RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 OPHN1O60890 802 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 AFAP1L1Q8TED9 768 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 PIP4K2BP78356 416 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 NCAPGQ9BPX3 1015 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 TMX1Q9H3N1 280 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 LMNB2Q03252 620 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 PLEKHO1Q53GL0 409 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-211ENST00000615798 SCINQ9Y6U3 715 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 KDM5DQ9BY66 1539 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 IFI16Q16666 785 aaKnown RBP10.53□□□□□ -0.72
COL12A1-211ENST00000615798 CABP2Q9NPB3 220 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 PALM3A6NDB9 673 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-211ENST00000615798 MAP3K21Q5TCX8 1036 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 PAWRQ96IZ0 340 aaKnown RBP10.53□□□□□ -0.72
COL12A1-211ENST00000615798 SLC12A5Q9H2X9 1139 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 CCDC61Q9Y6R9 512 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 GIGYF1O75420 1035 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-211ENST00000615798 CCDC62Q6P9F0 684 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 SPDL1Q96EA4 605 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 RABEP2Q9H5N1 569 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 PAIP2BQ9ULR5 123 aaKnown RBP10.53□□□□□ -0.72
COL12A1-211ENST00000615798 E9PMD0 336 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 SBNO2Q9Y2G9 1366 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 ELL2O00472 640 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-211ENST00000615798 PRAM1Q96QH2 718 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 SPECC1L-ADORA2AF8WAN1 911 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 ATP2A2P16615 1042 aaKnown RBP10.53□□□□□ -0.72
COL12A1-211ENST00000615798 HS1BP3Q53T59 392 aa10.53□□□□□ -0.72
COL12A1-211ENST00000615798 MUM1Q2TAK8 710 aa10.52□□□□□ -0.72
COL12A1-211ENST00000615798 SSX2IPQ9Y2D8 614 aa10.52□□□□□ -0.72
COL12A1-211ENST00000615798 YEATS4O95619 227 aa10.52□□□□□ -0.72
COL12A1-211ENST00000615798 HMGB2P26583 209 aaKnown RBP10.52□□□□□ -0.72
COL12A1-211ENST00000615798 CCDC57Q2TAC2 916 aa10.52□□□□□ -0.72
COL12A1-211ENST00000615798 ZNF280CQ8ND82 737 aa10.52□□□□□ -0.72
COL12A1-211ENST00000615798 BCAP29Q9UHQ4 241 aa10.52□□□□□ -0.72
COL12A1-211ENST00000615798 SYCE3A1L190 88 aa10.52□□□□□ -0.72
COL12A1-211ENST00000615798 NEK4P51957 841 aa10.52□□□□□ -0.72
COL12A1-211ENST00000615798 CYP46A1Q9Y6A2 500 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 BASP1P80723 227 aaKnown RBP10.52□□□□□ -0.73
COL12A1-211ENST00000615798 SPAG5Q96R06 1193 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 HAUS8Q9BT25 410 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 EIF4G3O43432 1585 aaKnown RBP10.52□□□□□ -0.73
COL12A1-211ENST00000615798 SF3B2Q13435 895 aaKnown RBP10.52□□□□□ -0.73
COL12A1-211ENST00000615798 CCDC184Q52MB2 194 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 ABCC2Q92887 1545 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 ATP5DP30049 168 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 NOP14P78316 857 aaKnown RBP10.52□□□□□ -0.73
COL12A1-211ENST00000615798 SH2B1Q9NRF2 756 aaPredicted RBP10.52□□□□□ -0.73
COL12A1-211ENST00000615798 CD109Q6YHK3 1445 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 TXNDC9O14530 226 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 TBC1D32Q96NH3 1257 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 CCDC68Q9H2F9 335 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 PLCB1Q9NQ66 1216 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 ANO10Q9NW15 660 aa10.52□□□□□ -0.73
COL12A1-211ENST00000615798 DENND4BO75064 1496 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-211ENST00000615798 SELENOSQ9BQE4 189 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 ZEB2O60315 1214 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 PHLDB3Q6NSJ2 640 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 ARMCX6Q7L4S7 300 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 RAB11FIP4Q86YS3 637 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 THEMISQ8N1K5 641 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-211ENST00000615798 SNX21Q969T3 373 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 SELENOOQ9BVL4 669 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 DISP3Q9P2K9 1392 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 BIRC2Q13490 618 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 RAPGEF4Q8WZA2 1011 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 JAKMIP2Q96AA8 810 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 FERMT1Q9BQL6 677 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 WWC3Q9ULE0 1092 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 FLOT2Q14254 428 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 CDK19Q9BWU1 502 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 BMP2KQ9NSY1 1161 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-211ENST00000615798 APLFQ8IW19 511 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-211ENST00000615798 TRMT1Q9NXH9 659 aaKnown RBP10.51□□□□□ -0.73
COL12A1-211ENST00000615798 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 IRAK4Q9NWZ3 460 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 FBXO2Q9UK22 296 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-211ENST00000615798 HMGB3O15347 200 aaKnown RBP10.51□□□□□ -0.73
COL12A1-211ENST00000615798 MCUR1Q96AQ8 359 aa10.51□□□□□ -0.73
COL12A1-211ENST00000615798 FYB2Q5VWT5 728 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 HIP1RO75146 1068 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 CCDC159P0C7I6 412 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 CTNNA2P26232 953 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 ZC3H6P61129 1189 aaKnown RBP10.5□□□□□ -0.73
COL12A1-211ENST00000615798 TRIM55Q9BYV6 548 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 TACC3Q9Y6A5 838 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 KDM5AP29375 1690 aaKnown RBP10.5□□□□□ -0.73
COL12A1-211ENST00000615798 ERCC5P28715 1186 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-211ENST00000615798 SYTL4Q96C24 671 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-211ENST00000615798 SPATA32Q96LK8 384 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 UVSSAQ2YD98 709 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 CACNA2D4Q7Z3S7 1137 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 PPP1R9AQ9ULJ8 1098 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 GKAP1Q5VSY0 366 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-211ENST00000615798 NUDCD3Q8IVD9 361 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 RPGRIP1Q96KN7 1286 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 SPATA31E1Q6ZUB1 1445 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 PRKG1Q13976 671 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 PSMD6Q15008 389 aa10.5□□□□□ -0.73
COL12A1-211ENST00000615798 SNCBQ16143 134 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms