RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 ANKRD18BA2A2Z9 1011 aa17.02■□□□□ 0.32
ARHGEF1-222ENST00000600517 RIMBP2O15034 1052 aa17.02■□□□□ 0.32
ARHGEF1-222ENST00000600517 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF1-222ENST00000600517 IGHMBP2P38935 993 aaKnown RBP17.02■□□□□ 0.32
ARHGEF1-222ENST00000600517 LMBR1LQ6UX01 489 aa17.02■□□□□ 0.32
ARHGEF1-222ENST00000600517 HACL1Q9UJ83 578 aa17.02■□□□□ 0.32
ARHGEF1-222ENST00000600517 GGA1Q9UJY5 639 aa17.02■□□□□ 0.32
ARHGEF1-222ENST00000600517 UFL1O94874 794 aa17.01■□□□□ 0.31
ARHGEF1-222ENST00000600517 ATP2B4P23634 1241 aa17.01■□□□□ 0.31
ARHGEF1-222ENST00000600517 TNIP1Q15025 636 aa17.01■□□□□ 0.31
ARHGEF1-222ENST00000600517 KAZALD1Q96I82 304 aa17.01■□□□□ 0.31
ARHGEF1-222ENST00000600517 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
ARHGEF1-222ENST00000600517 USP44Q9H0E7 712 aa17.01■□□□□ 0.31
ARHGEF1-222ENST00000600517 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
ARHGEF1-222ENST00000600517 YDJCA8MPS7 323 aa17■□□□□ 0.31
ARHGEF1-222ENST00000600517 EPHX2P34913 555 aa17■□□□□ 0.31
ARHGEF1-222ENST00000600517 IFIT5Q13325 482 aaKnown RBP17■□□□□ 0.31
ARHGEF1-222ENST00000600517 CIAPIN1Q6FI81 312 aa17■□□□□ 0.31
ARHGEF1-222ENST00000600517 ARHGAP45Q92619 1136 aa17■□□□□ 0.31
ARHGEF1-222ENST00000600517 SUCLG2Q96I99 432 aa17■□□□□ 0.31
ARHGEF1-222ENST00000600517 GPR101Q96P66 508 aaPredicted RBP17■□□□□ 0.31
ARHGEF1-222ENST00000600517 MPHOSPH8Q99549 860 aa17■□□□□ 0.31
ARHGEF1-222ENST00000600517 RAD17O75943 681 aa16.99■□□□□ 0.31
ARHGEF1-222ENST00000600517 CCT4P50991 539 aaKnown RBP16.99■□□□□ 0.31
ARHGEF1-222ENST00000600517 SCNN1DP51172 638 aa16.99■□□□□ 0.31
ARHGEF1-222ENST00000600517 DOK7Q18PE1 504 aa16.99■□□□□ 0.31
ARHGEF1-222ENST00000600517 PNMA8AQ86V59 439 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF1-222ENST00000600517 ANKRD2Q9GZV1 360 aa16.99■□□□□ 0.31
ARHGEF1-222ENST00000600517 DBNDD1Q9H9R9 158 aa16.99■□□□□ 0.31
ARHGEF1-222ENST00000600517 CHMP3Q9Y3E7 222 aa16.99■□□□□ 0.31
ARHGEF1-222ENST00000600517 LTBP1Q14766 1721 aa16.99■□□□□ 0.31
ARHGEF1-222ENST00000600517 WTIPA6NIX2 430 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF1-222ENST00000600517 POTEIP0CG38 1075 aa16.98■□□□□ 0.31
ARHGEF1-222ENST00000600517 POTEJP0CG39 1038 aa16.98■□□□□ 0.31
ARHGEF1-222ENST00000600517 LMOD1P29536 600 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF1-222ENST00000600517 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
ARHGEF1-222ENST00000600517 CHADLQ6NUI6 762 aa16.98■□□□□ 0.31
ARHGEF1-222ENST00000600517 LEMD3Q9Y2U8 911 aa16.98■□□□□ 0.31
ARHGEF1-222ENST00000600517 KIF16BQ96L93 1317 aa16.97■□□□□ 0.31
ARHGEF1-222ENST00000600517 ECE2O60344 883 aa16.97■□□□□ 0.31
ARHGEF1-222ENST00000600517 EPS15P42566 896 aa16.97■□□□□ 0.31
ARHGEF1-222ENST00000600517 RABL6Q3YEC7 729 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF1-222ENST00000600517 LDHDQ86WU2 507 aa16.97■□□□□ 0.31
ARHGEF1-222ENST00000600517 GPRC5DQ9NZD1 345 aa16.97■□□□□ 0.31
ARHGEF1-222ENST00000600517 MYH3P11055 1940 aa16.97■□□□□ 0.31
ARHGEF1-222ENST00000600517 SCN4AP35499 1836 aa16.96■□□□□ 0.31
ARHGEF1-222ENST00000600517 IPO8O15397 1037 aaKnown RBP16.96■□□□□ 0.31
ARHGEF1-222ENST00000600517 BCAR3O75815 825 aa16.96■□□□□ 0.31
ARHGEF1-222ENST00000600517 GMPSP49915 693 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF1-222ENST00000600517 APLP1P51693 650 aa16.96■□□□□ 0.31
ARHGEF1-222ENST00000600517 KCNQ5Q9NR82 932 aa16.96■□□□□ 0.31
ARHGEF1-222ENST00000600517 G3V3G9 751 aa16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 CHRNDQ07001 517 aa16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 EAPPQ56P03 285 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 DCAF8Q5TAQ9 597 aa16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 LDHAL6AQ6ZMR3 332 aa16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 ANKRD44Q8N8A2 993 aa16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 DPF2Q92785 391 aa16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 ZNF594Q96JF6 807 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 BICC1Q9H694 974 aaKnown RBP16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 ZNF804BA4D1E1 1349 aa16.95■□□□□ 0.3
ARHGEF1-222ENST00000600517 MED23Q9ULK4 1368 aa16.94■□□□□ 0.3
ARHGEF1-222ENST00000600517 PSMD14O00487 310 aa16.94■□□□□ 0.3
ARHGEF1-222ENST00000600517 INTS3Q68E01 1043 aaKnown RBP16.94■□□□□ 0.3
ARHGEF1-222ENST00000600517 USP50Q70EL3 339 aaPredicted RBP16.94■□□□□ 0.3
ARHGEF1-222ENST00000600517 PODNQ7Z5L7 613 aa16.94■□□□□ 0.3
ARHGEF1-222ENST00000600517 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
ARHGEF1-222ENST00000600517 ADARB2Q9NS39 739 aaKnown RBP16.93■□□□□ 0.3
ARHGEF1-222ENST00000600517 CLEC11AQ9Y240 323 aa16.93■□□□□ 0.3
ARHGEF1-222ENST00000600517 TAF5LO75529 589 aa16.92■□□□□ 0.3
ARHGEF1-222ENST00000600517 VIL1P09327 827 aaKnown RBP16.92■□□□□ 0.3
ARHGEF1-222ENST00000600517 RPS12P25398 132 aaKnown RBP16.92■□□□□ 0.3
ARHGEF1-222ENST00000600517 ATF7IPQ6VMQ6 1270 aa16.92■□□□□ 0.3
ARHGEF1-222ENST00000600517 TXNRD3Q86VQ6 643 aa16.92■□□□□ 0.3
ARHGEF1-222ENST00000600517 HELBQ8NG08 1087 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF1-222ENST00000600517 CNNM1Q9NRU3 951 aa16.92■□□□□ 0.3
ARHGEF1-222ENST00000600517 CNOT7Q9UIV1 285 aaKnown RBP16.92■□□□□ 0.3
ARHGEF1-222ENST00000600517 ZBTB12Q9Y330 459 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF1-222ENST00000600517 ITGBL1O95965 494 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-222ENST00000600517 UBTFL1P0CB47 393 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-222ENST00000600517 TRIM27P14373 513 aa16.91■□□□□ 0.3
ARHGEF1-222ENST00000600517 KCNJ4P48050 445 aa16.91■□□□□ 0.3
ARHGEF1-222ENST00000600517 C15orf52Q6ZUT6 534 aaKnown RBP16.91■□□□□ 0.3
ARHGEF1-222ENST00000600517 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-222ENST00000600517 COA1Q9GZY4 146 aa16.91■□□□□ 0.3
ARHGEF1-222ENST00000600517 HDAC5Q9UQL6 1122 aa16.91■□□□□ 0.3
ARHGEF1-222ENST00000600517 CEP350Q5VT06 3117 aa16.9■□□□□ 0.3
ARHGEF1-222ENST00000600517 H7C1D1 291 aa16.9■□□□□ 0.3
ARHGEF1-222ENST00000600517 SNAP23O00161 211 aa16.9■□□□□ 0.3
ARHGEF1-222ENST00000600517 CNTROBQ8N137 903 aa16.9■□□□□ 0.3
ARHGEF1-222ENST00000600517 PUS3Q9BZE2 481 aaKnown RBP16.9■□□□□ 0.3
ARHGEF1-222ENST00000600517 RIPOR2Q9Y4F9 1068 aa16.9■□□□□ 0.3
ARHGEF1-222ENST00000600517 IRS2Q9Y4H2 1338 aa16.9■□□□□ 0.3
ARHGEF1-222ENST00000600517 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
ARHGEF1-222ENST00000600517 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
ARHGEF1-222ENST00000600517 KLRK1P26718 216 aa16.89■□□□□ 0.29
ARHGEF1-222ENST00000600517 ZKSCAN2Q63HK3 967 aa16.89■□□□□ 0.29
ARHGEF1-222ENST00000600517 RSBN1LQ6PCB5 846 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF1-222ENST00000600517 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
ARHGEF1-222ENST00000600517 DNAJC5GQ8N7S2 189 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms