RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 Q6ZUG5 572 aa20.42■□□□□ 0.86
NEK3-206ENST00000611833 ZNF594Q96JF6 807 aaPredicted RBP20.42■□□□□ 0.86
NEK3-206ENST00000611833 GPR108Q9NPR9 543 aa20.42■□□□□ 0.86
NEK3-206ENST00000611833 ADCY5O95622 1261 aa20.42■□□□□ 0.86
NEK3-206ENST00000611833 PALLDQ8WX93 1383 aa20.42■□□□□ 0.86
NEK3-206ENST00000611833 SH3TC1Q8TE82 1336 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 GOLIM4O00461 696 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 FGD1P98174 961 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 SLFNL1Q499Z3 407 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 FUCA2Q9BTY2 467 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 R3HCC1Q9Y3T6 440 aaKnown RBP20.41■□□□□ 0.86
NEK3-206ENST00000611833 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 ELP1O95163 1332 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 EYA2O00167 538 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 GTF3C6Q969F1 213 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 SCAND2PQ9GZW5 306 aaPredicted RBP20.41■□□□□ 0.86
NEK3-206ENST00000611833 PAG1Q9NWQ8 432 aa20.41■□□□□ 0.86
NEK3-206ENST00000611833 GOLGA6L4A6NEF3 574 aa20.4■□□□□ 0.86
NEK3-206ENST00000611833 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.4■□□□□ 0.86
NEK3-206ENST00000611833 SPATA32Q96LK8 384 aa20.39■□□□□ 0.86
NEK3-206ENST00000611833 TFIP11Q9UBB9 837 aaKnown RBP20.39■□□□□ 0.86
NEK3-206ENST00000611833 JAK2O60674 1132 aa20.39■□□□□ 0.85
NEK3-206ENST00000611833 KDM4AO75164 1064 aa20.39■□□□□ 0.85
NEK3-206ENST00000611833 CCDC192P0DO97 292 aa20.39■□□□□ 0.85
NEK3-206ENST00000611833 PLCB2Q00722 1185 aa20.39■□□□□ 0.85
NEK3-206ENST00000611833 PUS3Q9BZE2 481 aaKnown RBP20.39■□□□□ 0.85
NEK3-206ENST00000611833 ISCA1Q9BUE6 129 aa20.38■□□□□ 0.85
NEK3-206ENST00000611833 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
NEK3-206ENST00000611833 A0A1B0GUL7 405 aa20.38■□□□□ 0.85
NEK3-206ENST00000611833 EVA1CP58658 441 aa20.38■□□□□ 0.85
NEK3-206ENST00000611833 KIAA2012Q0VF49 1180 aa20.38■□□□□ 0.85
NEK3-206ENST00000611833 MPNDQ8N594 471 aa20.38■□□□□ 0.85
NEK3-206ENST00000611833 ATG3Q9NT62 314 aa20.38■□□□□ 0.85
NEK3-206ENST00000611833 CIAO1O76071 339 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 HMGB1P09429 215 aaKnown RBP20.37■□□□□ 0.85
NEK3-206ENST00000611833 TERF1P54274 439 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 STOX1Q6ZVD7 989 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 BRF1Q92994 677 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 LRRC2Q9BYS8 371 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 NUP62CLQ9H1M0 184 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 H3BQV1 296 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 IFFO2Q5TF58 517 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 TMOD3Q9NYL9 352 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
NEK3-206ENST00000611833 STRCQ7RTU9 1775 aa20.37■□□□□ 0.85
NEK3-206ENST00000611833 ZNF335Q9H4Z2 1342 aaPredicted RBP20.36■□□□□ 0.85
NEK3-206ENST00000611833 LIG1P18858 919 aa20.36■□□□□ 0.85
NEK3-206ENST00000611833 TCIRG1Q13488 830 aa20.36■□□□□ 0.85
NEK3-206ENST00000611833 MAP3K11Q16584 847 aa20.36■□□□□ 0.85
NEK3-206ENST00000611833 IFIT1P09914 478 aaKnown RBP20.36■□□□□ 0.85
NEK3-206ENST00000611833 CAMK4Q16566 473 aa20.36■□□□□ 0.85
NEK3-206ENST00000611833 ZMYM1Q5SVZ6 1142 aa20.36■□□□□ 0.85
NEK3-206ENST00000611833 DDX11Q96FC9 970 aa20.36■□□□□ 0.85
NEK3-206ENST00000611833 LAMA4Q16363 1823 aa20.36■□□□□ 0.85
NEK3-206ENST00000611833 LEO1Q8WVC0 666 aaPredicted RBP20.35■□□□□ 0.85
NEK3-206ENST00000611833 DSCC1Q9BVC3 393 aa20.35■□□□□ 0.85
NEK3-206ENST00000611833 HSP90AA2PQ14568 343 aaPredicted RBP20.35■□□□□ 0.85
NEK3-206ENST00000611833 DHX32Q7L7V1 743 aaKnown RBP20.35■□□□□ 0.85
NEK3-206ENST00000611833 ZNF830Q96NB3 372 aaPredicted RBP20.35■□□□□ 0.85
NEK3-206ENST00000611833 SCRN1Q12765 414 aa20.34■□□□□ 0.85
NEK3-206ENST00000611833 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
NEK3-206ENST00000611833 CCDC57Q2TAC2 916 aa20.33■□□□□ 0.85
NEK3-206ENST00000611833 DNAJC10Q8IXB1 793 aa20.33■□□□□ 0.85
NEK3-206ENST00000611833 TNMDQ9H2S6 317 aa20.33■□□□□ 0.85
NEK3-206ENST00000611833 DACT1Q9NYF0 836 aa20.33■□□□□ 0.85
NEK3-206ENST00000611833 A0A0G2JLW4 131 aa20.33■□□□□ 0.84
NEK3-206ENST00000611833 TICAM2Q86XR7 235 aa20.33■□□□□ 0.84
NEK3-206ENST00000611833 CEP126Q9P2H0 1117 aa20.33■□□□□ 0.84
NEK3-206ENST00000611833 MAST3O60307 1309 aa20.33■□□□□ 0.84
NEK3-206ENST00000611833 SPEF2Q9C093 1822 aa20.32■□□□□ 0.84
NEK3-206ENST00000611833 RRP9O43818 475 aaKnown RBP20.32■□□□□ 0.84
NEK3-206ENST00000611833 HSPD1P10809 573 aaKnown RBP20.32■□□□□ 0.84
NEK3-206ENST00000611833 PIGBQ92521 554 aa20.32■□□□□ 0.84
NEK3-206ENST00000611833 LLPHQ9BRT6 129 aaKnown RBP20.32■□□□□ 0.84
NEK3-206ENST00000611833 ZSCAN16Q9H4T2 348 aaPredicted RBP20.32■□□□□ 0.84
NEK3-206ENST00000611833 RNF113AO15541 343 aaKnown RBP20.32■□□□□ 0.84
NEK3-206ENST00000611833 PFKFB2O60825 505 aa20.32■□□□□ 0.84
NEK3-206ENST00000611833 RESTQ13127 1097 aa20.32■□□□□ 0.84
NEK3-206ENST00000611833 TRIM28Q13263 835 aaKnown RBP20.32■□□□□ 0.84
NEK3-206ENST00000611833 BICD2Q8TD16 824 aa20.32■□□□□ 0.84
NEK3-206ENST00000611833 FAM89AQ96GI7 184 aa20.32■□□□□ 0.84
NEK3-206ENST00000611833 CCDC85AQ96PX6 553 aaPredicted RBP20.32■□□□□ 0.84
NEK3-206ENST00000611833 DDX19AQ9NUU7 478 aaKnown RBP20.32■□□□□ 0.84
NEK3-206ENST00000611833 TTC12Q9H892 705 aaPredicted RBP20.31■□□□□ 0.84
NEK3-206ENST00000611833 TYRO3Q06418 890 aa20.31■□□□□ 0.84
NEK3-206ENST00000611833 APOBRQ0VD83 1088 aa20.31■□□□□ 0.84
NEK3-206ENST00000611833 GORABQ5T7V8 394 aa20.31■□□□□ 0.84
NEK3-206ENST00000611833 CKAP2LQ8IYA6 745 aa20.31■□□□□ 0.84
NEK3-206ENST00000611833 FAM200AQ8TCP9 573 aa20.31■□□□□ 0.84
NEK3-206ENST00000611833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.31■□□□□ 0.84
NEK3-206ENST00000611833 NAP1L2Q9ULW6 460 aaPredicted RBP20.31■□□□□ 0.84
NEK3-206ENST00000611833 ADORA1P30542 326 aa20.3■□□□□ 0.84
NEK3-206ENST00000611833 FKBP4Q02790 459 aaKnown RBP eCLIP20.3■□□□□ 0.84
NEK3-206ENST00000611833 SMARCC2Q8TAQ2 1214 aa20.3■□□□□ 0.84
NEK3-206ENST00000611833 CFAP45Q9UL16 551 aa20.3■□□□□ 0.84
NEK3-206ENST00000611833 E7EWF7 191 aa20.3■□□□□ 0.84
NEK3-206ENST00000611833 M0R2C6 588 aa20.3■□□□□ 0.84
NEK3-206ENST00000611833 PCCAP05165 728 aaPredicted RBP20.3■□□□□ 0.84
NEK3-206ENST00000611833 CCDC158Q5M9N0 1113 aa20.3■□□□□ 0.84
NEK3-206ENST00000611833 KIF6Q6ZMV9 814 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms