32■■■□□ 2.12
ACACA-238ENST00000616352 A0A1B0GUL7 405 aa28.32■■■□□ 2.12
ACACA-238ENST00000616352 WTIPA6NIX2 430 aaPredicted RBP28.32■■■□□ 2.12
ACACA-238ENST00000616352 C21orf2O43822 256 aa28.32■■■□□ 2.12
ACACA-238ENST00000616352 ATP2B3Q16720 1220 aa28.32■■■□□ 2.12
ACACA-238ENST00000616352 NSFL1CQ9UNZ2 370 aaKnown RBP28.32■■■□□ 2.12
ACACA-238ENST00000616352 UBE4AQ14139 1066 aa28.31■■■□□ 2.12
ACACA-238ENST00000616352 AACSQ86V21 672 aa28.31■■■□□ 2.12
ACACA-238ENST00000616352 TMX4Q9H1E5 349 aaPredicted RBP28.31■■■□□ 2.12
ACACA-238ENST00000616352 ZNF219Q9P2Y4 722 aaPredicted RBP28.31■■■□□ 2.12
ACACA-238ENST00000616352 LEMD3Q9Y2U8 911 aa28.31■■■□□ 2.12
ACACA-238ENST00000616352 TIMM10P62072 90 aa28.3■■■□□ 2.12
ACACA-238ENST00000616352 C16orf71Q8IYS4 520 aaPredicted RBP28.3■■■□□ 2.12
ACACA-238ENST00000616352 LPIN2Q92539 896 aa28.3■■■□□ 2.12
ACACA-238ENST00000616352 MPNDQ8N594 471 aa28.29■■■□□ 2.12
ACACA-238ENST00000616352 MYH13Q9UKX3 1938 aa28.29■■■□□ 2.12
ACACA-238ENST00000616352 ZNF804BA4D1E1 1349 aa28.29■■■□□ 2.12
ACACA-238ENST00000616352 SALL3Q9BXA9 1300 aa28.29■■■□□ 2.12
ACACA-238ENST00000616352 PDE4AP27815 886 aa28.29■■■□□ 2.12
ACACA-238ENST00000616352 BCL11AQ9H165 835 aa28.29■■■□□ 2.12
ACACA-238ENST00000616352 BCS1LQ9Y276 419 aa28.29■■■□□ 2.12
ACACA-238ENST00000616352 IRS2Q9Y4H2 1338 aa28.28■■■□□ 2.12
ACACA-238ENST00000616352 ATP2B4P23634 1241 aa28.28■■■□□ 2.12
ACACA-238ENST00000616352 GRIPAP1Q4V328 841 aa28.28■■■□□ 2.12
ACACA-238ENST00000616352 CCDC93Q567U6 631 aa28.28■■■□□ 2.12
ACACA-238ENST00000616352 SOGA3Q5TF21 947 aa28.28■■■□□ 2.12
ACACA-238ENST00000616352 TBC1D16Q8TBP0 767 aa28.28■■■□□ 2.12
ACACA-238ENST00000616352 OTUD7AQ8TE49 926 aaPredicted RBP28.28■■■□□ 2.12
ACACA-238ENST00000616352 CCDC8Q9H0W5 538 aaPredicted RBP28.28■■■□□ 2.12
ACACA-238ENST00000616352 TLR7Q9NYK1 1049 aaKnown RBP28.28■■■□□ 2.12
ACACA-238ENST00000616352 POLLQ9UGP5 575 aa28.28■■■□□ 2.12
ACACA-238ENST00000616352 DBNLQ9UJU6 430 aaKnown RBP28.28■■■□□ 2.12
ACACA-238ENST00000616352 GGA1Q9UJY5 639 aa28.28■■■□□ 2.12
ACACA-238ENST00000616352 CCDC88AQ3V6T2 1871 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms