RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 IGHMBP2P38935 993 aaKnown RBP21.09■□□□□ 0.97
CBWD3-211ENST00000615061 CCT4P50991 539 aaKnown RBP21.09■□□□□ 0.97
CBWD3-211ENST00000615061 NIM1KQ8IY84 436 aa21.09■□□□□ 0.97
CBWD3-211ENST00000615061 PODXL2Q9NZ53 605 aa21.09■□□□□ 0.97
CBWD3-211ENST00000615061 IFIT5Q13325 482 aaKnown RBP21.08■□□□□ 0.97
CBWD3-211ENST00000615061 WASHC4Q2M389 1173 aa21.08■□□□□ 0.97
CBWD3-211ENST00000615061 ZNF594Q96JF6 807 aaPredicted RBP21.08■□□□□ 0.97
CBWD3-211ENST00000615061 VPS33BQ9H267 617 aa21.08■□□□□ 0.97
CBWD3-211ENST00000615061 UFL1O94874 794 aa21.08■□□□□ 0.96
CBWD3-211ENST00000615061 C1QTNF8P60827 252 aa21.08■□□□□ 0.96
CBWD3-211ENST00000615061 CLUAP1Q96AJ1 413 aa21.08■□□□□ 0.96
CBWD3-211ENST00000615061 ATF7IPQ6VMQ6 1270 aa21.07■□□□□ 0.96
CBWD3-211ENST00000615061 ANKRD44Q8N8A2 993 aa21.07■□□□□ 0.96
CBWD3-211ENST00000615061 MPHOSPH8Q99549 860 aa21.07■□□□□ 0.96
CBWD3-211ENST00000615061 GGA1Q9UJY5 639 aa21.07■□□□□ 0.96
CBWD3-211ENST00000615061 XDHP47989 1333 aa21.07■□□□□ 0.96
CBWD3-211ENST00000615061 VEGFAP15692 232 aaPredicted RBP21.06■□□□□ 0.96
CBWD3-211ENST00000615061 EIF6P56537 245 aaKnown RBP21.06■□□□□ 0.96
CBWD3-211ENST00000615061 GJA3Q9Y6H8 435 aa21.06■□□□□ 0.96
CBWD3-211ENST00000615061 YDJCA8MPS7 323 aa21.05■□□□□ 0.96
CBWD3-211ENST00000615061 IPO8O15397 1037 aaKnown RBP21.05■□□□□ 0.96
CBWD3-211ENST00000615061 CCDC57Q2TAC2 916 aa21.05■□□□□ 0.96
CBWD3-211ENST00000615061 DBNDD1Q9H9R9 158 aa21.05■□□□□ 0.96
CBWD3-211ENST00000615061 ZNRF3Q9ULT6 936 aa21.05■□□□□ 0.96
CBWD3-211ENST00000615061 A0A1B0GUL6 1792 aa21.05■□□□□ 0.96
CBWD3-211ENST00000615061 SCN9AQ15858 1988 aa21.05■□□□□ 0.96
CBWD3-211ENST00000615061 RABL6Q3YEC7 729 aaPredicted RBP21.05■□□□□ 0.96
CBWD3-211ENST00000615061 CXCL9Q07325 125 aa21.04■□□□□ 0.96
CBWD3-211ENST00000615061 DOK7Q18PE1 504 aa21.04■□□□□ 0.96
CBWD3-211ENST00000615061 INTS3Q68E01 1043 aaKnown RBP21.04■□□□□ 0.96
CBWD3-211ENST00000615061 GPC2Q8N158 579 aa21.04■□□□□ 0.96
CBWD3-211ENST00000615061 L3MBTL3Q96JM7 780 aaPredicted RBP21.04■□□□□ 0.96
CBWD3-211ENST00000615061 MEIS3Q99687 375 aa21.04■□□□□ 0.96
CBWD3-211ENST00000615061 RAD17O75943 681 aa21.03■□□□□ 0.96
CBWD3-211ENST00000615061 TOMM70O94826 608 aa21.03■□□□□ 0.96
CBWD3-211ENST00000615061 CHRNDQ07001 517 aa21.03■□□□□ 0.96
CBWD3-211ENST00000615061 ZKSCAN2Q63HK3 967 aa21.03■□□□□ 0.96
CBWD3-211ENST00000615061 EYA3Q99504 573 aa21.03■□□□□ 0.96
CBWD3-211ENST00000615061 SCN4AP35499 1836 aa21.03■□□□□ 0.96
CBWD3-211ENST00000615061 TAF7LQ5H9L4 462 aa21.02■□□□□ 0.96
CBWD3-211ENST00000615061 C16orf71Q8IYS4 520 aaPredicted RBP21.02■□□□□ 0.96
CBWD3-211ENST00000615061 HELBQ8NG08 1087 aaPredicted RBP21.02■□□□□ 0.96
CBWD3-211ENST00000615061 ZC3H12CQ9C0D7 883 aaKnown RBP21.02■□□□□ 0.96
CBWD3-211ENST00000615061 SNAP23O00161 211 aa21.02■□□□□ 0.96
CBWD3-211ENST00000615061 UBTFL1P0CB47 393 aaPredicted RBP21.02■□□□□ 0.96
CBWD3-211ENST00000615061 ATP2B4P23634 1241 aa21.02■□□□□ 0.96
CBWD3-211ENST00000615061 KCNQ5Q9NR82 932 aa21.02■□□□□ 0.96
CBWD3-211ENST00000615061 TAF5LO75529 589 aa21.01■□□□□ 0.95
CBWD3-211ENST00000615061 LDHAL6AQ6ZMR3 332 aa21.01■□□□□ 0.95
CBWD3-211ENST00000615061 PUS3Q9BZE2 481 aaKnown RBP21.01■□□□□ 0.95
CBWD3-211ENST00000615061 ECE2O60344 883 aa21■□□□□ 0.95
CBWD3-211ENST00000615061 POTEIP0CG38 1075 aa21■□□□□ 0.95
CBWD3-211ENST00000615061 POTEJP0CG39 1038 aa21■□□□□ 0.95
CBWD3-211ENST00000615061 KLRK1P26718 216 aa21■□□□□ 0.95
CBWD3-211ENST00000615061 TMEM57Q8N5G2 664 aa21■□□□□ 0.95
CBWD3-211ENST00000615061 KLHDC4Q8TBB5 520 aa21■□□□□ 0.95
CBWD3-211ENST00000615061 YTHDC1Q96MU7 727 aaKnown RBP21■□□□□ 0.95
CBWD3-211ENST00000615061 CIAPIN1Q6FI81 312 aa21■□□□□ 0.95
CBWD3-211ENST00000615061 TXNRD3Q86VQ6 643 aa21■□□□□ 0.95
CBWD3-211ENST00000615061 LRRFIP2Q9Y608 721 aaKnown RBP21■□□□□ 0.95
CBWD3-211ENST00000615061 SCNN1DP51172 638 aa20.99■□□□□ 0.95
CBWD3-211ENST00000615061 ANKRD2Q9GZV1 360 aa20.99■□□□□ 0.95
CBWD3-211ENST00000615061 TAF1DQ9H5J8 278 aaPredicted RBP20.99■□□□□ 0.95
CBWD3-211ENST00000615061 CNNM1Q9NRU3 951 aa20.99■□□□□ 0.95
CBWD3-211ENST00000615061 ZNF804BA4D1E1 1349 aa20.98■□□□□ 0.95
CBWD3-211ENST00000615061 IQCA1LA6NCM1 817 aa20.98■□□□□ 0.95
CBWD3-211ENST00000615061 RLBP1P12271 317 aa20.98■□□□□ 0.95
CBWD3-211ENST00000615061 RBM46Q8TBY0 533 aaKnown RBP20.98■□□□□ 0.95
CBWD3-211ENST00000615061 PLIN1O60240 522 aa20.97■□□□□ 0.95
CBWD3-211ENST00000615061 HACL1Q9UJ83 578 aa20.97■□□□□ 0.95
CBWD3-211ENST00000615061 LEMD3Q9Y2U8 911 aa20.97■□□□□ 0.95
CBWD3-211ENST00000615061 MED23Q9ULK4 1368 aa20.97■□□□□ 0.95
CBWD3-211ENST00000615061 PSMD14O00487 310 aa20.97■□□□□ 0.95
CBWD3-211ENST00000615061 EPS15P42566 896 aa20.97■□□□□ 0.95
CBWD3-211ENST00000615061 G3V3G9 751 aa20.96■□□□□ 0.95
CBWD3-211ENST00000615061 EPHX2P34913 555 aa20.96■□□□□ 0.95
CBWD3-211ENST00000615061 RFX5P48382 616 aaPredicted RBP20.96■□□□□ 0.95
CBWD3-211ENST00000615061 GMPSP49915 693 aaPredicted RBP20.96■□□□□ 0.95
CBWD3-211ENST00000615061 LRRC24Q50LG9 513 aa20.96■□□□□ 0.95
CBWD3-211ENST00000615061 DCAF8Q5TAQ9 597 aa20.96■□□□□ 0.95
CBWD3-211ENST00000615061 ZBTB12Q9Y330 459 aaPredicted RBP20.96■□□□□ 0.95
CBWD3-211ENST00000615061 KCNJ4P48050 445 aa20.95■□□□□ 0.94
CBWD3-211ENST00000615061 FTSJ3Q8IY81 847 aaKnown RBP20.95■□□□□ 0.94
CBWD3-211ENST00000615061 RIPOR2Q9Y4F9 1068 aa20.95■□□□□ 0.94
CBWD3-211ENST00000615061 PSME4Q14997 1843 aa20.95■□□□□ 0.94
CBWD3-211ENST00000615061 TNIP1Q15025 636 aa20.95■□□□□ 0.94
CBWD3-211ENST00000615061 EAPPQ56P03 285 aaPredicted RBP20.95■□□□□ 0.94
CBWD3-211ENST00000615061 DZIP1LQ8IYY4 767 aaKnown RBP20.95■□□□□ 0.94
CBWD3-211ENST00000615061 RCAN3Q9UKA8 241 aa20.95■□□□□ 0.94
CBWD3-211ENST00000615061 SHTN1A0MZ66 631 aa20.94■□□□□ 0.94
CBWD3-211ENST00000615061 GNAI3P08754 354 aa20.94■□□□□ 0.94
CBWD3-211ENST00000615061 IRS2Q9Y4H2 1338 aa20.94■□□□□ 0.94
CBWD3-211ENST00000615061 LMOD1P29536 600 aaPredicted RBP20.93■□□□□ 0.94
CBWD3-211ENST00000615061 PTPN12Q05209 780 aaKnown RBP20.93■□□□□ 0.94
CBWD3-211ENST00000615061 GPRC5DQ9NZD1 345 aa20.93■□□□□ 0.94
CBWD3-211ENST00000615061 SMC1BQ8NDV3 1235 aa20.92■□□□□ 0.94
CBWD3-211ENST00000615061 PANK1Q8TE04 598 aa20.92■□□□□ 0.94
CBWD3-211ENST00000615061 ADAMTSL1Q8N6G6 1762 aa20.92■□□□□ 0.94
CBWD3-211ENST00000615061 ITPRIPQ8IWB1 547 aa20.92■□□□□ 0.94
CBWD3-211ENST00000615061 ZNF646O15015 1829 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms