RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 CXCL9Q07325 125 aa18.34■□□□□ 0.53
HDDC2-204ENST00000608295 GGA1Q9UJY5 639 aa18.34■□□□□ 0.53
HDDC2-204ENST00000608295 ECE2O60344 883 aa18.33■□□□□ 0.52
HDDC2-204ENST00000608295 LMOD1P29536 600 aaPredicted RBP18.33■□□□□ 0.52
HDDC2-204ENST00000608295 IGHMBP2P38935 993 aaKnown RBP18.33■□□□□ 0.52
HDDC2-204ENST00000608295 EPS15P42566 896 aa18.33■□□□□ 0.52
HDDC2-204ENST00000608295 SCNN1DP51172 638 aa18.33■□□□□ 0.52
HDDC2-204ENST00000608295 FOXO4P98177 505 aa18.33■□□□□ 0.52
HDDC2-204ENST00000608295 SUCLG2Q96I99 432 aa18.33■□□□□ 0.52
HDDC2-204ENST00000608295 PLA2G12BQ9BX93 195 aa18.33■□□□□ 0.52
HDDC2-204ENST00000608295 CLEC11AQ9Y240 323 aa18.33■□□□□ 0.52
HDDC2-204ENST00000608295 RTL9Q8NET4 1388 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 PTPRCP08575 1304 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 XDHP47989 1333 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 G3V3G9 751 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 GMPSP49915 693 aaPredicted RBP18.32■□□□□ 0.52
HDDC2-204ENST00000608295 FSTL1Q12841 308 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 DCAF8Q5TAQ9 597 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 CIAPIN1Q6FI81 312 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 LMBR1LQ6UX01 489 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 ZNF594Q96JF6 807 aaPredicted RBP18.32■□□□□ 0.52
HDDC2-204ENST00000608295 EYA3Q99504 573 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 NOB1Q9ULX3 412 aaKnown RBP18.32■□□□□ 0.52
HDDC2-204ENST00000608295 ADAMTSL1Q8N6G6 1762 aa18.32■□□□□ 0.52
HDDC2-204ENST00000608295 SHTN1A0MZ66 631 aa18.31■□□□□ 0.52
HDDC2-204ENST00000608295 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
HDDC2-204ENST00000608295 NBPF7P0C2Y1 421 aaPredicted RBP18.31■□□□□ 0.52
HDDC2-204ENST00000608295 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
HDDC2-204ENST00000608295 TAF7LQ5H9L4 462 aa18.31■□□□□ 0.52
HDDC2-204ENST00000608295 CHADLQ6NUI6 762 aa18.31■□□□□ 0.52
HDDC2-204ENST00000608295 MPHOSPH8Q99549 860 aa18.31■□□□□ 0.52
HDDC2-204ENST00000608295 KCNQ5Q9NR82 932 aa18.31■□□□□ 0.52
HDDC2-204ENST00000608295 MINPP1Q9UNW1 487 aa18.31■□□□□ 0.52
HDDC2-204ENST00000608295 ZBTB12Q9Y330 459 aaPredicted RBP18.31■□□□□ 0.52
HDDC2-204ENST00000608295 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
HDDC2-204ENST00000608295 PSMD14O00487 310 aa18.29■□□□□ 0.52
HDDC2-204ENST00000608295 CSF1RP07333 972 aa18.29■□□□□ 0.52
HDDC2-204ENST00000608295 KLRK1P26718 216 aa18.29■□□□□ 0.52
HDDC2-204ENST00000608295 IFIT5Q13325 482 aaKnown RBP18.29■□□□□ 0.52
HDDC2-204ENST00000608295 MAP1SQ66K74 1059 aaPredicted RBP18.29■□□□□ 0.52
HDDC2-204ENST00000608295 HELBQ8NG08 1087 aaPredicted RBP18.29■□□□□ 0.52
HDDC2-204ENST00000608295 FBXW7Q969H0 707 aa18.29■□□□□ 0.52
HDDC2-204ENST00000608295 VPS33BQ9H267 617 aa18.29■□□□□ 0.52
HDDC2-204ENST00000608295 BSDC1Q9NW68 430 aaPredicted RBP18.29■□□□□ 0.52
HDDC2-204ENST00000608295 PODXL2Q9NZ53 605 aa18.29■□□□□ 0.52
HDDC2-204ENST00000608295 SNAP23O00161 211 aa18.28■□□□□ 0.52
HDDC2-204ENST00000608295 APLP1P51693 650 aa18.28■□□□□ 0.52
HDDC2-204ENST00000608295 RARSP54136 660 aaKnown RBP18.28■□□□□ 0.52
HDDC2-204ENST00000608295 LDHDQ86WU2 507 aa18.28■□□□□ 0.52
HDDC2-204ENST00000608295 BICC1Q9H694 974 aaKnown RBP18.28■□□□□ 0.52
HDDC2-204ENST00000608295 PSME4Q14997 1843 aa18.28■□□□□ 0.52
HDDC2-204ENST00000608295 PLIN1O60240 522 aa18.27■□□□□ 0.52
HDDC2-204ENST00000608295 TAF5LO75529 589 aa18.27■□□□□ 0.52
HDDC2-204ENST00000608295 ATP2B4P23634 1241 aa18.27■□□□□ 0.52
HDDC2-204ENST00000608295 KCNJ4P48050 445 aa18.27■□□□□ 0.52
HDDC2-204ENST00000608295 CCT4P50991 539 aaKnown RBP18.27■□□□□ 0.52
HDDC2-204ENST00000608295 CCDC57Q2TAC2 916 aa18.27■□□□□ 0.52
HDDC2-204ENST00000608295 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.52
HDDC2-204ENST00000608295 KAZALD1Q96I82 304 aa18.27■□□□□ 0.52
HDDC2-204ENST00000608295 GPRC5DQ9NZD1 345 aa18.27■□□□□ 0.52
HDDC2-204ENST00000608295 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
HDDC2-204ENST00000608295 CHRNDQ07001 517 aa18.26■□□□□ 0.51
HDDC2-204ENST00000608295 TNIP1Q15025 636 aa18.26■□□□□ 0.51
HDDC2-204ENST00000608295 CEP350Q5VT06 3117 aa18.26■□□□□ 0.51
HDDC2-204ENST00000608295 BCAR3O75815 825 aa18.25■□□□□ 0.51
HDDC2-204ENST00000608295 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
HDDC2-204ENST00000608295 PNMA8AQ86V59 439 aaPredicted RBP18.25■□□□□ 0.51
HDDC2-204ENST00000608295 TXNRD3Q86VQ6 643 aa18.25■□□□□ 0.51
HDDC2-204ENST00000608295 MICALL2Q8IY33 904 aa18.25■□□□□ 0.51
HDDC2-204ENST00000608295 TRPM4Q8TD43 1214 aa18.25■□□□□ 0.51
HDDC2-204ENST00000608295 CNNM1Q9NRU3 951 aa18.25■□□□□ 0.51
HDDC2-204ENST00000608295 ZNF646O15015 1829 aaPredicted RBP18.24■□□□□ 0.51
HDDC2-204ENST00000608295 FMR1Q06787 632 aaKnown RBP eCLIP18.24■□□□□ 0.51
HDDC2-204ENST00000608295 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
HDDC2-204ENST00000608295 PUS3Q9BZE2 481 aaKnown RBP18.24■□□□□ 0.51
HDDC2-204ENST00000608295 MED23Q9ULK4 1368 aa18.24■□□□□ 0.51
HDDC2-204ENST00000608295 ZNF804BA4D1E1 1349 aa18.23■□□□□ 0.51
HDDC2-204ENST00000608295 KIF16BQ96L93 1317 aa18.23■□□□□ 0.51
HDDC2-204ENST00000608295 RBM26Q5T8P6 1007 aaKnown RBP18.23■□□□□ 0.51
HDDC2-204ENST00000608295 KLHDC4Q8TBB5 520 aa18.23■□□□□ 0.51
HDDC2-204ENST00000608295 CLUAP1Q96AJ1 413 aa18.23■□□□□ 0.51
HDDC2-204ENST00000608295 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
HDDC2-204ENST00000608295 ADARB2Q9NS39 739 aaKnown RBP18.23■□□□□ 0.51
HDDC2-204ENST00000608295 UTYO14607 1347 aa18.23■□□□□ 0.51
HDDC2-204ENST00000608295 ZBED9Q6R2W3 1325 aa18.23■□□□□ 0.51
HDDC2-204ENST00000608295 EGFRP00533 1210 aa18.22■□□□□ 0.51
HDDC2-204ENST00000608295 TBC1D10BQ4KMP7 808 aaPredicted RBP18.22■□□□□ 0.51
HDDC2-204ENST00000608295 LDHAL6AQ6ZMR3 332 aa18.22■□□□□ 0.51
HDDC2-204ENST00000608295 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
HDDC2-204ENST00000608295 ANKRD2Q9GZV1 360 aa18.22■□□□□ 0.51
HDDC2-204ENST00000608295 USP44Q9H0E7 712 aa18.22■□□□□ 0.51
HDDC2-204ENST00000608295 CNOT7Q9UIV1 285 aaKnown RBP18.22■□□□□ 0.51
HDDC2-204ENST00000608295 SAMD7Q7Z3H4 446 aa18.21■□□□□ 0.51
HDDC2-204ENST00000608295 CNTROBQ8N137 903 aa18.21■□□□□ 0.51
HDDC2-204ENST00000608295 TRAF5O00463 557 aa18.2■□□□□ 0.5
HDDC2-204ENST00000608295 UBTFL1P0CB47 393 aaPredicted RBP18.2■□□□□ 0.5
HDDC2-204ENST00000608295 MEIS3Q99687 375 aa18.2■□□□□ 0.5
HDDC2-204ENST00000608295 JAG2Q9Y219 1238 aa18.2■□□□□ 0.5
HDDC2-204ENST00000608295 LEMD3Q9Y2U8 911 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms