RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 RTFDC1Q9BY42 306 aaPredicted RBP16.52■□□□□ 0.24
MDC1-209ENST00000613547 GGA1Q9UJY5 639 aa16.52■□□□□ 0.24
MDC1-209ENST00000613547 SNED1Q8TER0 1413 aa16.52■□□□□ 0.23
MDC1-209ENST00000613547 COL4A1P02462 1669 aa16.51■□□□□ 0.23
MDC1-209ENST00000613547 ATP2B4P23634 1241 aa16.51■□□□□ 0.23
MDC1-209ENST00000613547 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
MDC1-209ENST00000613547 SLC51AQ86UW1 340 aa16.51■□□□□ 0.23
MDC1-209ENST00000613547 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
MDC1-209ENST00000613547 C1orf115Q9H7X2 142 aa16.51■□□□□ 0.23
MDC1-209ENST00000613547 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
MDC1-209ENST00000613547 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
MDC1-209ENST00000613547 FBXO3Q9UK99 471 aa16.51■□□□□ 0.23
MDC1-209ENST00000613547 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
MDC1-209ENST00000613547 LRRC37AA6NMS7 1700 aa16.5■□□□□ 0.23
MDC1-209ENST00000613547 MROH5Q6ZUA9 1318 aa16.5■□□□□ 0.23
MDC1-209ENST00000613547 PPIP5K2O43314 1243 aa16.5■□□□□ 0.23
MDC1-209ENST00000613547 UFL1O94874 794 aa16.5■□□□□ 0.23
MDC1-209ENST00000613547 KCNJ4P48050 445 aa16.5■□□□□ 0.23
MDC1-209ENST00000613547 RFX5P48382 616 aaPredicted RBP16.5■□□□□ 0.23
MDC1-209ENST00000613547 CHRNDQ07001 517 aa16.5■□□□□ 0.23
MDC1-209ENST00000613547 LARGE2Q8N3Y3 721 aa16.5■□□□□ 0.23
MDC1-209ENST00000613547 LEMD3Q9Y2U8 911 aa16.5■□□□□ 0.23
MDC1-209ENST00000613547 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
MDC1-209ENST00000613547 ZC3H4Q9UPT8 1303 aaKnown RBP16.49■□□□□ 0.23
MDC1-209ENST00000613547 EYA2O00167 538 aa16.49■□□□□ 0.23
MDC1-209ENST00000613547 ATP8B2P98198 1209 aa16.49■□□□□ 0.23
MDC1-209ENST00000613547 PTPN12Q05209 780 aaKnown RBP16.49■□□□□ 0.23
MDC1-209ENST00000613547 WASHC4Q2M389 1173 aa16.49■□□□□ 0.23
MDC1-209ENST00000613547 KLHDC4Q8TBB5 520 aa16.49■□□□□ 0.23
MDC1-209ENST00000613547 TBC1D16Q8TBP0 767 aa16.49■□□□□ 0.23
MDC1-209ENST00000613547 G3V3G9 751 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 HMMRO75330 724 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 CIAO1O76071 339 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
MDC1-209ENST00000613547 KIAA2012Q0VF49 1180 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 AOC3Q16853 763 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 METTL24Q5JXM2 366 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 RPAP2Q8IXW5 612 aaPredicted RBP16.48■□□□□ 0.23
MDC1-209ENST00000613547 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
MDC1-209ENST00000613547 ZC3H12CQ9C0D7 883 aaKnown RBP16.48■□□□□ 0.23
MDC1-209ENST00000613547 SIL1Q9H173 461 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 POLLQ9UGP5 575 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 FER1L6Q2WGJ9 1857 aa16.48■□□□□ 0.23
MDC1-209ENST00000613547 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
MDC1-209ENST00000613547 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
MDC1-209ENST00000613547 NIM1KQ8IY84 436 aa16.47■□□□□ 0.23
MDC1-209ENST00000613547 RIPOR2Q9Y4F9 1068 aa16.47■□□□□ 0.23
MDC1-209ENST00000613547 TAF1P21675 1872 aa16.47■□□□□ 0.23
MDC1-209ENST00000613547 ZNF804BA4D1E1 1349 aa16.46■□□□□ 0.23
MDC1-209ENST00000613547 YY1P25490 414 aa16.46■□□□□ 0.23
MDC1-209ENST00000613547 IL15P40933 162 aaPredicted RBP16.46■□□□□ 0.23
MDC1-209ENST00000613547 PRELPP51888 382 aa16.46■□□□□ 0.23
MDC1-209ENST00000613547 LRRC24Q50LG9 513 aa16.46■□□□□ 0.23
MDC1-209ENST00000613547 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.23
MDC1-209ENST00000613547 SSH3Q8TE77 659 aa16.46■□□□□ 0.23
MDC1-209ENST00000613547 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
MDC1-209ENST00000613547 PA2G4Q9UQ80 394 aaKnown RBP16.46■□□□□ 0.23
MDC1-209ENST00000613547 RIMBP2O15034 1052 aa16.45■□□□□ 0.22
MDC1-209ENST00000613547 TAF5LO75529 589 aa16.45■□□□□ 0.22
MDC1-209ENST00000613547 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
MDC1-209ENST00000613547 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
MDC1-209ENST00000613547 AAMPQ13685 434 aa16.45■□□□□ 0.22
MDC1-209ENST00000613547 POLA2Q14181 598 aa16.45■□□□□ 0.22
MDC1-209ENST00000613547 CEP126Q9P2H0 1117 aa16.45■□□□□ 0.22
MDC1-209ENST00000613547 MED23Q9ULK4 1368 aa16.45■□□□□ 0.22
MDC1-209ENST00000613547 DUOX1Q9NRD9 1551 aa16.45■□□□□ 0.22
MDC1-209ENST00000613547 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
MDC1-209ENST00000613547 DPY19L2Q6NUT2 758 aa16.44■□□□□ 0.22
MDC1-209ENST00000613547 PDE8BO95263 885 aa16.43■□□□□ 0.22
MDC1-209ENST00000613547 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
MDC1-209ENST00000613547 ATG9AQ7Z3C6 839 aa16.43■□□□□ 0.22
MDC1-209ENST00000613547 GPR101Q96P66 508 aaPredicted RBP16.43■□□□□ 0.22
MDC1-209ENST00000613547 ZNRF3Q9ULT6 936 aa16.43■□□□□ 0.22
MDC1-209ENST00000613547 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
MDC1-209ENST00000613547 UTRNP46939 3433 aa16.42■□□□□ 0.22
MDC1-209ENST00000613547 SURF6O75683 361 aaKnown RBP16.42■□□□□ 0.22
MDC1-209ENST00000613547 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
MDC1-209ENST00000613547 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
MDC1-209ENST00000613547 KDM2BQ8NHM5 1336 aa16.42■□□□□ 0.22
MDC1-209ENST00000613547 LTBP1Q14766 1721 aa16.42■□□□□ 0.22
MDC1-209ENST00000613547 FZD9O00144 591 aa16.41■□□□□ 0.22
MDC1-209ENST00000613547 IFIT1P09914 478 aaKnown RBP16.41■□□□□ 0.22
MDC1-209ENST00000613547 C15orf52Q6ZUT6 534 aaKnown RBP16.41■□□□□ 0.22
MDC1-209ENST00000613547 ZNF804AQ7Z570 1209 aa16.41■□□□□ 0.22
MDC1-209ENST00000613547 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
MDC1-209ENST00000613547 AKAP2Q9Y2D5 859 aa16.41■□□□□ 0.22
MDC1-209ENST00000613547 ECE2O60344 883 aa16.4■□□□□ 0.22
MDC1-209ENST00000613547 SLC5A1P13866 664 aa16.4■□□□□ 0.22
MDC1-209ENST00000613547 ATP2B3Q16720 1220 aa16.4■□□□□ 0.22
MDC1-209ENST00000613547 DOK7Q18PE1 504 aa16.4■□□□□ 0.22
MDC1-209ENST00000613547 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
MDC1-209ENST00000613547 VGLL2Q8N8G2 317 aa16.4■□□□□ 0.22
MDC1-209ENST00000613547 LPIN2Q92539 896 aa16.4■□□□□ 0.22
MDC1-209ENST00000613547 DBNDD1Q9H9R9 158 aa16.4■□□□□ 0.22
MDC1-209ENST00000613547 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
MDC1-209ENST00000613547 CHD4Q14839 1912 aa16.39■□□□□ 0.21
MDC1-209ENST00000613547 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
MDC1-209ENST00000613547 SNAP23O00161 211 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms