RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 C8orf58Q8NAV2 365 aa23.44■■□□□ 1.34
CCDC12-213ENST00000605875 PHAXQ9H814 394 aaKnown RBP23.44■■□□□ 1.34
CCDC12-213ENST00000605875 ECE2O60344 883 aa23.43■■□□□ 1.34
CCDC12-213ENST00000605875 DOK7Q18PE1 504 aa23.43■■□□□ 1.34
CCDC12-213ENST00000605875 ZBTB38Q8NAP3 1195 aaPredicted RBP23.43■■□□□ 1.34
CCDC12-213ENST00000605875 KCNQ5Q9NR82 932 aa23.43■■□□□ 1.34
CCDC12-213ENST00000605875 TSKSQ9UJT2 592 aa23.43■■□□□ 1.34
CCDC12-213ENST00000605875 TBC1D10BQ4KMP7 808 aaPredicted RBP23.42■■□□□ 1.34
CCDC12-213ENST00000605875 TBC1D16Q8TBP0 767 aa23.42■■□□□ 1.34
CCDC12-213ENST00000605875 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
CCDC12-213ENST00000605875 RPS12P25398 132 aaKnown RBP23.41■■□□□ 1.34
CCDC12-213ENST00000605875 MYD88Q99836 296 aa23.41■■□□□ 1.34
CCDC12-213ENST00000605875 SEC31BQ9NQW1 1179 aa23.41■■□□□ 1.34
CCDC12-213ENST00000605875 POLR2AP24928 1970 aaKnown RBP23.41■■□□□ 1.34
CCDC12-213ENST00000605875 RBM26Q5T8P6 1007 aaKnown RBP23.4■■□□□ 1.34
CCDC12-213ENST00000605875 DLK2Q6UY11 383 aa23.4■■□□□ 1.34
CCDC12-213ENST00000605875 TSPYL6Q8N831 410 aa23.4■■□□□ 1.34
CCDC12-213ENST00000605875 RTL9Q8NET4 1388 aa23.4■■□□□ 1.34
CCDC12-213ENST00000605875 CA12O43570 354 aa23.39■■□□□ 1.33
CCDC12-213ENST00000605875 EGFRP00533 1210 aa23.39■■□□□ 1.33
CCDC12-213ENST00000605875 BRPF1P55201 1214 aaPredicted RBP23.39■■□□□ 1.33
CCDC12-213ENST00000605875 KRT26Q7Z3Y9 468 aa23.39■■□□□ 1.33
CCDC12-213ENST00000605875 ZC3H12CQ9C0D7 883 aaKnown RBP23.39■■□□□ 1.33
CCDC12-213ENST00000605875 PODXL2Q9NZ53 605 aa23.39■■□□□ 1.33
CCDC12-213ENST00000605875 SALL2Q9Y467 1007 aaPredicted RBP23.39■■□□□ 1.33
CCDC12-213ENST00000605875 G3V3G9 751 aa23.38■■□□□ 1.33
CCDC12-213ENST00000605875 HUNKP57058 714 aa23.38■■□□□ 1.33
CCDC12-213ENST00000605875 DCAF8Q5TAQ9 597 aa23.38■■□□□ 1.33
CCDC12-213ENST00000605875 FAM9BQ8IZU0 186 aa23.38■■□□□ 1.33
CCDC12-213ENST00000605875 CCDC191Q8NCU4 936 aa23.38■■□□□ 1.33
CCDC12-213ENST00000605875 DCPSQ96C86 337 aaKnown RBP23.38■■□□□ 1.33
CCDC12-213ENST00000605875 ANKIB1Q9P2G1 1089 aa23.38■■□□□ 1.33
CCDC12-213ENST00000605875 IL16Q14005 1332 aa23.37■■□□□ 1.33
CCDC12-213ENST00000605875 UFL1O94874 794 aa23.37■■□□□ 1.33
CCDC12-213ENST00000605875 PCCAP05165 728 aaPredicted RBP23.37■■□□□ 1.33
CCDC12-213ENST00000605875 CCDC152Q4G0S7 254 aa23.37■■□□□ 1.33
CCDC12-213ENST00000605875 FANCIQ9NVI1 1328 aa23.36■■□□□ 1.33
CCDC12-213ENST00000605875 PDE8AO60658 829 aa23.36■■□□□ 1.33
CCDC12-213ENST00000605875 VIL1P09327 827 aaKnown RBP23.36■■□□□ 1.33
CCDC12-213ENST00000605875 NOGQ13253 232 aa23.36■■□□□ 1.33
CCDC12-213ENST00000605875 JARID2Q92833 1246 aaPredicted RBP23.36■■□□□ 1.33
CCDC12-213ENST00000605875 CWC25Q9NXE8 425 aaPredicted RBP23.36■■□□□ 1.33
CCDC12-213ENST00000605875 GGA1Q9UJY5 639 aa23.36■■□□□ 1.33
CCDC12-213ENST00000605875 SCN9AQ15858 1988 aa23.36■■□□□ 1.33
CCDC12-213ENST00000605875 KIF4BQ2VIQ3 1234 aa23.35■■□□□ 1.33
CCDC12-213ENST00000605875 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
CCDC12-213ENST00000605875 CCDC30Q5VVM6 783 aa23.35■■□□□ 1.33
CCDC12-213ENST00000605875 CASP8AP2Q9UKL3 1982 aa23.34■■□□□ 1.33
CCDC12-213ENST00000605875 CCDC85CA6NKD9 419 aa23.34■■□□□ 1.33
CCDC12-213ENST00000605875 ADM5C9JUS6 153 aa23.34■■□□□ 1.33
CCDC12-213ENST00000605875 DDX58O95786 925 aaKnown RBP23.34■■□□□ 1.33
CCDC12-213ENST00000605875 C2orf69Q8N8R5 385 aa23.34■■□□□ 1.33
CCDC12-213ENST00000605875 CCDC85AQ96PX6 553 aaPredicted RBP23.34■■□□□ 1.33
CCDC12-213ENST00000605875 ZIC5Q96T25 663 aa23.34■■□□□ 1.33
CCDC12-213ENST00000605875 METTL22Q9BUU2 404 aaPredicted RBP23.34■■□□□ 1.33
CCDC12-213ENST00000605875 GBA2Q9HCG7 927 aaPredicted RBP23.34■■□□□ 1.33
CCDC12-213ENST00000605875 TWISTNBQ3B726 338 aaPredicted RBP23.33■■□□□ 1.33
CCDC12-213ENST00000605875 CHMP4AQ9BY43 222 aa23.33■■□□□ 1.33
CCDC12-213ENST00000605875 RGMBQ6NW40 437 aa23.32■■□□□ 1.32
CCDC12-213ENST00000605875 ANKRD18AQ8IVF6 992 aa23.32■■□□□ 1.32
CCDC12-213ENST00000605875 SULF1Q8IWU6 871 aa23.31■■□□□ 1.32
CCDC12-213ENST00000605875 GGA3Q9NZ52 723 aa23.31■■□□□ 1.32
CCDC12-213ENST00000605875 FAM155AB1AL88 458 aaPredicted RBP23.3■■□□□ 1.32
CCDC12-213ENST00000605875 RSBN1LQ6PCB5 846 aaPredicted RBP23.3■■□□□ 1.32
CCDC12-213ENST00000605875 STK31Q9BXU1 1019 aa23.3■■□□□ 1.32
CCDC12-213ENST00000605875 MAP3K2Q9Y2U5 619 aa23.3■■□□□ 1.32
CCDC12-213ENST00000605875 XDHP47989 1333 aa23.3■■□□□ 1.32
CCDC12-213ENST00000605875 FAM161AQ3B820 660 aa23.29■■□□□ 1.32
CCDC12-213ENST00000605875 WDR63Q8IWG1 891 aa23.29■■□□□ 1.32
CCDC12-213ENST00000605875 AGBL3Q8NEM8 1001 aa23.29■■□□□ 1.32
CCDC12-213ENST00000605875 CCDC102AQ96A19 550 aa23.29■■□□□ 1.32
CCDC12-213ENST00000605875 MCOLN1Q9GZU1 580 aa23.29■■□□□ 1.32
CCDC12-213ENST00000605875 ASTN2O75129 1339 aaPredicted RBP23.29■■□□□ 1.32
CCDC12-213ENST00000605875 ATP2B4P23634 1241 aa23.28■■□□□ 1.32
CCDC12-213ENST00000605875 ZNF157P51786 506 aaPredicted RBP23.28■■□□□ 1.32
CCDC12-213ENST00000605875 PSME4Q14997 1843 aa23.28■■□□□ 1.32
CCDC12-213ENST00000605875 CTSWP56202 376 aa23.27■■□□□ 1.32
CCDC12-213ENST00000605875 ZNF280AP59817 542 aaPredicted RBP23.27■■□□□ 1.32
CCDC12-213ENST00000605875 KIF23Q02241 960 aaPredicted RBP23.27■■□□□ 1.32
CCDC12-213ENST00000605875 SCARF1Q14162 830 aa23.27■■□□□ 1.32
CCDC12-213ENST00000605875 KSR2Q6VAB6 950 aa23.27■■□□□ 1.32
CCDC12-213ENST00000605875 CDC5LQ99459 802 aaKnown RBP23.27■■□□□ 1.32
CCDC12-213ENST00000605875 ZNF609O15014 1411 aa23.26■■□□□ 1.31
CCDC12-213ENST00000605875 PI4KAP2A4QPH2 592 aa23.26■■□□□ 1.31
CCDC12-213ENST00000605875 DGKZQ13574 1117 aa23.26■■□□□ 1.31
CCDC12-213ENST00000605875 PI4KAP1Q8N8J0 262 aa23.26■■□□□ 1.31
CCDC12-213ENST00000605875 CDCA5Q96FF9 252 aa23.26■■□□□ 1.31
CCDC12-213ENST00000605875 SPINK5Q9NQ38 1064 aaPredicted RBP23.26■■□□□ 1.31
CCDC12-213ENST00000605875 IGKV5-2P06315 115 aa23.25■■□□□ 1.31
CCDC12-213ENST00000605875 ANGEL2Q5VTE6 544 aaKnown RBP23.25■■□□□ 1.31
CCDC12-213ENST00000605875 G2E3Q7L622 706 aa23.25■■□□□ 1.31
CCDC12-213ENST00000605875 PODNQ7Z5L7 613 aa23.25■■□□□ 1.31
CCDC12-213ENST00000605875 MYH3P11055 1940 aa23.24■■□□□ 1.31
CCDC12-213ENST00000605875 USP17L3A6NCW0 530 aa23.24■■□□□ 1.31
CCDC12-213ENST00000605875 USP17L4A6NCW7 530 aa23.24■■□□□ 1.31
CCDC12-213ENST00000605875 USP17L8P0C7I0 530 aa23.24■■□□□ 1.31
CCDC12-213ENST00000605875 NEXNQ0ZGT2 675 aa23.24■■□□□ 1.31
CCDC12-213ENST00000605875 USP17L1Q7RTZ2 530 aa23.24■■□□□ 1.31
CCDC12-213ENST00000605875 TTLL11Q8NHH1 800 aa23.24■■□□□ 1.31
CCDC12-213ENST00000605875 GMLQ99445 158 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms