RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 ERC2O15083 957 aa15.52■□□□□ 0.08
HERPUD2-207ENST00000603731 LRRC24Q50LG9 513 aa15.52■□□□□ 0.08
HERPUD2-207ENST00000603731 LDHAL6AQ6ZMR3 332 aa15.52■□□□□ 0.08
HERPUD2-207ENST00000603731 ATG9AQ7Z3C6 839 aa15.52■□□□□ 0.08
HERPUD2-207ENST00000603731 NLGN1Q8N2Q7 840 aa15.52■□□□□ 0.08
HERPUD2-207ENST00000603731 JMYQ8N9B5 988 aa15.52■□□□□ 0.08
HERPUD2-207ENST00000603731 CNBD1Q8NA66 436 aa15.52■□□□□ 0.08
HERPUD2-207ENST00000603731 RTL9Q8NET4 1388 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 ABCC12Q96J65 1359 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 TTC41PQ6P2S7 1318 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 SERPINB2P05120 415 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 IGHMBP2P38935 993 aaKnown RBP15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 ST5P78524 1137 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 HTRA3P83110 453 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 SF3B3Q15393 1217 aaKnown RBP15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 TNNI3KQ59H18 835 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 EAF2Q96CJ1 260 aaPredicted RBP15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 KLRG1Q96E93 195 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 CDC5LQ99459 802 aaKnown RBP15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 MPHOSPH8Q99549 860 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 PUS3Q9BZE2 481 aaKnown RBP15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 CCDC8Q9H0W5 538 aaPredicted RBP15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 FPGT-TNNI3KV9GXZ4 949 aa15.51■□□□□ 0.07
HERPUD2-207ENST00000603731 GSPT1P15170 499 aaKnown RBP15.5■□□□□ 0.07
HERPUD2-207ENST00000603731 TM4SF1P30408 202 aa15.5■□□□□ 0.07
HERPUD2-207ENST00000603731 METTL24Q5JXM2 366 aa15.5■□□□□ 0.07
HERPUD2-207ENST00000603731 GPR108Q9NPR9 543 aa15.5■□□□□ 0.07
HERPUD2-207ENST00000603731 ECHDC1Q9NTX5 307 aa15.5■□□□□ 0.07
HERPUD2-207ENST00000603731 AKAP2Q9Y2D5 859 aa15.5■□□□□ 0.07
HERPUD2-207ENST00000603731 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
HERPUD2-207ENST00000603731 GLRX3O76003 335 aaKnown RBP15.49■□□□□ 0.07
HERPUD2-207ENST00000603731 TOMM70O94826 608 aa15.49■□□□□ 0.07
HERPUD2-207ENST00000603731 TSHZ3Q63HK5 1081 aa15.49■□□□□ 0.07
HERPUD2-207ENST00000603731 CCDC24Q8N4L8 307 aa15.49■□□□□ 0.07
HERPUD2-207ENST00000603731 NEUROD6Q96NK8 337 aa15.49■□□□□ 0.07
HERPUD2-207ENST00000603731 SEC31BQ9NQW1 1179 aa15.49■□□□□ 0.07
HERPUD2-207ENST00000603731 CDC45O75419 566 aa15.48■□□□□ 0.07
HERPUD2-207ENST00000603731 SDSP20132 328 aa15.48■□□□□ 0.07
HERPUD2-207ENST00000603731 CASC1Q6TDU7 716 aa15.48■□□□□ 0.07
HERPUD2-207ENST00000603731 ANKRD18AQ8IVF6 992 aa15.48■□□□□ 0.07
HERPUD2-207ENST00000603731 RIPOR2Q9Y4F9 1068 aa15.48■□□□□ 0.07
HERPUD2-207ENST00000603731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.48■□□□□ 0.07
HERPUD2-207ENST00000603731 TAF1P21675 1872 aa15.48■□□□□ 0.07
HERPUD2-207ENST00000603731 MROH5Q6ZUA9 1318 aa15.47■□□□□ 0.07
HERPUD2-207ENST00000603731 EIF5BO60841 1220 aaKnown RBP15.47■□□□□ 0.07
HERPUD2-207ENST00000603731 PRR5LQ6MZQ0 368 aa15.47■□□□□ 0.07
HERPUD2-207ENST00000603731 RILPL2Q969X0 211 aa15.47■□□□□ 0.07
HERPUD2-207ENST00000603731 PARP3Q9Y6F1 533 aa15.47■□□□□ 0.07
HERPUD2-207ENST00000603731 ZNF609O15014 1411 aa15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 RIC1Q4ADV7 1423 aa15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 POLRMTO00411 1230 aaKnown RBP15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 DDR1Q08345 913 aa15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 MSL1Q68DK7 614 aa15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 C3orf67Q6ZVT6 689 aa15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 DDX46Q7L014 1031 aaKnown RBP15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 CNTROBQ8N137 903 aa15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 PI4K2BQ8TCG2 481 aa15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 UPF2Q9HAU5 1272 aaKnown RBP15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 TLR7Q9NYK1 1049 aaKnown RBP15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 RBM19Q9Y4C8 960 aaKnown RBP15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 TNRC6CQ9HCJ0 1690 aaKnown RBP15.46■□□□□ 0.07
HERPUD2-207ENST00000603731 A0A1B0GUL7 405 aa15.45■□□□□ 0.06
HERPUD2-207ENST00000603731 GORABQ5T7V8 394 aa15.45■□□□□ 0.06
HERPUD2-207ENST00000603731 DBNDD2Q9BQY9 259 aa15.45■□□□□ 0.06
HERPUD2-207ENST00000603731 DBNLQ9UJU6 430 aaKnown RBP15.45■□□□□ 0.06
HERPUD2-207ENST00000603731 WWC3Q9ULE0 1092 aa15.45■□□□□ 0.06
HERPUD2-207ENST00000603731 CD2APQ9Y5K6 639 aa15.45■□□□□ 0.06
HERPUD2-207ENST00000603731 NRXN2Q9P2S2 1712 aa15.44■□□□□ 0.06
HERPUD2-207ENST00000603731 TIMM10P62072 90 aa15.44■□□□□ 0.06
HERPUD2-207ENST00000603731 ATP2B3Q16720 1220 aa15.44■□□□□ 0.06
HERPUD2-207ENST00000603731 RPGRQ92834 1020 aaKnown RBP15.44■□□□□ 0.06
HERPUD2-207ENST00000603731 PDE8BO95263 885 aa15.43■□□□□ 0.06
HERPUD2-207ENST00000603731 MAP4K4O95819 1239 aaPredicted RBP15.43■□□□□ 0.06
HERPUD2-207ENST00000603731 MMP10P09238 476 aa15.43■□□□□ 0.06
HERPUD2-207ENST00000603731 ATP5JP18859 108 aa15.43■□□□□ 0.06
HERPUD2-207ENST00000603731 RPS8P62241 208 aaKnown RBP15.43■□□□□ 0.06
HERPUD2-207ENST00000603731 CCDC158Q5M9N0 1113 aa15.43■□□□□ 0.06
HERPUD2-207ENST00000603731 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
HERPUD2-207ENST00000603731 A0A1B0GUL6 1792 aa15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 SLC5A1P13866 664 aa15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 PUM3Q15397 648 aaKnown RBP15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 TTC39AQ5SRH9 613 aa15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 HELBQ8NG08 1087 aaPredicted RBP15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 CELF1Q92879 486 aaKnown RBP15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 XAGE2Q96GT9 111 aa15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 RBM17Q96I25 401 aaKnown RBP15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 BOLA2Q9H3K6 86 aa15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 BSDC1Q9NW68 430 aaPredicted RBP15.42■□□□□ 0.06
HERPUD2-207ENST00000603731 ARAP2Q8WZ64 1704 aa15.41■□□□□ 0.06
HERPUD2-207ENST00000603731 MFAP1P55081 439 aaKnown RBP15.41■□□□□ 0.06
HERPUD2-207ENST00000603731 CHRNDQ07001 517 aa15.41■□□□□ 0.06
HERPUD2-207ENST00000603731 VGLL2Q8N8G2 317 aa15.41■□□□□ 0.06
HERPUD2-207ENST00000603731 LPIN2Q92539 896 aa15.41■□□□□ 0.06
HERPUD2-207ENST00000603731 EVI5LQ96CN4 794 aa15.41■□□□□ 0.06
HERPUD2-207ENST00000603731 NMRK2Q9NPI5 230 aa15.41■□□□□ 0.06
HERPUD2-207ENST00000603731 ANKRD31Q8N7Z5 1873 aa15.41■□□□□ 0.06
HERPUD2-207ENST00000603731 SEC24BO95487 1268 aa15.4■□□□□ 0.06
HERPUD2-207ENST00000603731 IFIT1P09914 478 aaKnown RBP15.4■□□□□ 0.06
HERPUD2-207ENST00000603731 GRAPQ13588 217 aa15.4■□□□□ 0.06
HERPUD2-207ENST00000603731 GRAPLQ8TC17 118 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms