RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 GGA1Q9UJY5 639 aa16.11■□□□□ 0.17
USE1-209ENST00000601592 TNNQ9UQP3 1299 aa16.11■□□□□ 0.17
USE1-209ENST00000601592 UTYO14607 1347 aa16.11■□□□□ 0.17
USE1-209ENST00000601592 UBTFL1P0CB47 393 aaPredicted RBP16.1■□□□□ 0.17
USE1-209ENST00000601592 TRIM27P14373 513 aa16.1■□□□□ 0.17
USE1-209ENST00000601592 WASHC4Q2M389 1173 aa16.1■□□□□ 0.17
USE1-209ENST00000601592 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
USE1-209ENST00000601592 USP44Q9H0E7 712 aa16.1■□□□□ 0.17
USE1-209ENST00000601592 BSDC1Q9NW68 430 aaPredicted RBP16.1■□□□□ 0.17
USE1-209ENST00000601592 POLLQ9UGP5 575 aa16.1■□□□□ 0.17
USE1-209ENST00000601592 GJA3Q9Y6H8 435 aa16.1■□□□□ 0.17
USE1-209ENST00000601592 XDHP47989 1333 aa16.1■□□□□ 0.17
USE1-209ENST00000601592 KIF3CO14782 793 aa16.09■□□□□ 0.17
USE1-209ENST00000601592 KIAA2012Q0VF49 1180 aa16.09■□□□□ 0.17
USE1-209ENST00000601592 TBC1D16Q8TBP0 767 aa16.09■□□□□ 0.17
USE1-209ENST00000601592 EYA3Q99504 573 aa16.09■□□□□ 0.17
USE1-209ENST00000601592 VPS33BQ9H267 617 aa16.09■□□□□ 0.17
USE1-209ENST00000601592 SCN4AP35499 1836 aa16.09■□□□□ 0.17
USE1-209ENST00000601592 G3V3G9 751 aa16.08■□□□□ 0.16
USE1-209ENST00000601592 FZD9O00144 591 aa16.08■□□□□ 0.16
USE1-209ENST00000601592 DCAF8Q5TAQ9 597 aa16.08■□□□□ 0.16
USE1-209ENST00000601592 FTSJ3Q8IY81 847 aaKnown RBP16.08■□□□□ 0.16
USE1-209ENST00000601592 KAZALD1Q96I82 304 aa16.08■□□□□ 0.16
USE1-209ENST00000601592 ZNF594Q96JF6 807 aaPredicted RBP16.08■□□□□ 0.16
USE1-209ENST00000601592 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.16
USE1-209ENST00000601592 MINPP1Q9UNW1 487 aa16.08■□□□□ 0.16
USE1-209ENST00000601592 MEIS3Q99687 375 aa16.07■□□□□ 0.16
USE1-209ENST00000601592 ZC3H12CQ9C0D7 883 aaKnown RBP16.07■□□□□ 0.16
USE1-209ENST00000601592 DBNDD1Q9H9R9 158 aa16.07■□□□□ 0.16
USE1-209ENST00000601592 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
USE1-209ENST00000601592 ZNRF3Q9ULT6 936 aa16.07■□□□□ 0.16
USE1-209ENST00000601592 VEGFAP15692 232 aaPredicted RBP16.06■□□□□ 0.16
USE1-209ENST00000601592 ATP2B4P23634 1241 aa16.06■□□□□ 0.16
USE1-209ENST00000601592 KCNJ4P48050 445 aa16.06■□□□□ 0.16
USE1-209ENST00000601592 DOK7Q18PE1 504 aa16.06■□□□□ 0.16
USE1-209ENST00000601592 INTS3Q68E01 1043 aaKnown RBP16.06■□□□□ 0.16
USE1-209ENST00000601592 LDHAL6AQ6ZMR3 332 aa16.06■□□□□ 0.16
USE1-209ENST00000601592 ANKRD44Q8N8A2 993 aa16.06■□□□□ 0.16
USE1-209ENST00000601592 SCN9AQ15858 1988 aa16.06■□□□□ 0.16
USE1-209ENST00000601592 PLIN1O60240 522 aa16.05■□□□□ 0.16
USE1-209ENST00000601592 RAD17O75943 681 aa16.05■□□□□ 0.16
USE1-209ENST00000601592 CHRNDQ07001 517 aa16.05■□□□□ 0.16
USE1-209ENST00000601592 RABL6Q3YEC7 729 aaPredicted RBP16.05■□□□□ 0.16
USE1-209ENST00000601592 GPC2Q8N158 579 aa16.05■□□□□ 0.16
USE1-209ENST00000601592 TMEM57Q8N5G2 664 aa16.05■□□□□ 0.16
USE1-209ENST00000601592 HELBQ8NG08 1087 aaPredicted RBP16.05■□□□□ 0.16
USE1-209ENST00000601592 ANKRD2Q9GZV1 360 aa16.05■□□□□ 0.16
USE1-209ENST00000601592 LRRFIP2Q9Y608 721 aaKnown RBP16.05■□□□□ 0.16
USE1-209ENST00000601592 PSME4Q14997 1843 aa16.04■□□□□ 0.16
USE1-209ENST00000601592 ECE2O60344 883 aa16.04■□□□□ 0.16
USE1-209ENST00000601592 C1QTNF8P60827 252 aa16.04■□□□□ 0.16
USE1-209ENST00000601592 RCAN3Q9UKA8 241 aa16.04■□□□□ 0.16
USE1-209ENST00000601592 HDAC5Q9UQL6 1122 aa16.04■□□□□ 0.16
USE1-209ENST00000601592 IQCA1LA6NCM1 817 aa16.03■□□□□ 0.16
USE1-209ENST00000601592 WTIPA6NIX2 430 aaPredicted RBP16.03■□□□□ 0.16
USE1-209ENST00000601592 YDJCA8MPS7 323 aa16.03■□□□□ 0.16
USE1-209ENST00000601592 TAF5LO75529 589 aa16.03■□□□□ 0.16
USE1-209ENST00000601592 TOMM70O94826 608 aa16.03■□□□□ 0.16
USE1-209ENST00000601592 GNAI3P08754 354 aa16.03■□□□□ 0.16
USE1-209ENST00000601592 CXCL9Q07325 125 aa16.03■□□□□ 0.16
USE1-209ENST00000601592 CIAPIN1Q6FI81 312 aa16.03■□□□□ 0.16
USE1-209ENST00000601592 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
USE1-209ENST00000601592 DZIP1LQ8IYY4 767 aaKnown RBP16.03■□□□□ 0.16
USE1-209ENST00000601592 MED23Q9ULK4 1368 aa16.02■□□□□ 0.16
USE1-209ENST00000601592 ZNF804BA4D1E1 1349 aa16.02■□□□□ 0.16
USE1-209ENST00000601592 POTECB2RU33 542 aa16.02■□□□□ 0.16
USE1-209ENST00000601592 LMOD1P29536 600 aaPredicted RBP16.02■□□□□ 0.16
USE1-209ENST00000601592 KLHDC4Q8TBB5 520 aa16.02■□□□□ 0.16
USE1-209ENST00000601592 L3MBTL3Q96JM7 780 aaPredicted RBP16.02■□□□□ 0.16
USE1-209ENST00000601592 PUS3Q9BZE2 481 aaKnown RBP16.02■□□□□ 0.16
USE1-209ENST00000601592 HACL1Q9UJ83 578 aa16.02■□□□□ 0.16
USE1-209ENST00000601592 LEMD3Q9Y2U8 911 aa16.02■□□□□ 0.16
USE1-209ENST00000601592 TNIP1Q15025 636 aa16.01■□□□□ 0.15
USE1-209ENST00000601592 EAPPQ56P03 285 aaPredicted RBP16.01■□□□□ 0.15
USE1-209ENST00000601592 SNAP23O00161 211 aa16■□□□□ 0.15
USE1-209ENST00000601592 RLBP1P12271 317 aa16■□□□□ 0.15
USE1-209ENST00000601592 PANK1Q8TE04 598 aa16■□□□□ 0.15
USE1-209ENST00000601592 FBXW7Q969H0 707 aa16■□□□□ 0.15
USE1-209ENST00000601592 PSMD14O00487 310 aa15.99■□□□□ 0.15
USE1-209ENST00000601592 GNAI2P04899 355 aa15.99■□□□□ 0.15
USE1-209ENST00000601592 KLRK1P26718 216 aa15.99■□□□□ 0.15
USE1-209ENST00000601592 EPHX2P34913 555 aa15.99■□□□□ 0.15
USE1-209ENST00000601592 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
USE1-209ENST00000601592 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
USE1-209ENST00000601592 METTL24Q5JXM2 366 aa15.99■□□□□ 0.15
USE1-209ENST00000601592 RBM46Q8TBY0 533 aaKnown RBP15.99■□□□□ 0.15
USE1-209ENST00000601592 SIL1Q9H173 461 aa15.99■□□□□ 0.15
USE1-209ENST00000601592 TAF1DQ9H5J8 278 aaPredicted RBP15.99■□□□□ 0.15
USE1-209ENST00000601592 KCNQ5Q9NR82 932 aa15.99■□□□□ 0.15
USE1-209ENST00000601592 SCNN1DP51172 638 aa15.98■□□□□ 0.15
USE1-209ENST00000601592 TXNRD3Q86VQ6 643 aa15.98■□□□□ 0.15
USE1-209ENST00000601592 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
USE1-209ENST00000601592 MYH13Q9UKX3 1938 aa15.98■□□□□ 0.15
USE1-209ENST00000601592 MROH5Q6ZUA9 1318 aa15.97■□□□□ 0.15
USE1-209ENST00000601592 POTEIP0CG38 1075 aa15.97■□□□□ 0.15
USE1-209ENST00000601592 POTEJP0CG39 1038 aa15.97■□□□□ 0.15
USE1-209ENST00000601592 MS4A1P11836 297 aa15.97■□□□□ 0.15
USE1-209ENST00000601592 EPS15P42566 896 aa15.97■□□□□ 0.15
USE1-209ENST00000601592 SMC1BQ8NDV3 1235 aa15.97■□□□□ 0.15
USE1-209ENST00000601592 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms