RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 CPA1P15085 419 aa23.72■■□□□ 1.39
MMP28-201ENST00000605424 RPS6KB1P23443 525 aa23.72■■□□□ 1.39
MMP28-201ENST00000605424 DZIP3Q86Y13 1208 aaKnown RBP23.72■■□□□ 1.39
MMP28-201ENST00000605424 AK7Q96M32 723 aa23.72■■□□□ 1.39
MMP28-201ENST00000605424 GOLIM4O00461 696 aa23.71■■□□□ 1.39
MMP28-201ENST00000605424 VPS72Q15906 364 aa23.71■■□□□ 1.39
MMP28-201ENST00000605424 TTLL11Q8NHH1 800 aa23.71■■□□□ 1.39
MMP28-201ENST00000605424 GRPEL1Q9HAV7 217 aa23.71■■□□□ 1.39
MMP28-201ENST00000605424 NUP98P52948 1817 aa23.71■■□□□ 1.39
MMP28-201ENST00000605424 CICQ96RK0 1608 aaPredicted RBP23.71■■□□□ 1.39
MMP28-201ENST00000605424 MBD3O95983 291 aa23.71■■□□□ 1.39
MMP28-201ENST00000605424 CTSWP56202 376 aa23.71■■□□□ 1.39
MMP28-201ENST00000605424 RGS17Q9UGC6 210 aaPredicted RBP23.71■■□□□ 1.39
MMP28-201ENST00000605424 NDUFB9Q9Y6M9 179 aa23.71■■□□□ 1.39
MMP28-201ENST00000605424 KAT6BQ8WYB5 2073 aa23.7■■□□□ 1.38
MMP28-201ENST00000605424 GPTP24298 496 aa23.7■■□□□ 1.38
MMP28-201ENST00000605424 ZMYM1Q5SVZ6 1142 aa23.7■■□□□ 1.38
MMP28-201ENST00000605424 ZNF34Q8IZ26 560 aa23.7■■□□□ 1.38
MMP28-201ENST00000605424 DSCC1Q9BVC3 393 aa23.7■■□□□ 1.38
MMP28-201ENST00000605424 CCDC9Q9Y3X0 531 aaKnown RBP23.7■■□□□ 1.38
MMP28-201ENST00000605424 ANKRD18BA2A2Z9 1011 aa23.69■■□□□ 1.38
MMP28-201ENST00000605424 PDE8AO60658 829 aa23.69■■□□□ 1.38
MMP28-201ENST00000605424 EIF5P55010 431 aaKnown RBP23.69■■□□□ 1.38
MMP28-201ENST00000605424 TRMT112Q9UI30 125 aaKnown RBP23.69■■□□□ 1.38
MMP28-201ENST00000605424 MYH3P11055 1940 aa23.69■■□□□ 1.38
MMP28-201ENST00000605424 IRS4O14654 1257 aaPredicted RBP23.69■■□□□ 1.38
MMP28-201ENST00000605424 ZNF445P59923 1031 aa23.69■■□□□ 1.38
MMP28-201ENST00000605424 RIPOR2Q9Y4F9 1068 aa23.69■■□□□ 1.38
MMP28-201ENST00000605424 ATP6V1DQ9Y5K8 247 aa23.69■■□□□ 1.38
MMP28-201ENST00000605424 RNF113AO15541 343 aaKnown RBP23.68■■□□□ 1.38
MMP28-201ENST00000605424 STX6O43752 255 aa23.68■■□□□ 1.38
MMP28-201ENST00000605424 ZSCAN22P10073 491 aaPredicted RBP23.68■■□□□ 1.38
MMP28-201ENST00000605424 ITGA6P23229 1130 aa23.68■■□□□ 1.38
MMP28-201ENST00000605424 TTC39AQ5SRH9 613 aa23.68■■□□□ 1.38
MMP28-201ENST00000605424 GORABQ5T7V8 394 aa23.68■■□□□ 1.38
MMP28-201ENST00000605424 XAGE2Q96GT9 111 aa23.68■■□□□ 1.38
MMP28-201ENST00000605424 CCDC87Q9NVE4 849 aa23.68■■□□□ 1.38
MMP28-201ENST00000605424 LARGE1O95461 756 aa23.67■■□□□ 1.38
MMP28-201ENST00000605424 ZFYP08048 801 aaPredicted RBP23.67■■□□□ 1.38
MMP28-201ENST00000605424 ME3Q16798 604 aa23.67■■□□□ 1.38
MMP28-201ENST00000605424 CCDC83Q8IWF9 413 aa23.67■■□□□ 1.38
MMP28-201ENST00000605424 ATRNO75882 1429 aa23.67■■□□□ 1.38
MMP28-201ENST00000605424 RREB1Q92766 1687 aa23.67■■□□□ 1.38
MMP28-201ENST00000605424 HMGB1P09429 215 aaKnown RBP23.67■■□□□ 1.38
MMP28-201ENST00000605424 SYT1P21579 422 aa23.67■■□□□ 1.38
MMP28-201ENST00000605424 FOXD4L5Q5VV16 416 aaPredicted RBP23.67■■□□□ 1.38
MMP28-201ENST00000605424 LDHAL6AQ6ZMR3 332 aa23.67■■□□□ 1.38
MMP28-201ENST00000605424 MARCH10Q8NA82 808 aaPredicted RBP23.67■■□□□ 1.38
MMP28-201ENST00000605424 FOXD4L4Q8WXT5 416 aaPredicted RBP23.67■■□□□ 1.38
MMP28-201ENST00000605424 NEK1Q96PY6 1258 aa23.67■■□□□ 1.38
MMP28-201ENST00000605424 SEC62Q99442 399 aaKnown RBP23.67■■□□□ 1.38
MMP28-201ENST00000605424 QTRT2Q9H974 415 aaKnown RBP23.67■■□□□ 1.38
MMP28-201ENST00000605424 TPCN1Q9ULQ1 816 aa23.67■■□□□ 1.38
MMP28-201ENST00000605424 INTS5Q6P9B9 1019 aaKnown RBP23.66■■□□□ 1.38
MMP28-201ENST00000605424 LARP6Q9BRS8 491 aaKnown RBP23.66■■□□□ 1.38
MMP28-201ENST00000605424 SMARCC1Q92922 1105 aaPredicted RBP23.65■■□□□ 1.38
MMP28-201ENST00000605424 ZNF512BQ96KM6 892 aaPredicted RBP23.65■■□□□ 1.38
MMP28-201ENST00000605424 GREM2Q9H772 168 aa23.65■■□□□ 1.38
MMP28-201ENST00000605424 TBC1D2BQ9UPU7 963 aa23.65■■□□□ 1.38
MMP28-201ENST00000605424 NCLP19338 710 aaKnown RBP23.65■■□□□ 1.38
MMP28-201ENST00000605424 GJB2P29033 226 aa23.65■■□□□ 1.38
MMP28-201ENST00000605424 ATP6V1AP38606 617 aa23.65■■□□□ 1.38
MMP28-201ENST00000605424 METTL24Q5JXM2 366 aa23.65■■□□□ 1.38
MMP28-201ENST00000605424 CCDC129Q6ZRS4 1044 aa23.65■■□□□ 1.38
MMP28-201ENST00000605424 GPT2Q8TD30 523 aa23.65■■□□□ 1.38
MMP28-201ENST00000605424 RIC1Q4ADV7 1423 aa23.64■■□□□ 1.37
MMP28-201ENST00000605424 LOC102724428A0A0B4J2F2 783 aa23.64■■□□□ 1.37
MMP28-201ENST00000605424 SIK1P57059 783 aa23.64■■□□□ 1.37
MMP28-201ENST00000605424 ATP2B3Q16720 1220 aa23.64■■□□□ 1.37
MMP28-201ENST00000605424 CAVIN1Q6NZI2 390 aaKnown RBP23.64■■□□□ 1.37
MMP28-201ENST00000605424 GAS2L3Q86XJ1 694 aa23.64■■□□□ 1.37
MMP28-201ENST00000605424 SYNE4Q8N205 404 aa23.64■■□□□ 1.37
MMP28-201ENST00000605424 TMEM87AQ8NBN3 555 aa23.64■■□□□ 1.37
MMP28-201ENST00000605424 GJD4Q96KN9 370 aaPredicted RBP23.64■■□□□ 1.37
MMP28-201ENST00000605424 CYP21A2P08686 494 aa23.63■■□□□ 1.37
MMP28-201ENST00000605424 HSP90B1P14625 803 aaKnown RBP23.63■■□□□ 1.37
MMP28-201ENST00000605424 TOB2Q14106 344 aaPredicted RBP23.63■■□□□ 1.37
MMP28-201ENST00000605424 FAM98CQ17RN3 349 aaKnown RBP23.63■■□□□ 1.37
MMP28-201ENST00000605424 UBN2Q6ZU65 1347 aa23.63■■□□□ 1.37
MMP28-201ENST00000605424 PDCP20941 246 aa23.63■■□□□ 1.37
MMP28-201ENST00000605424 CRKLP46109 303 aaKnown RBP23.63■■□□□ 1.37
MMP28-201ENST00000605424 ZSCAN23Q3MJ62 389 aa23.63■■□□□ 1.37
MMP28-201ENST00000605424 PARP10Q53GL7 1025 aa23.63■■□□□ 1.37
MMP28-201ENST00000605424 CCDC85AQ96PX6 553 aaPredicted RBP23.63■■□□□ 1.37
MMP28-201ENST00000605424 CNNM1Q9NRU3 951 aa23.63■■□□□ 1.37
MMP28-201ENST00000605424 TRPC5Q9UL62 973 aaPredicted RBP23.63■■□□□ 1.37
MMP28-201ENST00000605424 TAF6LQ9Y6J9 622 aa23.63■■□□□ 1.37
MMP28-201ENST00000605424 F13A1P00488 732 aa23.62■■□□□ 1.37
MMP28-201ENST00000605424 ADORA1P30542 326 aa23.61■■□□□ 1.37
MMP28-201ENST00000605424 FKBP4Q02790 459 aaKnown RBP eCLIP23.61■■□□□ 1.37
MMP28-201ENST00000605424 ST3GAL1Q11201 340 aa23.61■■□□□ 1.37
MMP28-201ENST00000605424 CHGBP05060 677 aa23.61■■□□□ 1.37
MMP28-201ENST00000605424 VGLL2Q8N8G2 317 aa23.61■■□□□ 1.37
MMP28-201ENST00000605424 ACSBG1Q96GR2 724 aa23.61■■□□□ 1.37
MMP28-201ENST00000605424 MAST3O60307 1309 aa23.6■■□□□ 1.37
MMP28-201ENST00000605424 ZNF831Q5JPB2 1677 aa23.6■■□□□ 1.37
MMP28-201ENST00000605424 HSPD1P10809 573 aaKnown RBP23.6■■□□□ 1.37
MMP28-201ENST00000605424 PDE8BO95263 885 aa23.59■■□□□ 1.37
MMP28-201ENST00000605424 POTEAQ6S8J7 498 aa23.59■■□□□ 1.37
MMP28-201ENST00000605424 LRP5O75197 1615 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms