RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 FAM89AQ96GI7 184 aa12.73□□□□□ -0.37
DDX55P1-201ENST00000603334 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
DDX55P1-201ENST00000603334 EXOC6BQ9Y2D4 811 aa12.73□□□□□ -0.37
DDX55P1-201ENST00000603334 UTYO14607 1347 aa12.73□□□□□ -0.37
DDX55P1-201ENST00000603334 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
DDX55P1-201ENST00000603334 SMARCA5O60264 1052 aaPredicted RBP12.72□□□□□ -0.37
DDX55P1-201ENST00000603334 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
DDX55P1-201ENST00000603334 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
DDX55P1-201ENST00000603334 SSH3Q8TE77 659 aa12.72□□□□□ -0.37
DDX55P1-201ENST00000603334 BICC1Q9H694 974 aaKnown RBP12.72□□□□□ -0.37
DDX55P1-201ENST00000603334 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
DDX55P1-201ENST00000603334 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
DDX55P1-201ENST00000603334 TAF1P21675 1872 aa12.72□□□□□ -0.37
DDX55P1-201ENST00000603334 H7C1W4 665 aa12.71□□□□□ -0.37
DDX55P1-201ENST00000603334 C21orf2O43822 256 aa12.71□□□□□ -0.37
DDX55P1-201ENST00000603334 BBOX1O75936 387 aa12.71□□□□□ -0.37
DDX55P1-201ENST00000603334 PDE4AP27815 886 aa12.71□□□□□ -0.37
DDX55P1-201ENST00000603334 C3orf67Q6ZVT6 689 aa12.71□□□□□ -0.37
DDX55P1-201ENST00000603334 SLC51AQ86UW1 340 aa12.71□□□□□ -0.37
DDX55P1-201ENST00000603334 PDE8AO60658 829 aa12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 HCLS1P14317 486 aaPredicted RBP12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 G3BP1Q13283 466 aaKnown RBP eCLIP12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 POLA2Q14181 598 aa12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 HSP90AB4PQ58FF6 505 aa12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 RTKN2Q8IZC4 609 aa12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 PLA2G12BQ9BX93 195 aa12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 TMX4Q9H1E5 349 aaPredicted RBP12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 NMRK2Q9NPI5 230 aa12.71□□□□□ -0.38
DDX55P1-201ENST00000603334 COL4A1P02462 1669 aa12.7□□□□□ -0.38
DDX55P1-201ENST00000603334 LTBP3Q9NS15 1303 aa12.7□□□□□ -0.38
DDX55P1-201ENST00000603334 WDR90Q96KV7 1748 aa12.7□□□□□ -0.38
DDX55P1-201ENST00000603334 RAB11FIP3O75154 756 aa12.7□□□□□ -0.38
DDX55P1-201ENST00000603334 EPHA10Q5JZY3 1008 aa12.7□□□□□ -0.38
DDX55P1-201ENST00000603334 OLFM4Q6UX06 510 aa12.7□□□□□ -0.38
DDX55P1-201ENST00000603334 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
DDX55P1-201ENST00000603334 COL4A5P29400 1685 aa12.69□□□□□ -0.38
DDX55P1-201ENST00000603334 LMNB1P20700 586 aa12.69□□□□□ -0.38
DDX55P1-201ENST00000603334 CCDC152Q4G0S7 254 aa12.69□□□□□ -0.38
DDX55P1-201ENST00000603334 CCDC93Q567U6 631 aa12.69□□□□□ -0.38
DDX55P1-201ENST00000603334 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
DDX55P1-201ENST00000603334 C16orf71Q8IYS4 520 aaPredicted RBP12.69□□□□□ -0.38
DDX55P1-201ENST00000603334 KAZALD1Q96I82 304 aa12.69□□□□□ -0.38
DDX55P1-201ENST00000603334 ZC3H4Q9UPT8 1303 aaKnown RBP12.68□□□□□ -0.38
DDX55P1-201ENST00000603334 MTX1Q13505 466 aa12.68□□□□□ -0.38
DDX55P1-201ENST00000603334 GRAPQ13588 217 aa12.68□□□□□ -0.38
DDX55P1-201ENST00000603334 FAM161AQ3B820 660 aa12.68□□□□□ -0.38
DDX55P1-201ENST00000603334 SYNE4Q8N205 404 aa12.68□□□□□ -0.38
DDX55P1-201ENST00000603334 GRAPLQ8TC17 118 aaPredicted RBP12.68□□□□□ -0.38
DDX55P1-201ENST00000603334 PA2G4Q9UQ80 394 aaKnown RBP12.68□□□□□ -0.38
DDX55P1-201ENST00000603334 RTL9Q8NET4 1388 aa12.68□□□□□ -0.38
DDX55P1-201ENST00000603334 CASP7P55210 303 aa12.67□□□□□ -0.38
DDX55P1-201ENST00000603334 CTSWP56202 376 aa12.67□□□□□ -0.38
DDX55P1-201ENST00000603334 KIF1BPQ96EK5 621 aa12.67□□□□□ -0.38
DDX55P1-201ENST00000603334 SIL1Q9H173 461 aa12.67□□□□□ -0.38
DDX55P1-201ENST00000603334 VPS33BQ9H267 617 aa12.67□□□□□ -0.38
DDX55P1-201ENST00000603334 IL1RAPL2Q9NP60 686 aa12.67□□□□□ -0.38
DDX55P1-201ENST00000603334 ATP6V0A2Q9Y487 856 aa12.67□□□□□ -0.38
DDX55P1-201ENST00000603334 MYH3P11055 1940 aa12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 POTECB2RU33 542 aa12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 PPEF1O14829 653 aaPredicted RBP12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 FOXO4P98177 505 aa12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 SP8Q8IXZ3 490 aa12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 RHPN1Q8TCX5 695 aa12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 PSMD1Q99460 953 aa12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 TAOK3Q9H2K8 898 aa12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 LRRC37AA6NMS7 1700 aa12.66□□□□□ -0.38
DDX55P1-201ENST00000603334 CSF1RP07333 972 aa12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 DSG3P32926 999 aa12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 TAF7LQ5H9L4 462 aa12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 PLEKHM2Q8IWE5 1019 aa12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 TTLL11Q8NHH1 800 aa12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 CCDC85AQ96PX6 553 aaPredicted RBP12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 CDC5LQ99459 802 aaKnown RBP12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 BACH2Q9BYV9 841 aa12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 NOP58Q9Y2X3 529 aaKnown RBP12.65□□□□□ -0.38
DDX55P1-201ENST00000603334 PCNTO95613 3336 aa12.64□□□□□ -0.39
DDX55P1-201ENST00000603334 GLTPD2A6NH11 291 aa12.64□□□□□ -0.39
DDX55P1-201ENST00000603334 RPS8P62241 208 aaKnown RBP12.64□□□□□ -0.39
DDX55P1-201ENST00000603334 CCDC57Q2TAC2 916 aa12.64□□□□□ -0.39
DDX55P1-201ENST00000603334 RABL6Q3YEC7 729 aaPredicted RBP12.64□□□□□ -0.39
DDX55P1-201ENST00000603334 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
DDX55P1-201ENST00000603334 KLHDC4Q8TBB5 520 aa12.64□□□□□ -0.39
DDX55P1-201ENST00000603334 LTBP1Q14766 1721 aa12.64□□□□□ -0.39
DDX55P1-201ENST00000603334 CLASRPQ8N2M8 674 aaKnown RBP12.63□□□□□ -0.39
DDX55P1-201ENST00000603334 OTUD7AQ8TE49 926 aaPredicted RBP12.63□□□□□ -0.39
DDX55P1-201ENST00000603334 RTFDC1Q9BY42 306 aaPredicted RBP12.63□□□□□ -0.39
DDX55P1-201ENST00000603334 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
DDX55P1-201ENST00000603334 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
DDX55P1-201ENST00000603334 DUOX1Q9NRD9 1551 aa12.63□□□□□ -0.39
DDX55P1-201ENST00000603334 TOMM70O94826 608 aa12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 ANKRD18AQ8IVF6 992 aa12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 RRAGCQ9HB90 399 aa12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 COPRSQ9NQ92 184 aa12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 SCN4AP35499 1836 aa12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 ADAMTSL1Q8N6G6 1762 aa12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 IFIT2P09913 472 aaKnown RBP12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 RFX5P48382 616 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms