RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 PSMD1Q99460 953 aa17.86■□□□□ 0.45
CTSA-211ENST00000606066 CHMP4BQ9H444 224 aaKnown RBP17.86■□□□□ 0.45
CTSA-211ENST00000606066 BSDC1Q9NW68 430 aaPredicted RBP17.86■□□□□ 0.45
CTSA-211ENST00000606066 SLX4Q8IY92 1834 aa17.86■□□□□ 0.45
CTSA-211ENST00000606066 GNAI2P04899 355 aa17.85■□□□□ 0.45
CTSA-211ENST00000606066 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
CTSA-211ENST00000606066 MPNDQ8N594 471 aa17.85■□□□□ 0.45
CTSA-211ENST00000606066 ANKRD44Q8N8A2 993 aa17.85■□□□□ 0.45
CTSA-211ENST00000606066 SUPT20HQ8NEM7 779 aa17.85■□□□□ 0.45
CTSA-211ENST00000606066 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
CTSA-211ENST00000606066 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
CTSA-211ENST00000606066 DDX19BQ9UMR2 479 aa17.84■□□□□ 0.45
CTSA-211ENST00000606066 NSFL1CQ9UNZ2 370 aaKnown RBP17.84■□□□□ 0.45
CTSA-211ENST00000606066 ZBTB7BO15156 539 aaPredicted RBP17.83■□□□□ 0.44
CTSA-211ENST00000606066 RRP1P56182 461 aaKnown RBP17.82■□□□□ 0.44
CTSA-211ENST00000606066 LDHAL6AQ6ZMR3 332 aa17.82■□□□□ 0.44
CTSA-211ENST00000606066 TNS4Q8IZW8 715 aa17.82■□□□□ 0.44
CTSA-211ENST00000606066 RTFDC1Q9BY42 306 aaPredicted RBP17.82■□□□□ 0.44
CTSA-211ENST00000606066 VPS33BQ9H267 617 aa17.82■□□□□ 0.44
CTSA-211ENST00000606066 ANKIB1Q9P2G1 1089 aa17.82■□□□□ 0.44
CTSA-211ENST00000606066 COG6Q9Y2V7 657 aa17.82■□□□□ 0.44
CTSA-211ENST00000606066 GPSM2P81274 684 aa17.81■□□□□ 0.44
CTSA-211ENST00000606066 ANKRD2Q9GZV1 360 aa17.81■□□□□ 0.44
CTSA-211ENST00000606066 PODXL2Q9NZ53 605 aa17.81■□□□□ 0.44
CTSA-211ENST00000606066 MINPP1Q9UNW1 487 aa17.81■□□□□ 0.44
CTSA-211ENST00000606066 WDR90Q96KV7 1748 aa17.81■□□□□ 0.44
CTSA-211ENST00000606066 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
CTSA-211ENST00000606066 HSPA1AP0DMV8 641 aaKnown RBP17.8■□□□□ 0.44
CTSA-211ENST00000606066 HSPA1BP0DMV9 641 aaKnown RBP17.8■□□□□ 0.44
CTSA-211ENST00000606066 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
CTSA-211ENST00000606066 CHADLQ6NUI6 762 aa17.8■□□□□ 0.44
CTSA-211ENST00000606066 EYA3Q99504 573 aa17.8■□□□□ 0.44
CTSA-211ENST00000606066 ZNF277Q9NRM2 450 aaPredicted RBP17.8■□□□□ 0.44
CTSA-211ENST00000606066 CNNM1Q9NRU3 951 aa17.8■□□□□ 0.44
CTSA-211ENST00000606066 CREBZFQ9NS37 354 aa17.8■□□□□ 0.44
CTSA-211ENST00000606066 XDHP47989 1333 aa17.79■□□□□ 0.44
CTSA-211ENST00000606066 C6orf229H3BNL8 230 aa17.79■□□□□ 0.44
CTSA-211ENST00000606066 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
CTSA-211ENST00000606066 MTX1Q13505 466 aa17.79■□□□□ 0.44
CTSA-211ENST00000606066 ZNF594Q96JF6 807 aaPredicted RBP17.79■□□□□ 0.44
CTSA-211ENST00000606066 GGA1Q9UJY5 639 aa17.79■□□□□ 0.44
CTSA-211ENST00000606066 MYH3P11055 1940 aa17.78■□□□□ 0.44
CTSA-211ENST00000606066 SRGAP3O43295 1099 aa17.78■□□□□ 0.44
CTSA-211ENST00000606066 C20orf194Q5TEA3 1177 aa17.78■□□□□ 0.44
CTSA-211ENST00000606066 SLC51AQ86UW1 340 aa17.78■□□□□ 0.44
CTSA-211ENST00000606066 TBC1D16Q8TBP0 767 aa17.78■□□□□ 0.44
CTSA-211ENST00000606066 CACNA1SQ13698 1873 aa17.78■□□□□ 0.44
CTSA-211ENST00000606066 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
CTSA-211ENST00000606066 DDNO94850 711 aaPredicted RBP17.77■□□□□ 0.44
CTSA-211ENST00000606066 UFL1O94874 794 aa17.77■□□□□ 0.44
CTSA-211ENST00000606066 CHRNDQ07001 517 aa17.77■□□□□ 0.44
CTSA-211ENST00000606066 WASHC4Q2M389 1173 aa17.77■□□□□ 0.44
CTSA-211ENST00000606066 LARGE2Q8N3Y3 721 aa17.77■□□□□ 0.44
CTSA-211ENST00000606066 JDP2Q8WYK2 163 aa17.77■□□□□ 0.44
CTSA-211ENST00000606066 L3MBTL3Q96JM7 780 aaPredicted RBP17.77■□□□□ 0.44
CTSA-211ENST00000606066 FBXO3Q9UK99 471 aa17.77■□□□□ 0.44
CTSA-211ENST00000606066 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
CTSA-211ENST00000606066 SBF1O95248 1867 aa17.77■□□□□ 0.43
CTSA-211ENST00000606066 RFX5P48382 616 aaPredicted RBP17.76■□□□□ 0.43
CTSA-211ENST00000606066 PTPN12Q05209 780 aaKnown RBP17.76■□□□□ 0.43
CTSA-211ENST00000606066 ZC3H12CQ9C0D7 883 aaKnown RBP17.76■□□□□ 0.43
CTSA-211ENST00000606066 POLLQ9UGP5 575 aa17.76■□□□□ 0.43
CTSA-211ENST00000606066 COL4A1P02462 1669 aa17.76■□□□□ 0.43
CTSA-211ENST00000606066 MROH5Q6ZUA9 1318 aa17.75■□□□□ 0.43
CTSA-211ENST00000606066 IQCA1LA6NCM1 817 aa17.75■□□□□ 0.43
CTSA-211ENST00000606066 KCNJ4P48050 445 aa17.75■□□□□ 0.43
CTSA-211ENST00000606066 ATP8B2P98198 1209 aa17.75■□□□□ 0.43
CTSA-211ENST00000606066 KIAA2012Q0VF49 1180 aa17.75■□□□□ 0.43
CTSA-211ENST00000606066 C1orf115Q9H7X2 142 aa17.75■□□□□ 0.43
CTSA-211ENST00000606066 ZBTB40Q9NUA8 1239 aa17.75■□□□□ 0.43
CTSA-211ENST00000606066 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
CTSA-211ENST00000606066 EYA2O00167 538 aa17.74■□□□□ 0.43
CTSA-211ENST00000606066 AOC3Q16853 763 aa17.74■□□□□ 0.43
CTSA-211ENST00000606066 NIM1KQ8IY84 436 aa17.74■□□□□ 0.43
CTSA-211ENST00000606066 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
CTSA-211ENST00000606066 PUS3Q9BZE2 481 aaKnown RBP17.74■□□□□ 0.43
CTSA-211ENST00000606066 COPRSQ9NQ92 184 aa17.74■□□□□ 0.43
CTSA-211ENST00000606066 RIPOR2Q9Y4F9 1068 aa17.74■□□□□ 0.43
CTSA-211ENST00000606066 ZNF804BA4D1E1 1349 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 TAF1P21675 1872 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 LRRC37AA6NMS7 1700 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 G3V3G9 751 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 CIAO1O76071 339 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 POTEIP0CG38 1075 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 POTEJP0CG39 1038 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 METTL24Q5JXM2 366 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 DCAF8Q5TAQ9 597 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 LDHDQ86WU2 507 aa17.73■□□□□ 0.43
CTSA-211ENST00000606066 TAF1DQ9H5J8 278 aaPredicted RBP17.73■□□□□ 0.43
CTSA-211ENST00000606066 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
CTSA-211ENST00000606066 PASKQ96RG2 1323 aa17.72■□□□□ 0.43
CTSA-211ENST00000606066 RIMBP2O15034 1052 aa17.72■□□□□ 0.43
CTSA-211ENST00000606066 TAF5LO75529 589 aa17.72■□□□□ 0.43
CTSA-211ENST00000606066 IL15P40933 162 aaPredicted RBP17.72■□□□□ 0.43
CTSA-211ENST00000606066 LRRC24Q50LG9 513 aa17.72■□□□□ 0.43
CTSA-211ENST00000606066 RPAP2Q8IXW5 612 aaPredicted RBP17.72■□□□□ 0.43
CTSA-211ENST00000606066 HELBQ8NG08 1087 aaPredicted RBP17.72■□□□□ 0.43
CTSA-211ENST00000606066 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
CTSA-211ENST00000606066 FZD9O00144 591 aa17.71■□□□□ 0.43
CTSA-211ENST00000606066 CAPN15O75808 1086 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms