RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 CASP8AP2Q9UKL3 1982 aa17.27■□□□□ 0.36
HMGB1P24-201ENST00000611897 EGFRP00533 1210 aa17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 HUNKP57058 714 aa17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 GNAI1P63096 354 aa17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 KRT26Q7Z3Y9 468 aa17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 ZBTB38Q8NAP3 1195 aaPredicted RBP17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 TBC1D16Q8TBP0 767 aa17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 RTL9Q8NET4 1388 aa17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 SPEF2Q9C093 1822 aa17.26■□□□□ 0.35
HMGB1P24-201ENST00000611897 ADM5C9JUS6 153 aa17.25■□□□□ 0.35
HMGB1P24-201ENST00000611897 MAP2K2P36507 400 aa17.25■□□□□ 0.35
HMGB1P24-201ENST00000611897 CALD1Q05682 793 aaKnown RBP17.25■□□□□ 0.35
HMGB1P24-201ENST00000611897 ZC3H12CQ9C0D7 883 aaKnown RBP17.25■□□□□ 0.35
HMGB1P24-201ENST00000611897 PGAP2Q9UHJ9 254 aa17.25■□□□□ 0.35
HMGB1P24-201ENST00000611897 CCDC85CA6NKD9 419 aa17.24■□□□□ 0.35
HMGB1P24-201ENST00000611897 TRIM28Q13263 835 aaKnown RBP17.24■□□□□ 0.35
HMGB1P24-201ENST00000611897 KIF4BQ2VIQ3 1234 aa17.24■□□□□ 0.35
HMGB1P24-201ENST00000611897 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
HMGB1P24-201ENST00000611897 DPF2Q92785 391 aa17.24■□□□□ 0.35
HMGB1P24-201ENST00000611897 DCPSQ96C86 337 aaKnown RBP17.24■□□□□ 0.35
HMGB1P24-201ENST00000611897 CWC25Q9NXE8 425 aaPredicted RBP17.24■□□□□ 0.35
HMGB1P24-201ENST00000611897 GGA1Q9UJY5 639 aa17.24■□□□□ 0.35
HMGB1P24-201ENST00000611897 ZNF853P0CG23 659 aa17.23■□□□□ 0.35
HMGB1P24-201ENST00000611897 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
HMGB1P24-201ENST00000611897 RPS12P25398 132 aaKnown RBP17.23■□□□□ 0.35
HMGB1P24-201ENST00000611897 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
HMGB1P24-201ENST00000611897 GGA3Q9NZ52 723 aa17.23■□□□□ 0.35
HMGB1P24-201ENST00000611897 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
HMGB1P24-201ENST00000611897 PCCAP05165 728 aaPredicted RBP17.22■□□□□ 0.35
HMGB1P24-201ENST00000611897 PDE8AO60658 829 aa17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 NOGQ13253 232 aa17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 HHIPL1Q96JK4 782 aa17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 ZIC5Q96T25 663 aa17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 GBA2Q9HCG7 927 aaPredicted RBP17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 MYH3P11055 1940 aa17.21■□□□□ 0.35
HMGB1P24-201ENST00000611897 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.34
HMGB1P24-201ENST00000611897 CA12O43570 354 aa17.2■□□□□ 0.34
HMGB1P24-201ENST00000611897 FAM161AQ3B820 660 aa17.2■□□□□ 0.34
HMGB1P24-201ENST00000611897 SULF1Q8IWU6 871 aa17.2■□□□□ 0.34
HMGB1P24-201ENST00000611897 TSPYL6Q8N831 410 aa17.2■□□□□ 0.34
HMGB1P24-201ENST00000611897 C2orf69Q8N8R5 385 aa17.2■□□□□ 0.34
HMGB1P24-201ENST00000611897 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
HMGB1P24-201ENST00000611897 FBXW7Q969H0 707 aa17.19■□□□□ 0.34
HMGB1P24-201ENST00000611897 PODXL2Q9NZ53 605 aa17.19■□□□□ 0.34
HMGB1P24-201ENST00000611897 PSME4Q14997 1843 aa17.19■□□□□ 0.34
HMGB1P24-201ENST00000611897 ZNF157P51786 506 aaPredicted RBP17.18■□□□□ 0.34
HMGB1P24-201ENST00000611897 CTSWP56202 376 aa17.18■□□□□ 0.34
HMGB1P24-201ENST00000611897 RGMBQ6NW40 437 aa17.18■□□□□ 0.34
HMGB1P24-201ENST00000611897 STK31Q9BXU1 1019 aa17.18■□□□□ 0.34
HMGB1P24-201ENST00000611897 XDHP47989 1333 aa17.18■□□□□ 0.34
HMGB1P24-201ENST00000611897 PI4KAP2A4QPH2 592 aa17.17■□□□□ 0.34
HMGB1P24-201ENST00000611897 VIL1P09327 827 aaKnown RBP17.17■□□□□ 0.34
HMGB1P24-201ENST00000611897 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
HMGB1P24-201ENST00000611897 RSBN1LQ6PCB5 846 aaPredicted RBP17.17■□□□□ 0.34
HMGB1P24-201ENST00000611897 PI4KAP1Q8N8J0 262 aa17.17■□□□□ 0.34
HMGB1P24-201ENST00000611897 CDC5LQ99459 802 aaKnown RBP17.17■□□□□ 0.34
HMGB1P24-201ENST00000611897 DGKZQ13574 1117 aa17.16■□□□□ 0.34
HMGB1P24-201ENST00000611897 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
HMGB1P24-201ENST00000611897 ANGEL2Q5VTE6 544 aaKnown RBP17.16■□□□□ 0.34
HMGB1P24-201ENST00000611897 CDCA5Q96FF9 252 aa17.16■□□□□ 0.34
HMGB1P24-201ENST00000611897 MCOLN1Q9GZU1 580 aa17.16■□□□□ 0.34
HMGB1P24-201ENST00000611897 SCAF8Q9UPN6 1271 aaKnown RBP17.16■□□□□ 0.34
HMGB1P24-201ENST00000611897 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
HMGB1P24-201ENST00000611897 ATP2B4P23634 1241 aa17.15■□□□□ 0.34
HMGB1P24-201ENST00000611897 KSR2Q6VAB6 950 aa17.15■□□□□ 0.34
HMGB1P24-201ENST00000611897 CHMP4AQ9BY43 222 aa17.15■□□□□ 0.34
HMGB1P24-201ENST00000611897 GREM2Q9H772 168 aa17.15■□□□□ 0.34
HMGB1P24-201ENST00000611897 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
HMGB1P24-201ENST00000611897 IGKV5-2P06315 115 aa17.14■□□□□ 0.33
HMGB1P24-201ENST00000611897 KIF23Q02241 960 aaPredicted RBP17.14■□□□□ 0.33
HMGB1P24-201ENST00000611897 SCARF1Q14162 830 aa17.14■□□□□ 0.33
HMGB1P24-201ENST00000611897 UBE3BQ7Z3V4 1068 aa17.14■□□□□ 0.33
HMGB1P24-201ENST00000611897 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 FAM155AB1AL88 458 aaPredicted RBP17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 USP17L8P0C7I0 530 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 G2E3Q7L622 706 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 CCDC102AQ96A19 550 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 MXD3Q9BW11 206 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 MYOZ2Q9NPC6 264 aa17.13■□□□□ 0.33
HMGB1P24-201ENST00000611897 TRPA1O75762 1119 aa17.12■□□□□ 0.33
HMGB1P24-201ENST00000611897 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
HMGB1P24-201ENST00000611897 TWISTNBQ3B726 338 aaPredicted RBP17.12■□□□□ 0.33
HMGB1P24-201ENST00000611897 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
HMGB1P24-201ENST00000611897 PAPPA2Q9BXP8 1791 aa17.11■□□□□ 0.33
HMGB1P24-201ENST00000611897 NEURL1BA8MQ27 555 aa17.11■□□□□ 0.33
HMGB1P24-201ENST00000611897 SLC10A3P09131 477 aa17.11■□□□□ 0.33
HMGB1P24-201ENST00000611897 MLLT1Q03111 559 aaPredicted RBP17.11■□□□□ 0.33
HMGB1P24-201ENST00000611897 TTLL12Q14166 644 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms