RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 Q6ZUG5 572 aa23.54■■□□□ 1.36
SMARCD2-212ENST00000613943 TMEM87AQ8NBN3 555 aa23.54■■□□□ 1.36
SMARCD2-212ENST00000613943 CEP126Q9P2H0 1117 aa23.53■■□□□ 1.36
SMARCD2-212ENST00000613943 SCARF1Q14162 830 aa23.53■■□□□ 1.36
SMARCD2-212ENST00000613943 PI16Q6UXB8 463 aa23.53■■□□□ 1.36
SMARCD2-212ENST00000613943 U3KPZ7 1027 aaPredicted RBP23.53■■□□□ 1.36
SMARCD2-212ENST00000613943 PPFIA3O75145 1194 aa23.52■■□□□ 1.36
SMARCD2-212ENST00000613943 HSP90B1P14625 803 aaKnown RBP23.52■■□□□ 1.36
SMARCD2-212ENST00000613943 CLCN1P35523 988 aa23.52■■□□□ 1.36
SMARCD2-212ENST00000613943 ANKRD1Q15327 319 aa23.52■■□□□ 1.36
SMARCD2-212ENST00000613943 ZBTB1Q9Y2K1 713 aa23.52■■□□□ 1.36
SMARCD2-212ENST00000613943 STARD3NLO95772 234 aa23.51■■□□□ 1.35
SMARCD2-212ENST00000613943 TAF7LQ5H9L4 462 aa23.51■■□□□ 1.35
SMARCD2-212ENST00000613943 SH3TC1Q8TE82 1336 aa23.51■■□□□ 1.35
SMARCD2-212ENST00000613943 M0R2C6 588 aa23.51■■□□□ 1.35
SMARCD2-212ENST00000613943 GPR108Q9NPR9 543 aa23.51■■□□□ 1.35
SMARCD2-212ENST00000613943 MAST3O60307 1309 aa23.51■■□□□ 1.35
SMARCD2-212ENST00000613943 PALLDQ8WX93 1383 aa23.51■■□□□ 1.35
SMARCD2-212ENST00000613943 CIAO1O76071 339 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 GORABQ5T7V8 394 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 CHST3Q7LGC8 479 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 BRF1Q92994 677 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 SYAP1Q96A49 352 aaPredicted RBP23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 XAGE2Q96GT9 111 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 TSPY26PQ9H489 355 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 UBE2HP62256 183 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 TTLL5Q6EMB2 1281 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 ATP6V1DQ9Y5K8 247 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 RFX7Q2KHR2 1363 aa23.5■■□□□ 1.35
SMARCD2-212ENST00000613943 KRT32Q14532 448 aa23.49■■□□□ 1.35
SMARCD2-212ENST00000613943 ZMYM1Q5SVZ6 1142 aa23.49■■□□□ 1.35
SMARCD2-212ENST00000613943 MAP3K15Q6ZN16 1313 aa23.49■■□□□ 1.35
SMARCD2-212ENST00000613943 ZBTB38Q8NAP3 1195 aaPredicted RBP23.49■■□□□ 1.35
SMARCD2-212ENST00000613943 DDX11Q96FC9 970 aa23.49■■□□□ 1.35
SMARCD2-212ENST00000613943 TBC1D2BQ9UPU7 963 aa23.49■■□□□ 1.35
SMARCD2-212ENST00000613943 PCCAP05165 728 aaPredicted RBP23.49■■□□□ 1.35
SMARCD2-212ENST00000613943 HSPD1P10809 573 aaKnown RBP23.49■■□□□ 1.35
SMARCD2-212ENST00000613943 GREM2Q9H772 168 aa23.49■■□□□ 1.35
SMARCD2-212ENST00000613943 FGD1P98174 961 aa23.48■■□□□ 1.35
SMARCD2-212ENST00000613943 IFIT5Q13325 482 aaKnown RBP23.48■■□□□ 1.35
SMARCD2-212ENST00000613943 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
SMARCD2-212ENST00000613943 OSBP2Q969R2 916 aa23.48■■□□□ 1.35
SMARCD2-212ENST00000613943 NHSL1Q5SYE7 1610 aa23.48■■□□□ 1.35
SMARCD2-212ENST00000613943 FOSBP53539 338 aa23.48■■□□□ 1.35
SMARCD2-212ENST00000613943 GIGYF2Q6Y7W6 1299 aaKnown RBP23.48■■□□□ 1.35
SMARCD2-212ENST00000613943 NLRP10Q86W26 655 aa23.48■■□□□ 1.35
SMARCD2-212ENST00000613943 CYP19A1P11511 503 aaPredicted RBP23.47■■□□□ 1.35
SMARCD2-212ENST00000613943 VSIG10Q8N0Z9 540 aa23.47■■□□□ 1.35
SMARCD2-212ENST00000613943 GTF3C6Q969F1 213 aa23.47■■□□□ 1.35
SMARCD2-212ENST00000613943 HELLSQ9NRZ9 838 aa23.47■■□□□ 1.35
SMARCD2-212ENST00000613943 RNF113AO15541 343 aaKnown RBP23.47■■□□□ 1.35
SMARCD2-212ENST00000613943 ALDH8A1Q9H2A2 487 aaPredicted RBP23.47■■□□□ 1.35
SMARCD2-212ENST00000613943 ZAP70P43403 619 aa23.46■■□□□ 1.35
SMARCD2-212ENST00000613943 SCRN1Q12765 414 aa23.46■■□□□ 1.35
SMARCD2-212ENST00000613943 CCDC183Q5T5S1 534 aa23.46■■□□□ 1.35
SMARCD2-212ENST00000613943 TTC6Q86TZ1 520 aa23.46■■□□□ 1.35
SMARCD2-212ENST00000613943 TEX13AQ9BXU3 409 aaPredicted RBP23.46■■□□□ 1.35
SMARCD2-212ENST00000613943 TFIP11Q9UBB9 837 aaKnown RBP23.46■■□□□ 1.35
SMARCD2-212ENST00000613943 ITGA6P23229 1130 aa23.45■■□□□ 1.35
SMARCD2-212ENST00000613943 TRIM28Q13263 835 aaKnown RBP23.45■■□□□ 1.35
SMARCD2-212ENST00000613943 CCDC158Q5M9N0 1113 aa23.45■■□□□ 1.35
SMARCD2-212ENST00000613943 GIMAP6Q6P9H5 292 aa23.45■■□□□ 1.35
SMARCD2-212ENST00000613943 CSF1RP07333 972 aa23.45■■□□□ 1.34
SMARCD2-212ENST00000613943 APOBRQ0VD83 1088 aa23.45■■□□□ 1.34
SMARCD2-212ENST00000613943 WASHC4Q2M389 1173 aa23.45■■□□□ 1.34
SMARCD2-212ENST00000613943 NAP1L2Q9ULW6 460 aaPredicted RBP23.45■■□□□ 1.34
SMARCD2-212ENST00000613943 BCL9O00512 1426 aa23.45■■□□□ 1.34
SMARCD2-212ENST00000613943 HAND2P61296 217 aa23.44■■□□□ 1.34
SMARCD2-212ENST00000613943 TTLL11Q8NHH1 800 aa23.44■■□□□ 1.34
SMARCD2-212ENST00000613943 PDLIM2Q96JY6 352 aa23.44■■□□□ 1.34
SMARCD2-212ENST00000613943 FAM177BA6PVY3 158 aa23.44■■□□□ 1.34
SMARCD2-212ENST00000613943 EXOC5O00471 708 aa23.44■■□□□ 1.34
SMARCD2-212ENST00000613943 ADAMTS2O95450 1211 aa23.44■■□□□ 1.34
SMARCD2-212ENST00000613943 METTL24Q5JXM2 366 aa23.44■■□□□ 1.34
SMARCD2-212ENST00000613943 LDHAL6AQ6ZMR3 332 aa23.44■■□□□ 1.34
SMARCD2-212ENST00000613943 DISP2A7MBM2 1401 aa23.43■■□□□ 1.34
SMARCD2-212ENST00000613943 E7EWF7 191 aa23.43■■□□□ 1.34
SMARCD2-212ENST00000613943 CCT2P78371 535 aaKnown RBP23.43■■□□□ 1.34
SMARCD2-212ENST00000613943 DSCC1Q9BVC3 393 aa23.43■■□□□ 1.34
SMARCD2-212ENST00000613943 TRMT112Q9UI30 125 aaKnown RBP23.43■■□□□ 1.34
SMARCD2-212ENST00000613943 PHF14O94880 888 aa23.43■■□□□ 1.34
SMARCD2-212ENST00000613943 HCLS1P14317 486 aaPredicted RBP23.43■■□□□ 1.34
SMARCD2-212ENST00000613943 ITGB4P16144 1822 aa23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 IRS4O14654 1257 aaPredicted RBP23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 FOXP2O15409 715 aa23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 ACSBG1Q96GR2 724 aa23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 NCOA5Q9HCD5 579 aaKnown RBP23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 GPHNQ9NQX3 736 aaPredicted RBP23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 PDCP20941 246 aa23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 DHX32Q7L7V1 743 aaKnown RBP23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 MPNDQ8N594 471 aa23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 PLA2G12BQ9BX93 195 aa23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 PUS7LQ9H0K6 701 aaKnown RBP23.42■■□□□ 1.34
SMARCD2-212ENST00000613943 RIC1Q4ADV7 1423 aa23.41■■□□□ 1.34
SMARCD2-212ENST00000613943 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.41■■□□□ 1.34
SMARCD2-212ENST00000613943 CTSWP56202 376 aa23.41■■□□□ 1.34
SMARCD2-212ENST00000613943 KRT85P78386 507 aa23.41■■□□□ 1.34
SMARCD2-212ENST00000613943 AKAP2Q9Y2D5 859 aa23.41■■□□□ 1.34
SMARCD2-212ENST00000613943 RIPOR2Q9Y4F9 1068 aa23.41■■□□□ 1.34
SMARCD2-212ENST00000613943 UBN2Q6ZU65 1347 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms