RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 NIM1KQ8IY84 436 aa13.25□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 GPRC5DQ9NZD1 345 aa13.25□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 NCOR1O75376 2440 aa13.24□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 GMPSP49915 693 aaPredicted RBP13.24□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 HIRAP54198 1017 aaPredicted RBP13.24□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 TCIRG1Q13488 830 aa13.24□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 NEUROD2Q15784 382 aa13.24□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 DLK2Q6UY11 383 aa13.24□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 TRPM4Q8TD43 1214 aa13.24□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 BABAM1Q9NWV8 329 aa13.24□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 SPEF2Q9C093 1822 aa13.23□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 KIAA2012Q0VF49 1180 aa13.23□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 SP8Q8IXZ3 490 aa13.23□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 RAD17O75943 681 aa13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 SLC10A3P09131 477 aa13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 GRAPQ13588 217 aa13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 RALBP1Q15311 655 aa13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 GRIPAP1Q4V328 841 aa13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 GRAPLQ8TC17 118 aaPredicted RBP13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 CELF1Q92879 486 aaKnown RBP13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 ISCA1Q9BUE6 129 aa13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 ZNRF3Q9ULT6 936 aa13.22□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 SH3TC1Q8TE82 1336 aa13.21□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 TBC1D8O95759 1140 aa13.21□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 EGFRP00533 1210 aa13.21□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 DPP8Q6V1X1 898 aaPredicted RBP13.21□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 ANKRD13DQ6ZTN6 518 aa13.21□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 PNNQ9H307 717 aaKnown RBP13.21□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 ADARB2Q9NS39 739 aaKnown RBP13.21□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 TRMT112Q9UI30 125 aaKnown RBP13.21□□□□□ -0.29
MIA-RAB4B-201ENST00000600729 ATP5J2-PTCD1G3V325 749 aa13.2□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 DEFB123Q8N688 67 aa13.2□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 FAM89AQ96GI7 184 aa13.2□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 VPS33BQ9H267 617 aa13.2□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 KCNQ5Q9NR82 932 aa13.2□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 PGAP2Q9UHJ9 254 aa13.2□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 GPR25O00155 361 aa13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 BBOX1O75936 387 aa13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 HSP90AB3PQ58FF7 597 aa13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 PLBD2Q8NHP8 589 aa13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 MYH3P11055 1940 aa13.19□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 A0A1W2PPC1 479 aa13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 GPSM2P81274 684 aa13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 LMOD3Q0VAK6 560 aa13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 SF3B3Q15393 1217 aaKnown RBP13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 SUPT20HQ8NEM7 779 aa13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 RUNDC1Q96C34 613 aa13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 DBNDD1Q9H9R9 158 aa13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 MBIPQ9NS73 344 aa13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 POLLQ9UGP5 575 aa13.18□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 PSMD14O00487 310 aa13.17□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 ZNF853P0CG23 659 aa13.17□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 DUSP27Q5VZP5 1158 aa13.17□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 Q7L0L9 218 aa13.17□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 GBA2Q9HCG7 927 aaPredicted RBP13.17□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 SAMD7Q7Z3H4 446 aa13.16□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 MICALL2Q8IY33 904 aa13.16□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 PHAXQ9H814 394 aaKnown RBP13.16□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 CNOT7Q9UIV1 285 aaKnown RBP13.16□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 BDP1A6H8Y1 2624 aa13.15□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 FKTNO75072 461 aa13.15□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 HOXB7P09629 217 aa13.15□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 JARID2Q92833 1246 aaPredicted RBP13.15□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 ARMC5Q96C12 935 aa13.15□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
MIA-RAB4B-201ENST00000600729 A0A1B0GUL6 1792 aa13.15□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 IRS4O14654 1257 aaPredicted RBP13.14□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 C2orf69Q8N8R5 385 aa13.14□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 MTMR10Q9NXD2 777 aa13.14□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 DBF4Q9UBU7 674 aaPredicted RBP13.14□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 NSFL1CQ9UNZ2 370 aaKnown RBP13.14□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 WTIPA6NIX2 430 aaPredicted RBP13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 ADM5C9JUS6 153 aa13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 ECE2O60344 883 aa13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 TNIP1Q15025 636 aa13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 WASHC4Q2M389 1173 aa13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 USP48Q86UV5 1035 aa13.13□□□□□ -0.31
MIA-RAB4B-201ENST00000600729 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms