RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 POLLQ9UGP5 575 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 NSFL1CQ9UNZ2 370 aaKnown RBP13.2□□□□□ -0.3
LINC01001-203ENST00000607448 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 KIAA2012Q0VF49 1180 aa13.19□□□□□ -0.3
LINC01001-203ENST00000607448 CCDC152Q4G0S7 254 aa13.19□□□□□ -0.3
LINC01001-203ENST00000607448 TMC4Q7Z404 712 aa13.19□□□□□ -0.3
LINC01001-203ENST00000607448 NIM1KQ8IY84 436 aa13.19□□□□□ -0.3
LINC01001-203ENST00000607448 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
LINC01001-203ENST00000607448 GREM2Q9H772 168 aa13.19□□□□□ -0.3
LINC01001-203ENST00000607448 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
LINC01001-203ENST00000607448 SCNN1DP51172 638 aa13.18□□□□□ -0.3
LINC01001-203ENST00000607448 EIF6P56537 245 aaKnown RBP13.18□□□□□ -0.3
LINC01001-203ENST00000607448 C8orf34Q49A92 452 aa13.18□□□□□ -0.3
LINC01001-203ENST00000607448 BEND3Q5T5X7 828 aa13.18□□□□□ -0.3
LINC01001-203ENST00000607448 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
LINC01001-203ENST00000607448 IQCA1LA6NCM1 817 aa13.17□□□□□ -0.3
LINC01001-203ENST00000607448 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
LINC01001-203ENST00000607448 APLP1P51693 650 aa13.17□□□□□ -0.3
LINC01001-203ENST00000607448 CXCL9Q07325 125 aa13.17□□□□□ -0.3
LINC01001-203ENST00000607448 SUPT20HQ8NEM7 779 aa13.17□□□□□ -0.3
LINC01001-203ENST00000607448 HACL1Q9UJ83 578 aa13.17□□□□□ -0.3
LINC01001-203ENST00000607448 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
LINC01001-203ENST00000607448 EPHX2P34913 555 aa13.16□□□□□ -0.3
LINC01001-203ENST00000607448 EPS15P42566 896 aa13.16□□□□□ -0.3
LINC01001-203ENST00000607448 NBR1Q14596 966 aa13.16□□□□□ -0.3
LINC01001-203ENST00000607448 EAPPQ56P03 285 aaPredicted RBP13.16□□□□□ -0.3
LINC01001-203ENST00000607448 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
LINC01001-203ENST00000607448 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
LINC01001-203ENST00000607448 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
LINC01001-203ENST00000607448 VPS33BQ9H267 617 aa13.16□□□□□ -0.3
LINC01001-203ENST00000607448 DBNDD1Q9H9R9 158 aa13.16□□□□□ -0.3
LINC01001-203ENST00000607448 ZNRF3Q9ULT6 936 aa13.16□□□□□ -0.3
LINC01001-203ENST00000607448 RAD17O75943 681 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 HSP90B1P14625 803 aaKnown RBP13.15□□□□□ -0.3
LINC01001-203ENST00000607448 DEKP35659 375 aaKnown RBP13.15□□□□□ -0.3
LINC01001-203ENST00000607448 WASHC4Q2M389 1173 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 DNAJC5GQ8N7S2 189 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 SSH1Q8WYL5 1049 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 C6orf229H3BNL8 230 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 ANKRD18AQ8IVF6 992 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 PANK1Q8TE04 598 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 PLA2G12BQ9BX93 195 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 PODXL2Q9NZ53 605 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 COG6Q9Y2V7 657 aa13.15□□□□□ -0.3
LINC01001-203ENST00000607448 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
LINC01001-203ENST00000607448 SHTN1A0MZ66 631 aa13.14□□□□□ -0.31
LINC01001-203ENST00000607448 FOXO4P98177 505 aa13.14□□□□□ -0.31
LINC01001-203ENST00000607448 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
LINC01001-203ENST00000607448 EPHA10Q5JZY3 1008 aa13.14□□□□□ -0.31
LINC01001-203ENST00000607448 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
LINC01001-203ENST00000607448 LDHDQ86WU2 507 aa13.14□□□□□ -0.31
LINC01001-203ENST00000607448 SKAP1Q86WV1 359 aa13.14□□□□□ -0.31
LINC01001-203ENST00000607448 ANKIB1Q9P2G1 1089 aa13.14□□□□□ -0.31
LINC01001-203ENST00000607448 DAXXQ9UER7 740 aaPredicted RBP13.14□□□□□ -0.31
LINC01001-203ENST00000607448 TRPM7Q96QT4 1865 aa13.13□□□□□ -0.31
LINC01001-203ENST00000607448 UFL1O94874 794 aa13.13□□□□□ -0.31
LINC01001-203ENST00000607448 IGHDP01880 384 aa13.13□□□□□ -0.31
LINC01001-203ENST00000607448 CSF1RP07333 972 aa13.13□□□□□ -0.31
LINC01001-203ENST00000607448 ITGA6P23229 1130 aa13.13□□□□□ -0.31
LINC01001-203ENST00000607448 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
LINC01001-203ENST00000607448 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
LINC01001-203ENST00000607448 MINPP1Q9UNW1 487 aa13.13□□□□□ -0.31
LINC01001-203ENST00000607448 POLR2AP24928 1970 aaKnown RBP13.13□□□□□ -0.31
LINC01001-203ENST00000607448 ECE2O60344 883 aa13.12□□□□□ -0.31
LINC01001-203ENST00000607448 RGS3P49796 1198 aa13.12□□□□□ -0.31
LINC01001-203ENST00000607448 GMPSP49915 693 aaPredicted RBP13.12□□□□□ -0.31
LINC01001-203ENST00000607448 ZKSCAN2Q63HK3 967 aa13.12□□□□□ -0.31
LINC01001-203ENST00000607448 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
LINC01001-203ENST00000607448 CDC5LQ99459 802 aaKnown RBP13.12□□□□□ -0.31
LINC01001-203ENST00000607448 RWDD1Q9H446 243 aaPredicted RBP13.12□□□□□ -0.31
LINC01001-203ENST00000607448 GPRC5DQ9NZD1 345 aa13.12□□□□□ -0.31
LINC01001-203ENST00000607448 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
LINC01001-203ENST00000607448 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
LINC01001-203ENST00000607448 XDHP47989 1333 aa13.12□□□□□ -0.31
LINC01001-203ENST00000607448 PASKQ96RG2 1323 aa13.12□□□□□ -0.31
LINC01001-203ENST00000607448 GRM8O00222 908 aa13.11□□□□□ -0.31
LINC01001-203ENST00000607448 PSMD14O00487 310 aa13.11□□□□□ -0.31
LINC01001-203ENST00000607448 ITGBL1O95965 494 aaPredicted RBP13.11□□□□□ -0.31
LINC01001-203ENST00000607448 LMOD1P29536 600 aaPredicted RBP13.11□□□□□ -0.31
LINC01001-203ENST00000607448 FMR1Q06787 632 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC01001-203ENST00000607448 KAZALD1Q96I82 304 aa13.11□□□□□ -0.31
LINC01001-203ENST00000607448 BSDC1Q9NW68 430 aaPredicted RBP13.11□□□□□ -0.31
LINC01001-203ENST00000607448 GGA1Q9UJY5 639 aa13.11□□□□□ -0.31
LINC01001-203ENST00000607448 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
LINC01001-203ENST00000607448 PNMA8AQ86V59 439 aaPredicted RBP13.11□□□□□ -0.31
LINC01001-203ENST00000607448 EYA3Q99504 573 aa13.11□□□□□ -0.31
LINC01001-203ENST00000607448 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
LINC01001-203ENST00000607448 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
LINC01001-203ENST00000607448 TXNRD3Q86VQ6 643 aa13.1□□□□□ -0.31
LINC01001-203ENST00000607448 SUCLG2Q96I99 432 aa13.1□□□□□ -0.31
LINC01001-203ENST00000607448 ZC3H12CQ9C0D7 883 aaKnown RBP13.1□□□□□ -0.31
LINC01001-203ENST00000607448 SNAP23O00161 211 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 ALDH1L1O75891 902 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 EGFRP00533 1210 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 KLRK1P26718 216 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 IGHMBP2P38935 993 aaKnown RBP13.09□□□□□ -0.31
LINC01001-203ENST00000607448 CCT4P50991 539 aaKnown RBP13.09□□□□□ -0.31
LINC01001-203ENST00000607448 HIRAP54198 1017 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms