RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 POTEJP0CG39 1038 aa21.54■■□□□ 1.04
LHX1-202ENST00000616237 SUCLG2Q96I99 432 aa21.54■■□□□ 1.04
LHX1-202ENST00000616237 SPEF2Q9C093 1822 aa21.54■■□□□ 1.04
LHX1-202ENST00000616237 UFL1O94874 794 aa21.53■■□□□ 1.04
LHX1-202ENST00000616237 LMBR1LQ6UX01 489 aa21.53■■□□□ 1.04
LHX1-202ENST00000616237 TAF1DQ9H5J8 278 aaPredicted RBP21.53■■□□□ 1.04
LHX1-202ENST00000616237 ANKIB1Q9P2G1 1089 aa21.53■■□□□ 1.04
LHX1-202ENST00000616237 ZBED9Q6R2W3 1325 aa21.53■■□□□ 1.04
LHX1-202ENST00000616237 HSPA6P17066 643 aa21.52■■□□□ 1.04
LHX1-202ENST00000616237 DBNDD1Q9H9R9 158 aa21.52■■□□□ 1.04
LHX1-202ENST00000616237 GGA1Q9UJY5 639 aa21.52■■□□□ 1.04
LHX1-202ENST00000616237 XDHP47989 1333 aa21.52■■□□□ 1.04
LHX1-202ENST00000616237 SCN4AP35499 1836 aa21.52■■□□□ 1.04
LHX1-202ENST00000616237 IQCA1LA6NCM1 817 aa21.51■■□□□ 1.03
LHX1-202ENST00000616237 IGHMBP2P38935 993 aaKnown RBP21.51■■□□□ 1.03
LHX1-202ENST00000616237 SCNN1DP51172 638 aa21.51■■□□□ 1.03
LHX1-202ENST00000616237 FSTL1Q12841 308 aa21.51■■□□□ 1.03
LHX1-202ENST00000616237 USP44Q9H0E7 712 aa21.51■■□□□ 1.03
LHX1-202ENST00000616237 ANKRD18BA2A2Z9 1011 aa21.5■■□□□ 1.03
LHX1-202ENST00000616237 RAD17O75943 681 aa21.5■■□□□ 1.03
LHX1-202ENST00000616237 DOK7Q18PE1 504 aa21.5■■□□□ 1.03
LHX1-202ENST00000616237 SMC1BQ8NDV3 1235 aa21.5■■□□□ 1.03
LHX1-202ENST00000616237 EYA3Q99504 573 aa21.5■■□□□ 1.03
LHX1-202ENST00000616237 HACL1Q9UJ83 578 aa21.5■■□□□ 1.03
LHX1-202ENST00000616237 CHMP3Q9Y3E7 222 aa21.5■■□□□ 1.03
LHX1-202ENST00000616237 CEP350Q5VT06 3117 aa21.5■■□□□ 1.03
LHX1-202ENST00000616237 BCAR3O75815 825 aa21.49■■□□□ 1.03
LHX1-202ENST00000616237 IFIT5Q13325 482 aaKnown RBP21.49■■□□□ 1.03
LHX1-202ENST00000616237 KCNQ5Q9NR82 932 aa21.49■■□□□ 1.03
LHX1-202ENST00000616237 ATP2B4P23634 1241 aa21.48■■□□□ 1.03
LHX1-202ENST00000616237 EPHX2P34913 555 aa21.48■■□□□ 1.03
LHX1-202ENST00000616237 CIAPIN1Q6FI81 312 aa21.48■■□□□ 1.03
LHX1-202ENST00000616237 ZNF594Q96JF6 807 aaPredicted RBP21.48■■□□□ 1.03
LHX1-202ENST00000616237 MPHOSPH8Q99549 860 aa21.48■■□□□ 1.03
LHX1-202ENST00000616237 ZC3H12CQ9C0D7 883 aaKnown RBP21.48■■□□□ 1.03
LHX1-202ENST00000616237 ECE2O60344 883 aa21.48■■□□□ 1.03
LHX1-202ENST00000616237 EPS15P42566 896 aa21.48■■□□□ 1.03
LHX1-202ENST00000616237 RABL6Q3YEC7 729 aaPredicted RBP21.48■■□□□ 1.03
LHX1-202ENST00000616237 ANKRD44Q8N8A2 993 aa21.48■■□□□ 1.03
LHX1-202ENST00000616237 API5Q9BZZ5 524 aaKnown RBP21.48■■□□□ 1.03
LHX1-202ENST00000616237 BICC1Q9H694 974 aaKnown RBP21.48■■□□□ 1.03
LHX1-202ENST00000616237 CCT4P50991 539 aaKnown RBP21.47■■□□□ 1.03
LHX1-202ENST00000616237 TNNQ9UQP3 1299 aa21.47■■□□□ 1.03
LHX1-202ENST00000616237 KIF16BQ96L93 1317 aa21.46■■□□□ 1.03
LHX1-202ENST00000616237 GMPSP49915 693 aaPredicted RBP21.46■■□□□ 1.03
LHX1-202ENST00000616237 CHRNDQ07001 517 aa21.46■■□□□ 1.03
LHX1-202ENST00000616237 CCDC57Q2TAC2 916 aa21.46■■□□□ 1.03
LHX1-202ENST00000616237 ARHGAP45Q92619 1136 aa21.46■■□□□ 1.03
LHX1-202ENST00000616237 SCN9AQ15858 1988 aa21.45■■□□□ 1.03
LHX1-202ENST00000616237 ADAMTSL1Q8N6G6 1762 aa21.45■■□□□ 1.03
LHX1-202ENST00000616237 EAPPQ56P03 285 aaPredicted RBP21.45■■□□□ 1.02
LHX1-202ENST00000616237 TXNRD3Q86VQ6 643 aa21.45■■□□□ 1.02
LHX1-202ENST00000616237 GPRC5DQ9NZD1 345 aa21.45■■□□□ 1.02
LHX1-202ENST00000616237 SNAP23O00161 211 aa21.44■■□□□ 1.02
LHX1-202ENST00000616237 PSMD14O00487 310 aa21.44■■□□□ 1.02
LHX1-202ENST00000616237 KLRK1P26718 216 aa21.44■■□□□ 1.02
LHX1-202ENST00000616237 TNIP1Q15025 636 aa21.44■■□□□ 1.02
LHX1-202ENST00000616237 CHADLQ6NUI6 762 aa21.44■■□□□ 1.02
LHX1-202ENST00000616237 LDHDQ86WU2 507 aa21.44■■□□□ 1.02
LHX1-202ENST00000616237 ANKRD2Q9GZV1 360 aa21.44■■□□□ 1.02
LHX1-202ENST00000616237 LEMD3Q9Y2U8 911 aa21.44■■□□□ 1.02
LHX1-202ENST00000616237 ZBTB12Q9Y330 459 aaPredicted RBP21.44■■□□□ 1.02
LHX1-202ENST00000616237 MED23Q9ULK4 1368 aa21.44■■□□□ 1.02
LHX1-202ENST00000616237 SHTN1A0MZ66 631 aa21.43■■□□□ 1.02
LHX1-202ENST00000616237 TAF5LO75529 589 aa21.43■■□□□ 1.02
LHX1-202ENST00000616237 LMOD1P29536 600 aaPredicted RBP21.43■■□□□ 1.02
LHX1-202ENST00000616237 HELBQ8NG08 1087 aaPredicted RBP21.43■■□□□ 1.02
LHX1-202ENST00000616237 ZNF804BA4D1E1 1349 aa21.42■■□□□ 1.02
LHX1-202ENST00000616237 TRIM27P14373 513 aa21.42■■□□□ 1.02
LHX1-202ENST00000616237 LDHAL6AQ6ZMR3 332 aa21.42■■□□□ 1.02
LHX1-202ENST00000616237 PNMA8AQ86V59 439 aaPredicted RBP21.42■■□□□ 1.02
LHX1-202ENST00000616237 PUS3Q9BZE2 481 aaKnown RBP21.42■■□□□ 1.02
LHX1-202ENST00000616237 IRS2Q9Y4H2 1338 aa21.41■■□□□ 1.02
LHX1-202ENST00000616237 A0A1B0GUL6 1792 aa21.41■■□□□ 1.02
LHX1-202ENST00000616237 HTRA3P83110 453 aa21.41■■□□□ 1.02
LHX1-202ENST00000616237 TAF7LQ5H9L4 462 aa21.41■■□□□ 1.02
LHX1-202ENST00000616237 INTS3Q68E01 1043 aaKnown RBP21.41■■□□□ 1.02
LHX1-202ENST00000616237 FRAT1Q92837 279 aaPredicted RBP21.41■■□□□ 1.02
LHX1-202ENST00000616237 APLP1P51693 650 aa21.4■■□□□ 1.02
LHX1-202ENST00000616237 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
LHX1-202ENST00000616237 CNNM1Q9NRU3 951 aa21.4■■□□□ 1.02
LHX1-202ENST00000616237 G3V3G9 751 aa21.39■■□□□ 1.02
LHX1-202ENST00000616237 VIL1P09327 827 aaKnown RBP21.39■■□□□ 1.02
LHX1-202ENST00000616237 DCAF8Q5TAQ9 597 aa21.39■■□□□ 1.02
LHX1-202ENST00000616237 KLHDC4Q8TBB5 520 aa21.39■■□□□ 1.02
LHX1-202ENST00000616237 MEIS3Q99687 375 aa21.39■■□□□ 1.02
LHX1-202ENST00000616237 ADARB2Q9NS39 739 aaKnown RBP21.39■■□□□ 1.02
LHX1-202ENST00000616237 CNOT7Q9UIV1 285 aaKnown RBP21.39■■□□□ 1.02
LHX1-202ENST00000616237 CLEC11AQ9Y240 323 aa21.39■■□□□ 1.02
LHX1-202ENST00000616237 IPO8O15397 1037 aaKnown RBP21.38■■□□□ 1.01
LHX1-202ENST00000616237 ITGBL1O95965 494 aaPredicted RBP21.38■■□□□ 1.01
LHX1-202ENST00000616237 UBTFL1P0CB47 393 aaPredicted RBP21.38■■□□□ 1.01
LHX1-202ENST00000616237 USP50Q70EL3 339 aaPredicted RBP21.38■■□□□ 1.01
LHX1-202ENST00000616237 PODNQ7Z5L7 613 aa21.38■■□□□ 1.01
LHX1-202ENST00000616237 DPF2Q92785 391 aa21.38■■□□□ 1.01
LHX1-202ENST00000616237 RIPOR2Q9Y4F9 1068 aa21.38■■□□□ 1.01
LHX1-202ENST00000616237 RFX5P48382 616 aaPredicted RBP21.37■■□□□ 1.01
LHX1-202ENST00000616237 HIRAP54198 1017 aaPredicted RBP21.37■■□□□ 1.01
LHX1-202ENST00000616237 LRRC24Q50LG9 513 aa21.37■■□□□ 1.01
LHX1-202ENST00000616237 MAP1SQ66K74 1059 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms