RNA–Protein interactions for RNA: ENST00000612674.1

USP12-202, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 2

Gene USP12, Length 712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-202ENST00000612674 FAM229AH3BQW9 127 aa9.56□□□□□ -0.88
USP12-202ENST00000612674 SIN3BO75182 1162 aa9.56□□□□□ -0.88
USP12-202ENST00000612674 PRRT3Q5FWE3 981 aa9.56□□□□□ -0.88
USP12-202ENST00000612674 WASHC2CQ9Y4E1 1318 aa9.56□□□□□ -0.88
USP12-202ENST00000612674 M0R082 166 aa9.55□□□□□ -0.88
USP12-202ENST00000612674 EML1O00423 815 aa9.55□□□□□ -0.88
USP12-202ENST00000612674 BACH1O14867 736 aa9.55□□□□□ -0.88
USP12-202ENST00000612674 SFSWAPQ12872 951 aaKnown RBP9.55□□□□□ -0.88
USP12-202ENST00000612674 MEX3CQ5U5Q3 659 aaKnown RBP9.55□□□□□ -0.88
USP12-202ENST00000612674 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
USP12-202ENST00000612674 ZNF417Q8TAU3 575 aa9.55□□□□□ -0.88
USP12-202ENST00000612674 ZNF587Q96SQ5 575 aaPredicted RBP9.55□□□□□ -0.88
USP12-202ENST00000612674 SLC30A3Q99726 388 aa9.55□□□□□ -0.88
USP12-202ENST00000612674 ZNF358Q9NW07 568 aa9.55□□□□□ -0.88
USP12-202ENST00000612674 CDK12Q9NYV4 1490 aaPredicted RBP9.54□□□□□ -0.88
USP12-202ENST00000612674 DHX29Q7Z478 1369 aaKnown RBP9.54□□□□□ -0.88
USP12-202ENST00000612674 LRP6O75581 1613 aa9.54□□□□□ -0.88
USP12-202ENST00000612674 COL16A1Q07092 1604 aaPredicted RBP9.54□□□□□ -0.88
USP12-202ENST00000612674 KIF3BO15066 747 aa9.54□□□□□ -0.88
USP12-202ENST00000612674 NOS2P35228 1153 aa9.54□□□□□ -0.88
USP12-202ENST00000612674 SOX11P35716 441 aa9.54□□□□□ -0.88
USP12-202ENST00000612674 EPHA4P54764 986 aa9.54□□□□□ -0.88
USP12-202ENST00000612674 TEAD4Q15561 434 aa9.54□□□□□ -0.88
USP12-202ENST00000612674 C8orf86Q6ZUL3 223 aa9.54□□□□□ -0.88
USP12-202ENST00000612674 PRDM6Q9NQX0 595 aa9.54□□□□□ -0.88
USP12-202ENST00000612674 TMEM94Q12767 1356 aa9.53□□□□□ -0.88
USP12-202ENST00000612674 MAP3K1Q13233 1512 aa9.53□□□□□ -0.88
USP12-202ENST00000612674 APBA3O96018 575 aa9.53□□□□□ -0.88
USP12-202ENST00000612674 ALBP02768 609 aa9.53□□□□□ -0.88
USP12-202ENST00000612674 RXRBP28702 533 aa9.53□□□□□ -0.88
USP12-202ENST00000612674 EML3Q32P44 896 aa9.53□□□□□ -0.88
USP12-202ENST00000612674 CFDP1Q9UEE9 299 aaPredicted RBP9.53□□□□□ -0.88
USP12-202ENST00000612674 RTEL1-TNFRSF6BF6WH68 1400 aa9.53□□□□□ -0.88
USP12-202ENST00000612674 SHPRHQ149N8 1683 aa9.52□□□□□ -0.89
USP12-202ENST00000612674 DYRK3O43781 588 aa9.52□□□□□ -0.89
USP12-202ENST00000612674 GTF2IP78347 998 aa9.52□□□□□ -0.89
USP12-202ENST00000612674 TBCELQ5QJ74 424 aa9.52□□□□□ -0.89
USP12-202ENST00000612674 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
USP12-202ENST00000612674 MICALL1Q8N3F8 863 aa9.52□□□□□ -0.89
USP12-202ENST00000612674 CASKIN1Q8WXD9 1431 aa9.52□□□□□ -0.89
USP12-202ENST00000612674 TNFRSF25Q93038 417 aa9.52□□□□□ -0.89
USP12-202ENST00000612674 SPATA31A6Q5VVP1 1343 aa9.52□□□□□ -0.89
USP12-202ENST00000612674 TIAM1Q13009 1591 aa9.51□□□□□ -0.89
USP12-202ENST00000612674 SH3PXD2AQ5TCZ1 1133 aa9.51□□□□□ -0.89
USP12-202ENST00000612674 SLC9A9Q8IVB4 645 aa9.51□□□□□ -0.89
USP12-202ENST00000612674 NOD1Q9Y239 953 aa9.51□□□□□ -0.89
USP12-202ENST00000612674 SLIT1O75093 1534 aa9.51□□□□□ -0.89
USP12-202ENST00000612674 CCNB3Q8WWL7 1395 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 FGD6Q6ZV73 1430 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 SCO2A0A1W2PP80 73 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 SKIP12755 728 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 NID1P14543 1247 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
USP12-202ENST00000612674 PSME1Q06323 249 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 GRIK4Q16099 956 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 TNS4Q8IZW8 715 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 ZNF232Q9UNY5 417 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 ERVK-7P63135 1459 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 ARHGAP23Q9P227 1491 aa9.5□□□□□ -0.89
USP12-202ENST00000612674 CEP152O94986 1710 aa9.49□□□□□ -0.89
USP12-202ENST00000612674 TRIM28Q13263 835 aaKnown RBP9.49□□□□□ -0.89
USP12-202ENST00000612674 NCOA4Q13772 614 aa9.49□□□□□ -0.89
USP12-202ENST00000612674 TXNDC2Q86VQ3 553 aa9.49□□□□□ -0.89
USP12-202ENST00000612674 NEUROD4Q9HD90 331 aa9.49□□□□□ -0.89
USP12-202ENST00000612674 GPC6Q9Y625 555 aaPredicted RBP9.49□□□□□ -0.89
USP12-202ENST00000612674 PRDM15P57071 1507 aaPredicted RBP9.49□□□□□ -0.89
USP12-202ENST00000612674 MSH6P52701 1360 aa9.49□□□□□ -0.89
USP12-202ENST00000612674 NCOA2Q15596 1464 aa9.48□□□□□ -0.89
USP12-202ENST00000612674 FYCO1Q9BQS8 1478 aa9.48□□□□□ -0.89
USP12-202ENST00000612674 MBD5Q9P267 1494 aa9.48□□□□□ -0.89
USP12-202ENST00000612674 ABCC3O15438 1527 aa9.48□□□□□ -0.89
USP12-202ENST00000612674 LTKP29376 864 aa9.48□□□□□ -0.89
USP12-202ENST00000612674 ADH7P40394 386 aa9.48□□□□□ -0.89
USP12-202ENST00000612674 SPEM2Q0P670 501 aa9.48□□□□□ -0.89
USP12-202ENST00000612674 C20orf204Q6ZNR8 217 aa9.48□□□□□ -0.89
USP12-202ENST00000612674 RAB44Q7Z6P3 723 aaPredicted RBP9.48□□□□□ -0.89
USP12-202ENST00000612674 EID1Q9Y6B2 187 aa9.48□□□□□ -0.89
USP12-202ENST00000612674 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
USP12-202ENST00000612674 NWD1Q149M9 1564 aa9.47□□□□□ -0.89
USP12-202ENST00000612674 SETBP1Q9Y6X0 1596 aa9.47□□□□□ -0.89
USP12-202ENST00000612674 LZTS3O60299 673 aaPredicted RBP9.47□□□□□ -0.89
USP12-202ENST00000612674 PRSS36Q5K4E3 855 aa9.47□□□□□ -0.89
USP12-202ENST00000612674 PROSER2Q86WR7 435 aaPredicted RBP9.47□□□□□ -0.89
USP12-202ENST00000612674 NACC1Q96RE7 527 aa9.47□□□□□ -0.89
USP12-202ENST00000612674 KDM5AP29375 1690 aaKnown RBP9.47□□□□□ -0.89
USP12-202ENST00000612674 RGS12O14924 1447 aa9.47□□□□□ -0.89
USP12-202ENST00000612674 SERTM1A2A2V5 107 aa9.46□□□□□ -0.9
USP12-202ENST00000612674 KCNA6P17658 529 aa9.46□□□□□ -0.9
USP12-202ENST00000612674 ARTNQ5T4W7 220 aa9.46□□□□□ -0.9
USP12-202ENST00000612674 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.9
USP12-202ENST00000612674 RHPN1Q8TCX5 695 aa9.46□□□□□ -0.9
USP12-202ENST00000612674 ALG2Q9H553 416 aa9.46□□□□□ -0.9
USP12-202ENST00000612674 SLAIN2Q9P270 581 aa9.46□□□□□ -0.9
USP12-202ENST00000612674 CCDC141Q6ZP82 1450 aa9.46□□□□□ -0.9
USP12-202ENST00000612674 PIK3C2BO00750 1634 aa9.45□□□□□ -0.9
USP12-202ENST00000612674 DEPDC4Q8N2C3 294 aa9.45□□□□□ -0.9
USP12-202ENST00000612674 HSH2DQ96JZ2 352 aa9.45□□□□□ -0.9
USP12-202ENST00000612674 ZFP64Q9NPA5 681 aa9.45□□□□□ -0.9
USP12-202ENST00000612674 ZNF644Q9H582 1327 aaPredicted RBP9.45□□□□□ -0.9
USP12-202ENST00000612674 AHDC1Q5TGY3 1603 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms