RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
COPS7B-223ENST00000611614 SYNE4Q8N205 404 aa16.65■□□□□ 0.26
COPS7B-223ENST00000611614 RUFY2Q8WXA3 655 aa16.65■□□□□ 0.26
COPS7B-223ENST00000611614 CSF1RP07333 972 aa16.64■□□□□ 0.26
COPS7B-223ENST00000611614 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.26
COPS7B-223ENST00000611614 ZSCAN30Q86W11 494 aa16.64■□□□□ 0.26
COPS7B-223ENST00000611614 CCDC85AQ96PX6 553 aaPredicted RBP16.64■□□□□ 0.26
COPS7B-223ENST00000611614 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.26
COPS7B-223ENST00000611614 SNX14Q9Y5W7 946 aa16.64■□□□□ 0.26
COPS7B-223ENST00000611614 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.26
COPS7B-223ENST00000611614 PHF14O94880 888 aa16.64■□□□□ 0.25
COPS7B-223ENST00000611614 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
COPS7B-223ENST00000611614 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
COPS7B-223ENST00000611614 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
COPS7B-223ENST00000611614 LRRC4BQ9NT99 713 aa16.64■□□□□ 0.25
COPS7B-223ENST00000611614 LY75O60449 1722 aa16.64■□□□□ 0.25
COPS7B-223ENST00000611614 EYA2O00167 538 aa16.63■□□□□ 0.25
COPS7B-223ENST00000611614 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
COPS7B-223ENST00000611614 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
COPS7B-223ENST00000611614 BRD1O95696 1058 aa16.63■□□□□ 0.25
COPS7B-223ENST00000611614 ADRA2BP18089 450 aa16.63■□□□□ 0.25
COPS7B-223ENST00000611614 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
COPS7B-223ENST00000611614 TTLL11Q8NHH1 800 aa16.63■□□□□ 0.25
COPS7B-223ENST00000611614 ARHGEF1Q92888 912 aaKnown RBP16.63■□□□□ 0.25
COPS7B-223ENST00000611614 EVI5LQ96CN4 794 aa16.63■□□□□ 0.25
COPS7B-223ENST00000611614 SETDB2Q96T68 719 aa16.63■□□□□ 0.25
COPS7B-223ENST00000611614 APBA3O96018 575 aa16.62■□□□□ 0.25
COPS7B-223ENST00000611614 TFCP2Q12800 502 aa16.62■□□□□ 0.25
COPS7B-223ENST00000611614 CIAO1O76071 339 aa16.62■□□□□ 0.25
COPS7B-223ENST00000611614 EAF2Q96CJ1 260 aaPredicted RBP16.62■□□□□ 0.25
COPS7B-223ENST00000611614 ZNF594Q96JF6 807 aaPredicted RBP16.62■□□□□ 0.25
COPS7B-223ENST00000611614 PRPF40AO75400 957 aaKnown RBP16.61■□□□□ 0.25
COPS7B-223ENST00000611614 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
COPS7B-223ENST00000611614 ITGA6P23229 1130 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 TERF1P54274 439 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 TXNRD1Q16881 649 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 CCDC8Q9H0W5 538 aaPredicted RBP16.61■□□□□ 0.25
COPS7B-223ENST00000611614 NTSR2O95665 410 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 TNNI3KQ59H18 835 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 TTC14Q96N46 770 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 CEP126Q9P2H0 1117 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 SRP68Q9UHB9 627 aaKnown RBP16.61■□□□□ 0.25
COPS7B-223ENST00000611614 FPGT-TNNI3KV9GXZ4 949 aa16.61■□□□□ 0.25
COPS7B-223ENST00000611614 PLSCR1O15162 318 aa16.6■□□□□ 0.25
COPS7B-223ENST00000611614 NPHP1O15259 732 aa16.6■□□□□ 0.25
COPS7B-223ENST00000611614 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
COPS7B-223ENST00000611614 POTEAQ6S8J7 498 aa16.6■□□□□ 0.25
COPS7B-223ENST00000611614 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
COPS7B-223ENST00000611614 GREM2Q9H772 168 aa16.6■□□□□ 0.25
COPS7B-223ENST00000611614 RGS17Q9UGC6 210 aaPredicted RBP16.6■□□□□ 0.25
COPS7B-223ENST00000611614 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
COPS7B-223ENST00000611614 TBC1D9BQ66K14 1250 aa16.6■□□□□ 0.25
COPS7B-223ENST00000611614 LDHAL6AQ6ZMR3 332 aa16.6■□□□□ 0.25
COPS7B-223ENST00000611614 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
COPS7B-223ENST00000611614 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.59■□□□□ 0.25
COPS7B-223ENST00000611614 HIP1O00291 1037 aa16.59■□□□□ 0.25
COPS7B-223ENST00000611614 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
COPS7B-223ENST00000611614 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-223ENST00000611614 ATG9AQ7Z3C6 839 aa16.59■□□□□ 0.25
COPS7B-223ENST00000611614 CNNM1Q9NRU3 951 aa16.59■□□□□ 0.25
COPS7B-223ENST00000611614 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-223ENST00000611614 LRRC24Q50LG9 513 aa16.59■□□□□ 0.25
COPS7B-223ENST00000611614 FOXD4L5Q5VV16 416 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-223ENST00000611614 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-223ENST00000611614 FOXD4L4Q8WXT5 416 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-223ENST00000611614 MSNP26038 577 aaKnown RBP16.58■□□□□ 0.25
COPS7B-223ENST00000611614 TPTE2Q6XPS3 522 aa16.58■□□□□ 0.25
COPS7B-223ENST00000611614 KCNB2Q92953 911 aa16.58■□□□□ 0.25
COPS7B-223ENST00000611614 NEUROD6Q96NK8 337 aa16.58■□□□□ 0.25
COPS7B-223ENST00000611614 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.25
COPS7B-223ENST00000611614 GPR108Q9NPR9 543 aa16.58■□□□□ 0.25
COPS7B-223ENST00000611614 AKAP2Q9Y2D5 859 aa16.58■□□□□ 0.25
COPS7B-223ENST00000611614 OFD1O75665 1012 aa16.58■□□□□ 0.24
COPS7B-223ENST00000611614 PTH1RQ03431 593 aa16.58■□□□□ 0.24
COPS7B-223ENST00000611614 ZSCAN23Q3MJ62 389 aa16.58■□□□□ 0.24
COPS7B-223ENST00000611614 GPT2Q8TD30 523 aa16.58■□□□□ 0.24
COPS7B-223ENST00000611614 TAF1LQ8IZX4 1826 aa16.58■□□□□ 0.24
COPS7B-223ENST00000611614 AK2P54819 239 aa16.57■□□□□ 0.24
COPS7B-223ENST00000611614 TULP1O00294 542 aaPredicted RBP16.57■□□□□ 0.24
COPS7B-223ENST00000611614 PUS3Q9BZE2 481 aaKnown RBP16.57■□□□□ 0.24
COPS7B-223ENST00000611614 TLR7Q9NYK1 1049 aaKnown RBP16.57■□□□□ 0.24
COPS7B-223ENST00000611614 LIMCH1Q9UPQ0 1083 aa16.57■□□□□ 0.24
COPS7B-223ENST00000611614 BCORQ6W2J9 1755 aa16.57■□□□□ 0.24
COPS7B-223ENST00000611614 ERFEQ4G0M1 354 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 CHAMP1Q96JM3 812 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 MPHOSPH8Q99549 860 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 TM6SF1Q9BZW5 370 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 METTL24Q5JXM2 366 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 RUFY3Q7L099 469 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 PDLIM2Q96JY6 352 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 CCDC171Q6TFL3 1326 aa16.56■□□□□ 0.24
COPS7B-223ENST00000611614 WDR33Q9C0J8 1336 aaKnown RBP16.56■□□□□ 0.24
COPS7B-223ENST00000611614 CASTP20810 708 aaKnown RBP16.55■□□□□ 0.24
COPS7B-223ENST00000611614 NMIQ13287 307 aaPredicted RBP16.55■□□□□ 0.24
COPS7B-223ENST00000611614 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
COPS7B-223ENST00000611614 EP400Q96L91 3159 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms