RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 NECTIN2Q92692 538 aa15.49■□□□□ 0.07
PDLIM1P1-201ENST00000604187 PLEKHF1Q96S99 279 aa15.49■□□□□ 0.07
PDLIM1P1-201ENST00000604187 HDAC9Q9UKV0 1011 aa15.49■□□□□ 0.07
PDLIM1P1-201ENST00000604187 PKN2Q16513 984 aaKnown RBP15.48■□□□□ 0.07
PDLIM1P1-201ENST00000604187 ANGEL2Q5VTE6 544 aaKnown RBP15.48■□□□□ 0.07
PDLIM1P1-201ENST00000604187 ZNF296Q8WUU4 475 aaPredicted RBP15.48■□□□□ 0.07
PDLIM1P1-201ENST00000604187 EYA3Q99504 573 aa15.48■□□□□ 0.07
PDLIM1P1-201ENST00000604187 TBC1D8O95759 1140 aa15.47■□□□□ 0.07
PDLIM1P1-201ENST00000604187 TBC1D16Q8TBP0 767 aa15.47■□□□□ 0.07
PDLIM1P1-201ENST00000604187 MAPK8IP3Q9UPT6 1336 aa15.46■□□□□ 0.07
PDLIM1P1-201ENST00000604187 VIL1P09327 827 aaKnown RBP15.46■□□□□ 0.07
PDLIM1P1-201ENST00000604187 FKBP1BP68106 108 aa15.46■□□□□ 0.07
PDLIM1P1-201ENST00000604187 SCARF1Q14162 830 aa15.46■□□□□ 0.07
PDLIM1P1-201ENST00000604187 ZNF280AP59817 542 aaPredicted RBP15.45■□□□□ 0.06
PDLIM1P1-201ENST00000604187 SF3B3Q15393 1217 aaKnown RBP15.45■□□□□ 0.06
PDLIM1P1-201ENST00000604187 MOB2Q70IA6 237 aa15.45■□□□□ 0.06
PDLIM1P1-201ENST00000604187 FAM89AQ96GI7 184 aa15.45■□□□□ 0.06
PDLIM1P1-201ENST00000604187 G3V3G9 751 aa15.44■□□□□ 0.06
PDLIM1P1-201ENST00000604187 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
PDLIM1P1-201ENST00000604187 ZC3H12CQ9C0D7 883 aaKnown RBP15.44■□□□□ 0.06
PDLIM1P1-201ENST00000604187 LRRC37AA6NMS7 1700 aa15.43■□□□□ 0.06
PDLIM1P1-201ENST00000604187 UBE2Q2LH0YL09 131 aa15.43■□□□□ 0.06
PDLIM1P1-201ENST00000604187 UFL1O94874 794 aa15.43■□□□□ 0.06
PDLIM1P1-201ENST00000604187 RTL5Q5HYW3 569 aaPredicted RBP15.43■□□□□ 0.06
PDLIM1P1-201ENST00000604187 GCC1Q96CN9 775 aa15.43■□□□□ 0.06
PDLIM1P1-201ENST00000604187 SCAF8Q9UPN6 1271 aaKnown RBP15.43■□□□□ 0.06
PDLIM1P1-201ENST00000604187 ATP5J2-PTCD1G3V325 749 aa15.42■□□□□ 0.06
PDLIM1P1-201ENST00000604187 GPR25O00155 361 aa15.42■□□□□ 0.06
PDLIM1P1-201ENST00000604187 RSBN1LQ6PCB5 846 aaPredicted RBP15.42■□□□□ 0.06
PDLIM1P1-201ENST00000604187 FBXO46Q6PJ61 603 aaPredicted RBP15.42■□□□□ 0.06
PDLIM1P1-201ENST00000604187 AGBL3Q8NEM8 1001 aa15.42■□□□□ 0.06
PDLIM1P1-201ENST00000604187 COL4A1P02462 1669 aa15.41■□□□□ 0.06
PDLIM1P1-201ENST00000604187 USP17L8P0C7I0 530 aa15.41■□□□□ 0.06
PDLIM1P1-201ENST00000604187 RPS8P62241 208 aaKnown RBP15.41■□□□□ 0.06
PDLIM1P1-201ENST00000604187 MKRN3Q13064 507 aaKnown RBP15.41■□□□□ 0.06
PDLIM1P1-201ENST00000604187 PRAMEF18Q5VWM3 479 aa15.41■□□□□ 0.06
PDLIM1P1-201ENST00000604187 MYOZ2Q9NPC6 264 aa15.41■□□□□ 0.06
PDLIM1P1-201ENST00000604187 CHPF2Q9P2E5 772 aa15.41■□□□□ 0.06
PDLIM1P1-201ENST00000604187 ANKIB1Q9P2G1 1089 aa15.41■□□□□ 0.06
PDLIM1P1-201ENST00000604187 PITPNM2Q9BZ72 1349 aa15.41■□□□□ 0.06
PDLIM1P1-201ENST00000604187 IRS4O14654 1257 aaPredicted RBP15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 TTLL12Q14166 644 aaPredicted RBP15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 KRT24Q2M2I5 525 aa15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 HABP4Q5JVS0 413 aaKnown RBP15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 PLBD2Q8NHP8 589 aa15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 PNNQ9H307 717 aaKnown RBP15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 BABAM1Q9NWV8 329 aa15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 PODXL2Q9NZ53 605 aa15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 GGA1Q9UJY5 639 aa15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 ZNF609O15014 1411 aa15.4■□□□□ 0.06
PDLIM1P1-201ENST00000604187 LAMB2P55268 1798 aa15.39■□□□□ 0.05
PDLIM1P1-201ENST00000604187 RIPK4P57078 832 aa15.39■□□□□ 0.05
PDLIM1P1-201ENST00000604187 NOM1Q5C9Z4 860 aaKnown RBP15.39■□□□□ 0.05
PDLIM1P1-201ENST00000604187 GMLQ99445 158 aa15.39■□□□□ 0.05
PDLIM1P1-201ENST00000604187 SEC31BQ9NQW1 1179 aa15.39■□□□□ 0.05
PDLIM1P1-201ENST00000604187 ANKRD36CQ5JPF3 1778 aa15.39■□□□□ 0.05
PDLIM1P1-201ENST00000604187 PAPPA2Q9BXP8 1791 aa15.39■□□□□ 0.05
PDLIM1P1-201ENST00000604187 FKTNO75072 461 aa15.38■□□□□ 0.05
PDLIM1P1-201ENST00000604187 TM4SF4P48230 202 aa15.38■□□□□ 0.05
PDLIM1P1-201ENST00000604187 SREBF2Q12772 1141 aa15.38■□□□□ 0.05
PDLIM1P1-201ENST00000604187 ANKRD13DQ6ZTN6 518 aa15.38■□□□□ 0.05
PDLIM1P1-201ENST00000604187 HTTP42858 3142 aa15.38■□□□□ 0.05
PDLIM1P1-201ENST00000604187 HDGFL1Q5TGJ6 251 aa15.37■□□□□ 0.05
PDLIM1P1-201ENST00000604187 R3HDMLQ9H3Y0 253 aa15.37■□□□□ 0.05
PDLIM1P1-201ENST00000604187 LMOD3Q0VAK6 560 aa15.36■□□□□ 0.05
PDLIM1P1-201ENST00000604187 NBPF9Q3BBW0 867 aa15.36■□□□□ 0.05
PDLIM1P1-201ENST00000604187 USP17L3A6NCW0 530 aa15.35■□□□□ 0.05
PDLIM1P1-201ENST00000604187 USP17L4A6NCW7 530 aa15.35■□□□□ 0.05
PDLIM1P1-201ENST00000604187 NF2P35240 595 aa15.35■□□□□ 0.05
PDLIM1P1-201ENST00000604187 USP17L1Q7RTZ2 530 aa15.35■□□□□ 0.05
PDLIM1P1-201ENST00000604187 CFHR5Q9BXR6 569 aa15.35■□□□□ 0.05
PDLIM1P1-201ENST00000604187 TRIM28Q13263 835 aaKnown RBP15.34■□□□□ 0.05
PDLIM1P1-201ENST00000604187 PRKG1Q13976 671 aa15.34■□□□□ 0.05
PDLIM1P1-201ENST00000604187 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
PDLIM1P1-201ENST00000604187 DBF4Q9UBU7 674 aaPredicted RBP15.34■□□□□ 0.05
PDLIM1P1-201ENST00000604187 XDHP47989 1333 aa15.34■□□□□ 0.05
PDLIM1P1-201ENST00000604187 MKI67P46013 3256 aaKnown RBP15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 POTEFA5A3E0 1075 aa15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 CHL1O00533 1208 aa15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 SASH1O94885 1247 aa15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 TMPOP42166 694 aaKnown RBP15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 PTPN12Q05209 780 aaKnown RBP15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 CCDC152Q4G0S7 254 aa15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 PODNQ7Z5L7 613 aa15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 ZBTB38Q8NAP3 1195 aaPredicted RBP15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 MXD3Q9BW11 206 aa15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 LAS1LQ9Y4W2 734 aaKnown RBP15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 TRIM17Q9Y577 477 aa15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 DDX60Q8IY21 1712 aaKnown RBP15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 TAF1P21675 1872 aa15.33■□□□□ 0.04
PDLIM1P1-201ENST00000604187 HSP90B1P14625 803 aaKnown RBP15.32■□□□□ 0.04
PDLIM1P1-201ENST00000604187 SPRYD7Q5W111 196 aa15.32■□□□□ 0.04
PDLIM1P1-201ENST00000604187 ARMC9Q7Z3E5 817 aa15.32■□□□□ 0.04
PDLIM1P1-201ENST00000604187 OGFOD1Q8N543 542 aa15.32■□□□□ 0.04
PDLIM1P1-201ENST00000604187 FBXW7Q969H0 707 aa15.32■□□□□ 0.04
PDLIM1P1-201ENST00000604187 HYPKQ9NX55 129 aa15.32■□□□□ 0.04
PDLIM1P1-201ENST00000604187 DLG5Q8TDM6 1919 aa15.31■□□□□ 0.04
PDLIM1P1-201ENST00000604187 SCN9AQ15858 1988 aa15.31■□□□□ 0.04
PDLIM1P1-201ENST00000604187 WTIPA6NIX2 430 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms