RNA–Protein interactions for RNA: ENST00000610974.1

RN7SL539P-201, Transcript of RNA, 7SL, cytoplasmic 539, pseudogene, humanhuman

BASIC

Gene RN7SL539P, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL539P-201ENST00000610974 RBM26Q5T8P6 1007 aaKnown RBP13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 RGMBQ6NW40 437 aa13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 C2orf69Q8N8R5 385 aa13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 TBC1D16Q8TBP0 767 aa13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 CCDC102AQ96A19 550 aa13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 KCNQ5Q9NR82 932 aa13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 ADM5C9JUS6 153 aa13.19□□□□□ -0.3
RN7SL539P-201ENST00000610974 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
RN7SL539P-201ENST00000610974 ZEB1P37275 1124 aaPredicted RBP13.19□□□□□ -0.3
RN7SL539P-201ENST00000610974 RUNDC1Q96C34 613 aa13.19□□□□□ -0.3
RN7SL539P-201ENST00000610974 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
RN7SL539P-201ENST00000610974 SAGE1Q9NXZ1 904 aa13.19□□□□□ -0.3
RN7SL539P-201ENST00000610974 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
RN7SL539P-201ENST00000610974 VIL1P09327 827 aaKnown RBP13.18□□□□□ -0.3
RN7SL539P-201ENST00000610974 KIF4BQ2VIQ3 1234 aa13.18□□□□□ -0.3
RN7SL539P-201ENST00000610974 DUSP27Q5VZP5 1158 aa13.18□□□□□ -0.3
RN7SL539P-201ENST00000610974 ZC3H12CQ9C0D7 883 aaKnown RBP13.18□□□□□ -0.3
RN7SL539P-201ENST00000610974 PODXL2Q9NZ53 605 aa13.18□□□□□ -0.3
RN7SL539P-201ENST00000610974 MYBBP1AQ9BQG0 1328 aaKnown RBP13.17□□□□□ -0.3
RN7SL539P-201ENST00000610974 ZNF157P51786 506 aaPredicted RBP13.17□□□□□ -0.3
RN7SL539P-201ENST00000610974 KIF23Q02241 960 aaPredicted RBP13.17□□□□□ -0.3
RN7SL539P-201ENST00000610974 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
RN7SL539P-201ENST00000610974 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
RN7SL539P-201ENST00000610974 GGA3Q9NZ52 723 aa13.17□□□□□ -0.3
RN7SL539P-201ENST00000610974 ZNF609O15014 1411 aa13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 AKAP11Q9UKA4 1901 aa13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 G3V3G9 751 aa13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 HSP90B1P14625 803 aaKnown RBP13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 RIC3Q7Z5B4 369 aa13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 RNF186Q9NXI6 227 aa13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 ANKIB1Q9P2G1 1089 aa13.16□□□□□ -0.3
RN7SL539P-201ENST00000610974 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
RN7SL539P-201ENST00000610974 TRPA1O75762 1119 aa13.15□□□□□ -0.3
RN7SL539P-201ENST00000610974 UFL1O94874 794 aa13.15□□□□□ -0.3
RN7SL539P-201ENST00000610974 SLC10A3P09131 477 aa13.15□□□□□ -0.3
RN7SL539P-201ENST00000610974 ZNF280AP59817 542 aaPredicted RBP13.15□□□□□ -0.3
RN7SL539P-201ENST00000610974 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
RN7SL539P-201ENST00000610974 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
RN7SL539P-201ENST00000610974 GGA1Q9UJY5 639 aa13.15□□□□□ -0.3
RN7SL539P-201ENST00000610974 PSME4Q14997 1843 aa13.15□□□□□ -0.3
RN7SL539P-201ENST00000610974 ANGEL2Q5VTE6 544 aaKnown RBP13.14□□□□□ -0.31
RN7SL539P-201ENST00000610974 RSBN1LQ6PCB5 846 aaPredicted RBP13.14□□□□□ -0.31
RN7SL539P-201ENST00000610974 AGBL3Q8NEM8 1001 aa13.14□□□□□ -0.31
RN7SL539P-201ENST00000610974 CDCA5Q96FF9 252 aa13.14□□□□□ -0.31
RN7SL539P-201ENST00000610974 CSRNP1Q96S65 589 aa13.14□□□□□ -0.31
RN7SL539P-201ENST00000610974 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
RN7SL539P-201ENST00000610974 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
RN7SL539P-201ENST00000610974 PDE8AO60658 829 aa13.13□□□□□ -0.31
RN7SL539P-201ENST00000610974 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
RN7SL539P-201ENST00000610974 ZNF853P0CG23 659 aa13.13□□□□□ -0.31
RN7SL539P-201ENST00000610974 SCARF1Q14162 830 aa13.13□□□□□ -0.31
RN7SL539P-201ENST00000610974 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
RN7SL539P-201ENST00000610974 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
RN7SL539P-201ENST00000610974 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
RN7SL539P-201ENST00000610974 MYD88Q99836 296 aa13.13□□□□□ -0.31
RN7SL539P-201ENST00000610974 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
RN7SL539P-201ENST00000610974 FKBP1BP68106 108 aa13.12□□□□□ -0.31
RN7SL539P-201ENST00000610974 GMLQ99445 158 aa13.12□□□□□ -0.31
RN7SL539P-201ENST00000610974 CWC25Q9NXE8 425 aaPredicted RBP13.12□□□□□ -0.31
RN7SL539P-201ENST00000610974 PAPPA2Q9BXP8 1791 aa13.12□□□□□ -0.31
RN7SL539P-201ENST00000610974 XDHP47989 1333 aa13.12□□□□□ -0.31
RN7SL539P-201ENST00000610974 PITPNM2Q9BZ72 1349 aa13.12□□□□□ -0.31
RN7SL539P-201ENST00000610974 USP17L3A6NCW0 530 aa13.11□□□□□ -0.31
RN7SL539P-201ENST00000610974 USP17L4A6NCW7 530 aa13.11□□□□□ -0.31
RN7SL539P-201ENST00000610974 USP17L1Q7RTZ2 530 aa13.11□□□□□ -0.31
RN7SL539P-201ENST00000610974 PODNQ7Z5L7 613 aa13.11□□□□□ -0.31
RN7SL539P-201ENST00000610974 RASAL3Q86YV0 1011 aa13.11□□□□□ -0.31
RN7SL539P-201ENST00000610974 ANKRD18AQ8IVF6 992 aa13.11□□□□□ -0.31
RN7SL539P-201ENST00000610974 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
RN7SL539P-201ENST00000610974 MYOZ2Q9NPC6 264 aa13.11□□□□□ -0.31
RN7SL539P-201ENST00000610974 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
RN7SL539P-201ENST00000610974 ELL2O00472 640 aaPredicted RBP13.1□□□□□ -0.31
RN7SL539P-201ENST00000610974 ATP2B4P23634 1241 aa13.1□□□□□ -0.31
RN7SL539P-201ENST00000610974 GNAI1P63096 354 aa13.1□□□□□ -0.31
RN7SL539P-201ENST00000610974 DDX10Q13206 875 aaKnown RBP13.1□□□□□ -0.31
RN7SL539P-201ENST00000610974 CTU1Q7Z7A3 348 aaKnown RBP13.1□□□□□ -0.31
RN7SL539P-201ENST00000610974 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
RN7SL539P-201ENST00000610974 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
RN7SL539P-201ENST00000610974 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
RN7SL539P-201ENST00000610974 SOX10P56693 466 aa13.09□□□□□ -0.31
RN7SL539P-201ENST00000610974 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
RN7SL539P-201ENST00000610974 CTSWP56202 376 aa13.08□□□□□ -0.32
RN7SL539P-201ENST00000610974 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
RN7SL539P-201ENST00000610974 CDC5LQ99459 802 aaKnown RBP13.08□□□□□ -0.32
RN7SL539P-201ENST00000610974 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
RN7SL539P-201ENST00000610974 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 ZNF646O15015 1829 aaPredicted RBP13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 WTIPA6NIX2 430 aaPredicted RBP13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 APAF1O14727 1248 aa13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 MOB2Q70IA6 237 aa13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 BSDC1Q9NW68 430 aaPredicted RBP13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 MINPP1Q9UNW1 487 aa13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 SCAF8Q9UPN6 1271 aaKnown RBP13.07□□□□□ -0.32
RN7SL539P-201ENST00000610974 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms