RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 SAPCD2Q86UD0 394 aa17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 ZC3H12CQ9C0D7 883 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 ZNF408Q9H9D4 720 aa17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 CWC25Q9NXE8 425 aaPredicted RBP17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 AOC2O75106 756 aa17.26■□□□□ 0.35
POLR2J3-219ENST00000608621 CCDC152Q4G0S7 254 aa17.26■□□□□ 0.35
POLR2J3-219ENST00000608621 USP48Q86UV5 1035 aa17.26■□□□□ 0.35
POLR2J3-219ENST00000608621 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
POLR2J3-219ENST00000608621 PODXL2Q9NZ53 605 aa17.26■□□□□ 0.35
POLR2J3-219ENST00000608621 TBC1D10BQ4KMP7 808 aaPredicted RBP17.25■□□□□ 0.35
POLR2J3-219ENST00000608621 RBM26Q5T8P6 1007 aaKnown RBP17.25■□□□□ 0.35
POLR2J3-219ENST00000608621 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
POLR2J3-219ENST00000608621 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
POLR2J3-219ENST00000608621 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
POLR2J3-219ENST00000608621 MAP3K2Q9Y2U5 619 aa17.25■□□□□ 0.35
POLR2J3-219ENST00000608621 G3V3G9 751 aa17.24■□□□□ 0.35
POLR2J3-219ENST00000608621 RPS12P25398 132 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-219ENST00000608621 MAP2K2P36507 400 aa17.24■□□□□ 0.35
POLR2J3-219ENST00000608621 DCAF8Q5TAQ9 597 aa17.24■□□□□ 0.35
POLR2J3-219ENST00000608621 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
POLR2J3-219ENST00000608621 TSR2Q969E8 191 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-219ENST00000608621 RTL9Q8NET4 1388 aa17.24■□□□□ 0.35
POLR2J3-219ENST00000608621 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
POLR2J3-219ENST00000608621 UFL1O94874 794 aa17.23■□□□□ 0.35
POLR2J3-219ENST00000608621 EGFRP00533 1210 aa17.23■□□□□ 0.35
POLR2J3-219ENST00000608621 VIL1P09327 827 aaKnown RBP17.23■□□□□ 0.35
POLR2J3-219ENST00000608621 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
POLR2J3-219ENST00000608621 HHIPL1Q96JK4 782 aa17.23■□□□□ 0.35
POLR2J3-219ENST00000608621 GGA1Q9UJY5 639 aa17.23■□□□□ 0.35
POLR2J3-219ENST00000608621 IGKV5-2P06315 115 aa17.22■□□□□ 0.35
POLR2J3-219ENST00000608621 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
POLR2J3-219ENST00000608621 POLR2AP24928 1970 aaKnown RBP17.22■□□□□ 0.35
POLR2J3-219ENST00000608621 CCDC27Q2M243 656 aa17.21■□□□□ 0.35
POLR2J3-219ENST00000608621 KRT26Q7Z3Y9 468 aa17.21■□□□□ 0.35
POLR2J3-219ENST00000608621 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
POLR2J3-219ENST00000608621 DCPSQ96C86 337 aaKnown RBP17.21■□□□□ 0.35
POLR2J3-219ENST00000608621 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
POLR2J3-219ENST00000608621 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
POLR2J3-219ENST00000608621 G2E3Q7L622 706 aa17.2■□□□□ 0.34
POLR2J3-219ENST00000608621 TTLL11Q8NHH1 800 aa17.2■□□□□ 0.34
POLR2J3-219ENST00000608621 TSKSQ9UJT2 592 aa17.2■□□□□ 0.34
POLR2J3-219ENST00000608621 SCN9AQ15858 1988 aa17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 THSD7BQ9C0I4 1608 aa17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 ATP2B4P23634 1241 aa17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 CTSWP56202 376 aa17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 HUNKP57058 714 aa17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 KIF4BQ2VIQ3 1234 aa17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 XDHP47989 1333 aa17.19■□□□□ 0.34
POLR2J3-219ENST00000608621 WTIPA6NIX2 430 aaPredicted RBP17.18■□□□□ 0.34
POLR2J3-219ENST00000608621 ADM5C9JUS6 153 aa17.18■□□□□ 0.34
POLR2J3-219ENST00000608621 RSBN1LQ6PCB5 846 aaPredicted RBP17.18■□□□□ 0.34
POLR2J3-219ENST00000608621 CDC5LQ99459 802 aaKnown RBP17.18■□□□□ 0.34
POLR2J3-219ENST00000608621 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 C2orf69Q8N8R5 385 aa17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 AGBL3Q8NEM8 1001 aa17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 ABHD8Q96I13 439 aa17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 ZIC5Q96T25 663 aa17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 GREM2Q9H772 168 aa17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 GBA2Q9HCG7 927 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 ASTN2O75129 1339 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-219ENST00000608621 H7C1W4 665 aa17.16■□□□□ 0.34
POLR2J3-219ENST00000608621 BRPF1P55201 1214 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-219ENST00000608621 NOGQ13253 232 aa17.16■□□□□ 0.34
POLR2J3-219ENST00000608621 PODNQ7Z5L7 613 aa17.16■□□□□ 0.34
POLR2J3-219ENST00000608621 IL16Q14005 1332 aa17.16■□□□□ 0.34
POLR2J3-219ENST00000608621 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 CA12O43570 354 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 SCARF1Q14162 830 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 RGMBQ6NW40 437 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 SULF1Q8IWU6 871 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 GMLQ99445 158 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
POLR2J3-219ENST00000608621 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-219ENST00000608621 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
POLR2J3-219ENST00000608621 USP17L8P0C7I0 530 aa17.13■□□□□ 0.33
POLR2J3-219ENST00000608621 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-219ENST00000608621 FLIIQ13045 1269 aa17.13■□□□□ 0.33
POLR2J3-219ENST00000608621 GCKRQ14397 625 aa17.13■□□□□ 0.33
POLR2J3-219ENST00000608621 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-219ENST00000608621 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
POLR2J3-219ENST00000608621 MYOZ2Q9NPC6 264 aa17.13■□□□□ 0.33
POLR2J3-219ENST00000608621 FAM155AB1AL88 458 aaPredicted RBP17.12■□□□□ 0.33
POLR2J3-219ENST00000608621 ZNF157P51786 506 aaPredicted RBP17.12■□□□□ 0.33
POLR2J3-219ENST00000608621 CCDC102AQ96A19 550 aa17.12■□□□□ 0.33
POLR2J3-219ENST00000608621 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
POLR2J3-219ENST00000608621 VAMP4O75379 141 aa17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms