RNA–Protein interactions for RNA: ENST00000616230.1

PCDHGC3-203, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-203ENST00000616230 RIMBP2O15034 1052 aa15.63■□□□□ 0.09
PCDHGC3-203ENST00000616230 RAD17O75943 681 aa15.63■□□□□ 0.09
PCDHGC3-203ENST00000616230 ITGBL1O95965 494 aaPredicted RBP15.63■□□□□ 0.09
PCDHGC3-203ENST00000616230 TNIP1Q15025 636 aa15.63■□□□□ 0.09
PCDHGC3-203ENST00000616230 BEND3Q5T5X7 828 aa15.63■□□□□ 0.09
PCDHGC3-203ENST00000616230 GPRC5DQ9NZD1 345 aa15.63■□□□□ 0.09
PCDHGC3-203ENST00000616230 A0A1B0GUL6 1792 aa15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 UFL1O94874 794 aa15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 GMPSP49915 693 aaPredicted RBP15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 SLFN5Q08AF3 891 aa15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 USP50Q70EL3 339 aaPredicted RBP15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 GPR101Q96P66 508 aaPredicted RBP15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 DBNDD1Q9H9R9 158 aa15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 BSDC1Q9NW68 430 aaPredicted RBP15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 ANKIB1Q9P2G1 1089 aa15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 GGA1Q9UJY5 639 aa15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 XDHP47989 1333 aa15.62■□□□□ 0.09
PCDHGC3-203ENST00000616230 TRPM7Q96QT4 1865 aa15.61■□□□□ 0.09
PCDHGC3-203ENST00000616230 ECE2O60344 883 aa15.61■□□□□ 0.09
PCDHGC3-203ENST00000616230 CSF1RP07333 972 aa15.61■□□□□ 0.09
PCDHGC3-203ENST00000616230 MAP1SQ66K74 1059 aaPredicted RBP15.61■□□□□ 0.09
PCDHGC3-203ENST00000616230 JMYQ8N9B5 988 aa15.61■□□□□ 0.09
PCDHGC3-203ENST00000616230 ADARB2Q9NS39 739 aaKnown RBP15.61■□□□□ 0.09
PCDHGC3-203ENST00000616230 PSMD14O00487 310 aa15.6■□□□□ 0.09
PCDHGC3-203ENST00000616230 DOK7Q18PE1 504 aa15.6■□□□□ 0.09
PCDHGC3-203ENST00000616230 CNTROBQ8N137 903 aa15.6■□□□□ 0.09
PCDHGC3-203ENST00000616230 ZC3H12CQ9C0D7 883 aaKnown RBP15.6■□□□□ 0.09
PCDHGC3-203ENST00000616230 ZNF646O15015 1829 aaPredicted RBP15.59■□□□□ 0.09
PCDHGC3-203ENST00000616230 ITGA6P23229 1130 aa15.59■□□□□ 0.09
PCDHGC3-203ENST00000616230 ATP2B4P23634 1241 aa15.59■□□□□ 0.09
PCDHGC3-203ENST00000616230 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
PCDHGC3-203ENST00000616230 MRPL50Q8N5N7 158 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-203ENST00000616230 BCL2L13Q9BXK5 485 aa15.59■□□□□ 0.09
PCDHGC3-203ENST00000616230 MINPP1Q9UNW1 487 aa15.59■□□□□ 0.09
PCDHGC3-203ENST00000616230 GRM8O00222 908 aa15.58■□□□□ 0.08
PCDHGC3-203ENST00000616230 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-203ENST00000616230 FOXO4P98177 505 aa15.58■□□□□ 0.08
PCDHGC3-203ENST00000616230 TRMT2AQ8IZ69 625 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-203ENST00000616230 DPF2Q92785 391 aa15.58■□□□□ 0.08
PCDHGC3-203ENST00000616230 CDCA7LQ96GN5 454 aa15.58■□□□□ 0.08
PCDHGC3-203ENST00000616230 KCNQ5Q9NR82 932 aa15.58■□□□□ 0.08
PCDHGC3-203ENST00000616230 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
PCDHGC3-203ENST00000616230 ALDH1L1O75891 902 aa15.57■□□□□ 0.08
PCDHGC3-203ENST00000616230 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-203ENST00000616230 SLC4A10Q6U841 1118 aa15.57■□□□□ 0.08
PCDHGC3-203ENST00000616230 CNOT7Q9UIV1 285 aaKnown RBP15.57■□□□□ 0.08
PCDHGC3-203ENST00000616230 MED23Q9ULK4 1368 aa15.57■□□□□ 0.08
PCDHGC3-203ENST00000616230 SHTN1A0MZ66 631 aa15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 TMEM88BA6NKF7 163 aa15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 G3V3G9 751 aa15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 RPS12P25398 132 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 CCT4P50991 539 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 DCAF8Q5TAQ9 597 aa15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 MICALL2Q8IY33 904 aa15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 SSH1Q8WYL5 1049 aa15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 SRCIN1Q9C0H9 1055 aa15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 PTPRCP08575 1304 aa15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 ZNF609O15014 1411 aa15.56■□□□□ 0.08
PCDHGC3-203ENST00000616230 CNTNAP1P78357 1384 aa15.55■□□□□ 0.08
PCDHGC3-203ENST00000616230 ANKRD18BA2A2Z9 1011 aa15.55■□□□□ 0.08
PCDHGC3-203ENST00000616230 WTIPA6NIX2 430 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-203ENST00000616230 VIL1P09327 827 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-203ENST00000616230 HIRAP54198 1017 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-203ENST00000616230 TRPM4Q8TD43 1214 aa15.55■□□□□ 0.08
PCDHGC3-203ENST00000616230 MPHOSPH8Q99549 860 aa15.55■□□□□ 0.08
PCDHGC3-203ENST00000616230 C9orf78Q9NZ63 289 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-203ENST00000616230 PGAP2Q9UHJ9 254 aa15.55■□□□□ 0.08
PCDHGC3-203ENST00000616230 H7C1D1 291 aa15.54■□□□□ 0.08
PCDHGC3-203ENST00000616230 ALDH1L2Q3SY69 923 aa15.54■□□□□ 0.08
PCDHGC3-203ENST00000616230 EPHA10Q5JZY3 1008 aa15.54■□□□□ 0.08
PCDHGC3-203ENST00000616230 ZC3H15Q8WU90 426 aaKnown RBP15.54■□□□□ 0.08
PCDHGC3-203ENST00000616230 MKRN1Q9UHC7 482 aaKnown RBP15.54■□□□□ 0.08
PCDHGC3-203ENST00000616230 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
PCDHGC3-203ENST00000616230 POLR2AP24928 1970 aaKnown RBP15.53■□□□□ 0.08
PCDHGC3-203ENST00000616230 UTYO14607 1347 aa15.53■□□□□ 0.08
PCDHGC3-203ENST00000616230 FMR1Q06787 632 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHGC3-203ENST00000616230 IFIT5Q13325 482 aaKnown RBP15.53■□□□□ 0.08
PCDHGC3-203ENST00000616230 LMBR1LQ6UX01 489 aa15.53■□□□□ 0.08
PCDHGC3-203ENST00000616230 PODNQ7Z5L7 613 aa15.53■□□□□ 0.08
PCDHGC3-203ENST00000616230 ANKRD2Q9GZV1 360 aa15.53■□□□□ 0.08
PCDHGC3-203ENST00000616230 CHMP3Q9Y3E7 222 aa15.53■□□□□ 0.08
PCDHGC3-203ENST00000616230 ZNF804BA4D1E1 1349 aa15.52■□□□□ 0.08
PCDHGC3-203ENST00000616230 CT47B1P0C2W7 299 aaPredicted RBP15.52■□□□□ 0.08
PCDHGC3-203ENST00000616230 CHRNDQ07001 517 aa15.52■□□□□ 0.08
PCDHGC3-203ENST00000616230 RSBN1LQ6PCB5 846 aaPredicted RBP15.52■□□□□ 0.08
PCDHGC3-203ENST00000616230 SAMD7Q7Z3H4 446 aa15.52■□□□□ 0.08
PCDHGC3-203ENST00000616230 SUCLG2Q96I99 432 aa15.52■□□□□ 0.08
PCDHGC3-203ENST00000616230 TRAF5O00463 557 aa15.51■□□□□ 0.07
PCDHGC3-203ENST00000616230 EGFRP00533 1210 aa15.51■□□□□ 0.07
PCDHGC3-203ENST00000616230 NBPF7P0C2Y1 421 aaPredicted RBP15.51■□□□□ 0.07
PCDHGC3-203ENST00000616230 TXNRD3Q86VQ6 643 aa15.51■□□□□ 0.07
PCDHGC3-203ENST00000616230 AGBL3Q8NEM8 1001 aa15.51■□□□□ 0.07
PCDHGC3-203ENST00000616230 KAZALD1Q96I82 304 aa15.51■□□□□ 0.07
PCDHGC3-203ENST00000616230 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
PCDHGC3-203ENST00000616230 USP17L3A6NCW0 530 aa15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 USP17L4A6NCW7 530 aa15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 RASSF10A6NK89 507 aa15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 CCDC57Q2TAC2 916 aa15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 TBC1D10BQ4KMP7 808 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms