RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 GPATCH3Q96I76 525 aa13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 CCDC57Q2TAC2 916 aa13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 TNNI3KQ59H18 835 aa13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 ZNF34Q8IZ26 560 aa13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 CCNL1Q9UK58 526 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 CNPY2Q9Y2B0 182 aa13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 FPGT-TNNI3KV9GXZ4 949 aa13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 TTC41PQ6P2S7 1318 aa13.39□□□□□ -0.27
CSPG4P10-202ENST00000612093 USP42Q9H9J4 1324 aaKnown RBP13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 CEBPZQ03701 1054 aaKnown RBP13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 SUSD4Q5VX71 490 aa13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 DBNLQ9UJU6 430 aaKnown RBP13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 ANKRD36CQ5JPF3 1778 aa13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 DDIT3P35638 169 aa13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 GREM2Q9H772 168 aa13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 NIP7Q9Y221 180 aaKnown RBP eCLIP13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
CSPG4P10-202ENST00000612093 COL5A3P25940 1745 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P10-202ENST00000612093 KDM4AO75164 1064 aa13.37□□□□□ -0.27
CSPG4P10-202ENST00000612093 TAF7LQ5H9L4 462 aa13.37□□□□□ -0.27
CSPG4P10-202ENST00000612093 GIMAP6Q6P9H5 292 aa13.37□□□□□ -0.27
CSPG4P10-202ENST00000612093 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
CSPG4P10-202ENST00000612093 NECAB1Q8N987 351 aa13.37□□□□□ -0.27
CSPG4P10-202ENST00000612093 DBNDD2Q9BQY9 259 aa13.37□□□□□ -0.27
CSPG4P10-202ENST00000612093 NEUROD6Q96NK8 337 aa13.37□□□□□ -0.27
CSPG4P10-202ENST00000612093 EYA2O00167 538 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 GNPATO15228 680 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 IFIT5Q13325 482 aaKnown RBP13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 AMIGO3Q86WK7 504 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 TTLL11Q8NHH1 800 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 EDC3Q96F86 508 aaKnown RBP13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 NHSQ6T4R5 1651 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 RRP9O43818 475 aaKnown RBP13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 CTSWP56202 376 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 TIMM10P62072 90 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 CDHR2Q9BYE9 1310 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 RREB1Q92766 1687 aa13.36□□□□□ -0.27
CSPG4P10-202ENST00000612093 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
CSPG4P10-202ENST00000612093 CSF1RP07333 972 aa13.35□□□□□ -0.27
CSPG4P10-202ENST00000612093 ITGA6P23229 1130 aa13.35□□□□□ -0.27
CSPG4P10-202ENST00000612093 USP48Q86UV5 1035 aa13.35□□□□□ -0.27
CSPG4P10-202ENST00000612093 SRP68Q9UHB9 627 aaKnown RBP13.35□□□□□ -0.27
CSPG4P10-202ENST00000612093 IL15P40933 162 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P10-202ENST00000612093 CCDC83Q8IWF9 413 aa13.35□□□□□ -0.27
CSPG4P10-202ENST00000612093 DRC7Q8IY82 874 aa13.35□□□□□ -0.27
CSPG4P10-202ENST00000612093 UTP14AQ9BVJ6 771 aaKnown RBP13.35□□□□□ -0.27
CSPG4P10-202ENST00000612093 CICQ96RK0 1608 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P10-202ENST00000612093 PHF14O94880 888 aa13.34□□□□□ -0.27
CSPG4P10-202ENST00000612093 MCCP23508 829 aa13.34□□□□□ -0.27
CSPG4P10-202ENST00000612093 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
CSPG4P10-202ENST00000612093 SH3TC1Q8TE82 1336 aa13.34□□□□□ -0.27
CSPG4P10-202ENST00000612093 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
CSPG4P10-202ENST00000612093 NPHP1O15259 732 aa13.34□□□□□ -0.27
CSPG4P10-202ENST00000612093 PDE8AO60658 829 aa13.34□□□□□ -0.27
CSPG4P10-202ENST00000612093 CBX1P83916 185 aa13.34□□□□□ -0.27
CSPG4P10-202ENST00000612093 TRIM37O94972 964 aa13.33□□□□□ -0.27
CSPG4P10-202ENST00000612093 KRT27Q7Z3Y8 459 aa13.33□□□□□ -0.27
CSPG4P10-202ENST00000612093 A0A087WWV3 80 aa13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 DNAJC2Q99543 621 aaKnown RBP13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 LDHAL6AQ6ZMR3 332 aa13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 TSPY26PQ9H489 355 aa13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 DIAPH3Q9NSV4 1193 aa13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 CEP126Q9P2H0 1117 aa13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 ZNF652Q9Y2D9 606 aa13.33□□□□□ -0.28
CSPG4P10-202ENST00000612093 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 ZNF592Q92610 1267 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 BRWD3Q6RI45 1802 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 A0A1B0GUL7 405 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 NTSR2O95665 410 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 EVI5LQ96CN4 794 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 FSD1Q9BTV5 496 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 MYH3P11055 1940 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 RPS6KA4O75676 772 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 CIAO1O76071 339 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 PARP10Q53GL7 1025 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 CNNM1Q9NRU3 951 aa13.32□□□□□ -0.28
CSPG4P10-202ENST00000612093 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P10-202ENST00000612093 TBC1D9BQ66K14 1250 aa13.31□□□□□ -0.28
CSPG4P10-202ENST00000612093 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
CSPG4P10-202ENST00000612093 SEC31BQ9NQW1 1179 aa13.31□□□□□ -0.28
CSPG4P10-202ENST00000612093 RTCBQ9Y3I0 505 aaKnown RBP13.31□□□□□ -0.28
CSPG4P10-202ENST00000612093 SRCAPQ6ZRS2 3230 aa13.31□□□□□ -0.28
CSPG4P10-202ENST00000612093 ADORA1P30542 326 aa13.31□□□□□ -0.28
CSPG4P10-202ENST00000612093 CCDC24Q8N4L8 307 aa13.31□□□□□ -0.28
CSPG4P10-202ENST00000612093 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
CSPG4P10-202ENST00000612093 SGSM2O43147 1006 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms