RNA–Protein interactions for RNA: ENST00000610234.5

LINC01278-207, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 555 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-207ENST00000610234 BRCA2P51587 3418 aa18.66■□□□□ 0.58
LINC01278-207ENST00000610234 RBM26Q5T8P6 1007 aaKnown RBP18.66■□□□□ 0.58
LINC01278-207ENST00000610234 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
LINC01278-207ENST00000610234 RIMBP2O15034 1052 aa18.65■□□□□ 0.58
LINC01278-207ENST00000610234 ZNF280AP59817 542 aaPredicted RBP18.65■□□□□ 0.58
LINC01278-207ENST00000610234 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
LINC01278-207ENST00000610234 SULF1Q8IWU6 871 aa18.65■□□□□ 0.58
LINC01278-207ENST00000610234 TBC1D16Q8TBP0 767 aa18.65■□□□□ 0.58
LINC01278-207ENST00000610234 PAPPA2Q9BXP8 1791 aa18.64■□□□□ 0.57
LINC01278-207ENST00000610234 DOK7Q18PE1 504 aa18.64■□□□□ 0.57
LINC01278-207ENST00000610234 ISCA1Q9BUE6 129 aa18.64■□□□□ 0.57
LINC01278-207ENST00000610234 C6orf229H3BNL8 230 aa18.63■□□□□ 0.57
LINC01278-207ENST00000610234 FKBP1BP68106 108 aa18.63■□□□□ 0.57
LINC01278-207ENST00000610234 PKN2Q16513 984 aaKnown RBP18.63■□□□□ 0.57
LINC01278-207ENST00000610234 EYA3Q99504 573 aa18.63■□□□□ 0.57
LINC01278-207ENST00000610234 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
LINC01278-207ENST00000610234 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
LINC01278-207ENST00000610234 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
LINC01278-207ENST00000610234 FAM89AQ96GI7 184 aa18.62■□□□□ 0.57
LINC01278-207ENST00000610234 PSME4Q14997 1843 aa18.62■□□□□ 0.57
LINC01278-207ENST00000610234 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
LINC01278-207ENST00000610234 ANGEL2Q5VTE6 544 aaKnown RBP18.61■□□□□ 0.57
LINC01278-207ENST00000610234 PLBD2Q8NHP8 589 aa18.61■□□□□ 0.57
LINC01278-207ENST00000610234 ZNF296Q8WUU4 475 aaPredicted RBP18.61■□□□□ 0.57
LINC01278-207ENST00000610234 GMLQ99445 158 aa18.61■□□□□ 0.57
LINC01278-207ENST00000610234 PITPNM2Q9BZ72 1349 aa18.6■□□□□ 0.57
LINC01278-207ENST00000610234 SCARF1Q14162 830 aa18.6■□□□□ 0.57
LINC01278-207ENST00000610234 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
LINC01278-207ENST00000610234 NOM1Q5C9Z4 860 aaKnown RBP18.6■□□□□ 0.57
LINC01278-207ENST00000610234 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
LINC01278-207ENST00000610234 TRIM28Q13263 835 aaKnown RBP18.59■□□□□ 0.57
LINC01278-207ENST00000610234 RSBN1LQ6PCB5 846 aaPredicted RBP18.59■□□□□ 0.57
LINC01278-207ENST00000610234 AGBL3Q8NEM8 1001 aa18.59■□□□□ 0.57
LINC01278-207ENST00000610234 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
LINC01278-207ENST00000610234 CHPF2Q9P2E5 772 aa18.59■□□□□ 0.57
LINC01278-207ENST00000610234 RIPK4P57078 832 aa18.58■□□□□ 0.56
LINC01278-207ENST00000610234 MOB2Q70IA6 237 aa18.58■□□□□ 0.56
LINC01278-207ENST00000610234 ZC3H12CQ9C0D7 883 aaKnown RBP18.58■□□□□ 0.56
LINC01278-207ENST00000610234 ATP5J2-PTCD1G3V325 749 aa18.57■□□□□ 0.56
LINC01278-207ENST00000610234 CHL1O00533 1208 aa18.57■□□□□ 0.56
LINC01278-207ENST00000610234 TBC1D8O95759 1140 aa18.57■□□□□ 0.56
LINC01278-207ENST00000610234 TM4SF4P48230 202 aa18.57■□□□□ 0.56
LINC01278-207ENST00000610234 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
LINC01278-207ENST00000610234 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
LINC01278-207ENST00000610234 CFHR5Q9BXR6 569 aa18.56■□□□□ 0.56
LINC01278-207ENST00000610234 GPR25O00155 361 aa18.55■□□□□ 0.56
LINC01278-207ENST00000610234 UFL1O94874 794 aa18.55■□□□□ 0.56
LINC01278-207ENST00000610234 TMPOP42166 694 aaKnown RBP18.55■□□□□ 0.56
LINC01278-207ENST00000610234 FBXO46Q6PJ61 603 aaPredicted RBP18.55■□□□□ 0.56
LINC01278-207ENST00000610234 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
LINC01278-207ENST00000610234 SEC31BQ9NQW1 1179 aa18.55■□□□□ 0.56
LINC01278-207ENST00000610234 ZNF646O15015 1829 aaPredicted RBP18.54■□□□□ 0.56
LINC01278-207ENST00000610234 UBE2Q2LH0YL09 131 aa18.54■□□□□ 0.56
LINC01278-207ENST00000610234 USP17L8P0C7I0 530 aa18.54■□□□□ 0.56
LINC01278-207ENST00000610234 RTL5Q5HYW3 569 aaPredicted RBP18.54■□□□□ 0.56
LINC01278-207ENST00000610234 GGA1Q9UJY5 639 aa18.54■□□□□ 0.56
LINC01278-207ENST00000610234 HDAC9Q9UKV0 1011 aa18.54■□□□□ 0.56
LINC01278-207ENST00000610234 HOXB7P09629 217 aa18.53■□□□□ 0.56
LINC01278-207ENST00000610234 LMOD3Q0VAK6 560 aa18.53■□□□□ 0.56
LINC01278-207ENST00000610234 SCAF8Q9UPN6 1271 aaKnown RBP18.53■□□□□ 0.56
LINC01278-207ENST00000610234 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.56
LINC01278-207ENST00000610234 ZBTB38Q8NAP3 1195 aaPredicted RBP18.52■□□□□ 0.56
LINC01278-207ENST00000610234 R3HDMLQ9H3Y0 253 aa18.52■□□□□ 0.56
LINC01278-207ENST00000610234 ANKIB1Q9P2G1 1089 aa18.52■□□□□ 0.56
LINC01278-207ENST00000610234 DBF4Q9UBU7 674 aaPredicted RBP18.52■□□□□ 0.56
LINC01278-207ENST00000610234 SZT2Q5T011 3432 aa18.51■□□□□ 0.55
LINC01278-207ENST00000610234 PRAMEF18Q5VWM3 479 aa18.51■□□□□ 0.55
LINC01278-207ENST00000610234 USP17L3A6NCW0 530 aa18.5■□□□□ 0.55
LINC01278-207ENST00000610234 USP17L4A6NCW7 530 aa18.5■□□□□ 0.55
LINC01278-207ENST00000610234 NBPF9Q3BBW0 867 aa18.5■□□□□ 0.55
LINC01278-207ENST00000610234 USP17L1Q7RTZ2 530 aa18.5■□□□□ 0.55
LINC01278-207ENST00000610234 PODNQ7Z5L7 613 aa18.5■□□□□ 0.55
LINC01278-207ENST00000610234 GCC1Q96CN9 775 aa18.5■□□□□ 0.55
LINC01278-207ENST00000610234 KIAA0100Q14667 2235 aaKnown RBP18.5■□□□□ 0.55
LINC01278-207ENST00000610234 G3V3G9 751 aa18.49■□□□□ 0.55
LINC01278-207ENST00000610234 DCAF8Q5TAQ9 597 aa18.49■□□□□ 0.55
LINC01278-207ENST00000610234 HYPKQ9NX55 129 aa18.49■□□□□ 0.55
LINC01278-207ENST00000610234 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
LINC01278-207ENST00000610234 CEP290O15078 2479 aa18.49■□□□□ 0.55
LINC01278-207ENST00000610234 RANBP2P49792 3224 aaKnown RBP18.49■□□□□ 0.55
LINC01278-207ENST00000610234 XDHP47989 1333 aa18.49■□□□□ 0.55
LINC01278-207ENST00000610234 WTIPA6NIX2 430 aaPredicted RBP18.48■□□□□ 0.55
LINC01278-207ENST00000610234 FKTNO75072 461 aa18.48■□□□□ 0.55
LINC01278-207ENST00000610234 HABP4Q5JVS0 413 aaKnown RBP18.48■□□□□ 0.55
LINC01278-207ENST00000610234 WNT10BO00744 389 aa18.47■□□□□ 0.55
LINC01278-207ENST00000610234 SREBF2Q12772 1141 aa18.47■□□□□ 0.55
LINC01278-207ENST00000610234 DACT2Q5SW24 774 aa18.47■□□□□ 0.55
LINC01278-207ENST00000610234 LDLRAD1Q5T700 205 aa18.47■□□□□ 0.55
LINC01278-207ENST00000610234 PCCAP05165 728 aaPredicted RBP18.46■□□□□ 0.55
LINC01278-207ENST00000610234 PTPN12Q05209 780 aaKnown RBP18.46■□□□□ 0.55
LINC01278-207ENST00000610234 CCDC152Q4G0S7 254 aa18.46■□□□□ 0.55
LINC01278-207ENST00000610234 LAMB1P07942 1786 aa18.45■□□□□ 0.54
LINC01278-207ENST00000610234 MED23Q9ULK4 1368 aa18.45■□□□□ 0.54
LINC01278-207ENST00000610234 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
LINC01278-207ENST00000610234 ATP2B4P23634 1241 aa18.45■□□□□ 0.54
LINC01278-207ENST00000610234 MKRN3Q13064 507 aaKnown RBP18.45■□□□□ 0.54
LINC01278-207ENST00000610234 SPRYD7Q5W111 196 aa18.45■□□□□ 0.54
LINC01278-207ENST00000610234 MXD3Q9BW11 206 aa18.45■□□□□ 0.54
LINC01278-207ENST00000610234 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
LINC01278-207ENST00000610234 PDE8AO60658 829 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms