RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 USP54Q70EL1 1684 aa10.96□□□□□ -0.65
CCL3-205ENST00000613928 RASA1P20936 1047 aa10.96□□□□□ -0.65
CCL3-205ENST00000613928 RRP1P56182 461 aaKnown RBP10.96□□□□□ -0.65
CCL3-205ENST00000613928 CYP4X1Q8N118 509 aa10.96□□□□□ -0.65
CCL3-205ENST00000613928 USP21Q9UK80 565 aa10.96□□□□□ -0.65
CCL3-205ENST00000613928 EP400Q96L91 3159 aa10.96□□□□□ -0.66
CCL3-205ENST00000613928 TTC24A2A3L6 582 aaPredicted RBP10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L10C9JJH3 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L12C9JPN9 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L21D6R901 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 E9PSI1 815 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 TMPOP42166 694 aaKnown RBP10.95□□□□□ -0.66
CCL3-205ENST00000613928 PRR20EP86478 221 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 PRR20CP86479 221 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 PRR20DP86480 221 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 PRR20BP86481 221 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 PRR20AP86496 221 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 ELOAQ14241 798 aaKnown RBP10.95□□□□□ -0.66
CCL3-205ENST00000613928 WDR63Q8IWG1 891 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 PGPEP1Q9NXJ5 209 aa10.95□□□□□ -0.66
CCL3-205ENST00000613928 C1orf167Q5SNV9 1468 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 TNFRSF10AO00220 468 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 NNTQ13423 1086 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 ESCO1Q5FWF5 840 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
CCL3-205ENST00000613928 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 OGFOD1Q8N543 542 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 ORAI2Q96SN7 254 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 PPP4R2Q9NY27 417 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
CCL3-205ENST00000613928 USTQ9Y2C2 406 aa10.94□□□□□ -0.66
CCL3-205ENST00000613928 ATRNO75882 1429 aa10.93□□□□□ -0.66
CCL3-205ENST00000613928 MAP3K19Q56UN5 1328 aa10.93□□□□□ -0.66
CCL3-205ENST00000613928 MAPK8IP3Q9UPT6 1336 aa10.93□□□□□ -0.66
CCL3-205ENST00000613928 NR3C2P08235 984 aa10.93□□□□□ -0.66
CCL3-205ENST00000613928 HMOX1P09601 288 aa10.93□□□□□ -0.66
CCL3-205ENST00000613928 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
CCL3-205ENST00000613928 PRKAR2BP31323 418 aa10.93□□□□□ -0.66
CCL3-205ENST00000613928 GTF2IP78347 998 aa10.93□□□□□ -0.66
CCL3-205ENST00000613928 EIF4A2Q14240 407 aaKnown RBP10.93□□□□□ -0.66
CCL3-205ENST00000613928 PNNQ9H307 717 aaKnown RBP10.93□□□□□ -0.66
CCL3-205ENST00000613928 DNAAF2Q9NVR5 837 aaKnown RBP10.93□□□□□ -0.66
CCL3-205ENST00000613928 COL22A1Q8NFW1 1626 aaPredicted RBP10.92□□□□□ -0.66
CCL3-205ENST00000613928 MYT1Q01538 1121 aa10.92□□□□□ -0.66
CCL3-205ENST00000613928 PTK7Q13308 1070 aa10.92□□□□□ -0.66
CCL3-205ENST00000613928 CRTC2Q53ET0 693 aaPredicted RBP10.92□□□□□ -0.66
CCL3-205ENST00000613928 HSP90AB2PQ58FF8 381 aa10.92□□□□□ -0.66
CCL3-205ENST00000613928 NUTM2GQ5VZR2 741 aa10.92□□□□□ -0.66
CCL3-205ENST00000613928 LARGE2Q8N3Y3 721 aa10.92□□□□□ -0.66
CCL3-205ENST00000613928 ZNF784Q8NCA9 323 aaPredicted RBP10.92□□□□□ -0.66
CCL3-205ENST00000613928 TMPRSS4Q9NRS4 437 aa10.92□□□□□ -0.66
CCL3-205ENST00000613928 TOR4AQ9NXH8 423 aa10.92□□□□□ -0.66
CCL3-205ENST00000613928 NOVA2Q9UNW9 492 aaKnown RBP10.92□□□□□ -0.66
CCL3-205ENST00000613928 RIPK4P57078 832 aa10.91□□□□□ -0.66
CCL3-205ENST00000613928 CLDN10P78369 228 aa10.91□□□□□ -0.66
CCL3-205ENST00000613928 ABTB2Q8N961 1025 aa10.91□□□□□ -0.66
CCL3-205ENST00000613928 PHACTR3Q96KR7 559 aa10.91□□□□□ -0.66
CCL3-205ENST00000613928 CYLDQ9NQC7 956 aa10.91□□□□□ -0.66
CCL3-205ENST00000613928 SBNO1A3KN83 1393 aa10.9□□□□□ -0.66
CCL3-205ENST00000613928 RGPD1P0DJD0 1748 aa10.9□□□□□ -0.66
CCL3-205ENST00000613928 SCTRP47872 440 aa10.9□□□□□ -0.66
CCL3-205ENST00000613928 PSME1Q06323 249 aa10.9□□□□□ -0.66
CCL3-205ENST00000613928 TRIM67Q6ZTA4 783 aa10.9□□□□□ -0.66
CCL3-205ENST00000613928 RBM19Q9Y4C8 960 aaKnown RBP10.9□□□□□ -0.66
CCL3-205ENST00000613928 FLT4P35916 1363 aa10.9□□□□□ -0.67
CCL3-205ENST00000613928 SOS2Q07890 1332 aaPredicted RBP10.89□□□□□ -0.67
CCL3-205ENST00000613928 BRWD3Q6RI45 1802 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 J3QL48 77 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 PLIN1O60240 522 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 NFE2L2Q16236 605 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 AEBP1Q8IUX7 1158 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 SIX5Q8N196 739 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 ZNF594Q96JF6 807 aaPredicted RBP10.89□□□□□ -0.67
CCL3-205ENST00000613928 TRAIPQ9BWF2 469 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 ZMIZ1Q9ULJ6 1067 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 PCDHGA11Q9Y5H2 935 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 TRPM3Q9HCF6 1732 aaPredicted RBP10.89□□□□□ -0.67
CCL3-205ENST00000613928 KIF1AQ12756 1690 aa10.89□□□□□ -0.67
CCL3-205ENST00000613928 FOXO3O43524 673 aa10.88□□□□□ -0.67
CCL3-205ENST00000613928 B4GALNT3Q6L9W6 998 aa10.88□□□□□ -0.67
CCL3-205ENST00000613928 ANKMY2Q8IV38 441 aa10.88□□□□□ -0.67
CCL3-205ENST00000613928 EXOC6Q8TAG9 804 aa10.88□□□□□ -0.67
CCL3-205ENST00000613928 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
CCL3-205ENST00000613928 IL16Q14005 1332 aa10.87□□□□□ -0.67
CCL3-205ENST00000613928 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.87□□□□□ -0.67
CCL3-205ENST00000613928 LILRA1O75019 489 aa10.87□□□□□ -0.67
CCL3-205ENST00000613928 HOXC9P31274 260 aa10.87□□□□□ -0.67
CCL3-205ENST00000613928 AMPHP49418 695 aa10.87□□□□□ -0.67
CCL3-205ENST00000613928 XPCQ01831 940 aaPredicted RBP10.87□□□□□ -0.67
CCL3-205ENST00000613928 CCDC102BQ68D86 513 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms