RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 ZC3H12CQ9C0D7 883 aaKnown RBP21.34■■□□□ 1.01
NOTCH3-205ENST00000600841 BSDC1Q9NW68 430 aaPredicted RBP21.34■■□□□ 1.01
NOTCH3-205ENST00000600841 XDHP47989 1333 aa21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 YDJCA8MPS7 323 aa21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 ALDH1L1O75891 902 aa21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 CSF1RP07333 972 aa21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 IGHMBP2P38935 993 aaKnown RBP21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 HTRA3P83110 453 aa21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 FAM161AQ3B820 660 aa21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 SSH1Q8WYL5 1049 aa21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 SRCIN1Q9C0H9 1055 aa21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 DBNDD1Q9H9R9 158 aa21.33■■□□□ 1.01
NOTCH3-205ENST00000600841 GRM8O00222 908 aa21.32■■□□□ 1
NOTCH3-205ENST00000600841 ITGA6P23229 1130 aa21.32■■□□□ 1
NOTCH3-205ENST00000600841 EPS15P42566 896 aa21.32■■□□□ 1
NOTCH3-205ENST00000600841 GMPSP49915 693 aaPredicted RBP21.32■■□□□ 1
NOTCH3-205ENST00000600841 C9orf78Q9NZ63 289 aaPredicted RBP21.32■■□□□ 1
NOTCH3-205ENST00000600841 GPRC5DQ9NZD1 345 aa21.32■■□□□ 1
NOTCH3-205ENST00000600841 ADAMTSL1Q8N6G6 1762 aa21.32■■□□□ 1
NOTCH3-205ENST00000600841 PTPRCP08575 1304 aa21.31■■□□□ 1
NOTCH3-205ENST00000600841 ECE2O60344 883 aa21.31■■□□□ 1
NOTCH3-205ENST00000600841 DOK7Q18PE1 504 aa21.31■■□□□ 1
NOTCH3-205ENST00000600841 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
NOTCH3-205ENST00000600841 DNAJC5GQ8N7S2 189 aa21.31■■□□□ 1
NOTCH3-205ENST00000600841 BCL2L13Q9BXK5 485 aa21.31■■□□□ 1
NOTCH3-205ENST00000600841 MINPP1Q9UNW1 487 aa21.31■■□□□ 1
NOTCH3-205ENST00000600841 G3V3G9 751 aa21.3■■□□□ 1
NOTCH3-205ENST00000600841 ATP2B4P23634 1241 aa21.3■■□□□ 1
NOTCH3-205ENST00000600841 DCAF8Q5TAQ9 597 aa21.3■■□□□ 1
NOTCH3-205ENST00000600841 USP50Q70EL3 339 aaPredicted RBP21.3■■□□□ 1
NOTCH3-205ENST00000600841 MPHOSPH8Q99549 860 aa21.3■■□□□ 1
NOTCH3-205ENST00000600841 ANKRD18BA2A2Z9 1011 aa21.29■■□□□ 1
NOTCH3-205ENST00000600841 CT47B1P0C2W7 299 aaPredicted RBP21.29■■□□□ 1
NOTCH3-205ENST00000600841 FOXO4P98177 505 aa21.29■■□□□ 1
NOTCH3-205ENST00000600841 ADARB2Q9NS39 739 aaKnown RBP21.29■■□□□ 1
NOTCH3-205ENST00000600841 SMC4Q9NTJ3 1288 aa21.29■■□□□ 1
NOTCH3-205ENST00000600841 CHMP3Q9Y3E7 222 aa21.29■■□□□ 1
NOTCH3-205ENST00000600841 PSMD14O00487 310 aa21.28■■□□□ 1
NOTCH3-205ENST00000600841 IFIT5Q13325 482 aaKnown RBP21.28■■□□□ 1
NOTCH3-205ENST00000600841 MAP1SQ66K74 1059 aaPredicted RBP21.27■■□□□ 1
NOTCH3-205ENST00000600841 CNTROBQ8N137 903 aa21.27■■□□□ 1
NOTCH3-205ENST00000600841 PASKQ96RG2 1323 aa21.27■□□□□ 0.99
NOTCH3-205ENST00000600841 ITGBL1O95965 494 aaPredicted RBP21.26■□□□□ 0.99
NOTCH3-205ENST00000600841 CCT4P50991 539 aaKnown RBP21.26■□□□□ 0.99
NOTCH3-205ENST00000600841 LMBR1LQ6UX01 489 aa21.26■□□□□ 0.99
NOTCH3-205ENST00000600841 KLRG1Q96E93 195 aa21.26■□□□□ 0.99
NOTCH3-205ENST00000600841 ANKRD2Q9GZV1 360 aa21.26■□□□□ 0.99
NOTCH3-205ENST00000600841 KCNQ5Q9NR82 932 aa21.26■□□□□ 0.99
NOTCH3-205ENST00000600841 SCN9AQ15858 1988 aa21.26■□□□□ 0.99
NOTCH3-205ENST00000600841 EPHA10Q5JZY3 1008 aa21.25■□□□□ 0.99
NOTCH3-205ENST00000600841 DPF2Q92785 391 aa21.25■□□□□ 0.99
NOTCH3-205ENST00000600841 CREBZFQ9NS37 354 aa21.25■□□□□ 0.99
NOTCH3-205ENST00000600841 CNOT7Q9UIV1 285 aaKnown RBP21.25■□□□□ 0.99
NOTCH3-205ENST00000600841 LEMD3Q9Y2U8 911 aa21.25■□□□□ 0.99
NOTCH3-205ENST00000600841 ZBTB12Q9Y330 459 aaPredicted RBP21.25■□□□□ 0.99
NOTCH3-205ENST00000600841 MED23Q9ULK4 1368 aa21.24■□□□□ 0.99
NOTCH3-205ENST00000600841 H7C1D1 291 aa21.24■□□□□ 0.99
NOTCH3-205ENST00000600841 RPS12P25398 132 aaKnown RBP21.24■□□□□ 0.99
NOTCH3-205ENST00000600841 CCDC57Q2TAC2 916 aa21.24■□□□□ 0.99
NOTCH3-205ENST00000600841 WTIPA6NIX2 430 aaPredicted RBP21.23■□□□□ 0.99
NOTCH3-205ENST00000600841 NBPF7P0C2Y1 421 aaPredicted RBP21.23■□□□□ 0.99
NOTCH3-205ENST00000600841 TAF7LQ5H9L4 462 aa21.23■□□□□ 0.99
NOTCH3-205ENST00000600841 MICALL2Q8IY33 904 aa21.23■□□□□ 0.99
NOTCH3-205ENST00000600841 UTYO14607 1347 aa21.23■□□□□ 0.99
NOTCH3-205ENST00000600841 PCNTO95613 3336 aa21.22■□□□□ 0.99
NOTCH3-205ENST00000600841 VIL1P09327 827 aaKnown RBP21.22■□□□□ 0.99
NOTCH3-205ENST00000600841 CHRNDQ07001 517 aa21.22■□□□□ 0.99
NOTCH3-205ENST00000600841 PODNQ7Z5L7 613 aa21.22■□□□□ 0.99
NOTCH3-205ENST00000600841 SUCLG2Q96I99 432 aa21.22■□□□□ 0.99
NOTCH3-205ENST00000600841 ZNF804BA4D1E1 1349 aa21.22■□□□□ 0.99
NOTCH3-205ENST00000600841 PSME4Q14997 1843 aa21.22■□□□□ 0.99
NOTCH3-205ENST00000600841 SHTN1A0MZ66 631 aa21.21■□□□□ 0.99
NOTCH3-205ENST00000600841 TMEM88BA6NKF7 163 aa21.21■□□□□ 0.99
NOTCH3-205ENST00000600841 KCNJ4P48050 445 aa21.21■□□□□ 0.99
NOTCH3-205ENST00000600841 BRPF1P55201 1214 aaPredicted RBP21.2■□□□□ 0.98
NOTCH3-205ENST00000600841 HNRNPUQ00839 825 aaKnown RBP eCLIP21.2■□□□□ 0.98
NOTCH3-205ENST00000600841 TRPM4Q8TD43 1214 aa21.2■□□□□ 0.98
NOTCH3-205ENST00000600841 KAZALD1Q96I82 304 aa21.2■□□□□ 0.98
NOTCH3-205ENST00000600841 ZC3H15Q8WU90 426 aaKnown RBP21.19■□□□□ 0.98
NOTCH3-205ENST00000600841 ZNF594Q96JF6 807 aaPredicted RBP21.19■□□□□ 0.98
NOTCH3-205ENST00000600841 NOB1Q9ULX3 412 aaKnown RBP21.19■□□□□ 0.98
NOTCH3-205ENST00000600841 USP17L3A6NCW0 530 aa21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 USP17L4A6NCW7 530 aa21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 RARSP54136 660 aaKnown RBP21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 HIRAP54198 1017 aaPredicted RBP21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 RSBN1LQ6PCB5 846 aaPredicted RBP21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 LDHAL6AQ6ZMR3 332 aa21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 USP17L1Q7RTZ2 530 aa21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 SAMD7Q7Z3H4 446 aa21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 JMYQ8N9B5 988 aa21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 COA1Q9GZY4 146 aa21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 BICC1Q9H694 974 aaKnown RBP21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 CNNM1Q9NRU3 951 aa21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 A0A1B0GUL6 1792 aa21.18■□□□□ 0.98
NOTCH3-205ENST00000600841 TAF5LO75529 589 aa21.17■□□□□ 0.98
NOTCH3-205ENST00000600841 TBC1D10BQ4KMP7 808 aaPredicted RBP21.17■□□□□ 0.98
NOTCH3-205ENST00000600841 TXNRD3Q86VQ6 643 aa21.17■□□□□ 0.98
NOTCH3-205ENST00000600841 AGBL3Q8NEM8 1001 aa21.17■□□□□ 0.98
NOTCH3-205ENST00000600841 HELBQ8NG08 1087 aaPredicted RBP21.17■□□□□ 0.98
NOTCH3-205ENST00000600841 API5Q9BZZ5 524 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms