RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 SUPT20HQ8NEM7 779 aa20.73■□□□□ 0.91
USHBP1-210ENST00000600286 NSFL1CQ9UNZ2 370 aaKnown RBP20.73■□□□□ 0.91
USHBP1-210ENST00000600286 EXOC6Q8TAG9 804 aa20.72■□□□□ 0.91
USHBP1-210ENST00000600286 SSH3Q8TE77 659 aa20.72■□□□□ 0.91
USHBP1-210ENST00000600286 COPRSQ9NQ92 184 aa20.72■□□□□ 0.91
USHBP1-210ENST00000600286 MINPP1Q9UNW1 487 aa20.72■□□□□ 0.91
USHBP1-210ENST00000600286 MYH3P11055 1940 aa20.72■□□□□ 0.91
USHBP1-210ENST00000600286 CCDC88AQ3V6T2 1871 aa20.71■□□□□ 0.91
USHBP1-210ENST00000600286 PNMA6EA0A0J9YXQ4 647 aa20.71■□□□□ 0.91
USHBP1-210ENST00000600286 EYA2O00167 538 aa20.71■□□□□ 0.91
USHBP1-210ENST00000600286 PTPN12Q05209 780 aaKnown RBP20.71■□□□□ 0.91
USHBP1-210ENST00000600286 OS9Q13438 667 aaPredicted RBP20.71■□□□□ 0.91
USHBP1-210ENST00000600286 HSP90AB4PQ58FF6 505 aa20.71■□□□□ 0.91
USHBP1-210ENST00000600286 GPBP1L1Q9HC44 474 aaPredicted RBP20.71■□□□□ 0.91
USHBP1-210ENST00000600286 MROH5Q6ZUA9 1318 aa20.71■□□□□ 0.91
USHBP1-210ENST00000600286 KIF3CO14782 793 aa20.7■□□□□ 0.9
USHBP1-210ENST00000600286 CIAO1O76071 339 aa20.7■□□□□ 0.9
USHBP1-210ENST00000600286 IL15P40933 162 aaPredicted RBP20.7■□□□□ 0.9
USHBP1-210ENST00000600286 KCNJ4P48050 445 aa20.7■□□□□ 0.9
USHBP1-210ENST00000600286 RFX5P48382 616 aaPredicted RBP20.7■□□□□ 0.9
USHBP1-210ENST00000600286 METTL24Q5JXM2 366 aa20.7■□□□□ 0.9
USHBP1-210ENST00000600286 SIL1Q9H173 461 aa20.7■□□□□ 0.9
USHBP1-210ENST00000600286 XDHP47989 1333 aa20.7■□□□□ 0.9
USHBP1-210ENST00000600286 C6orf229H3BNL8 230 aa20.69■□□□□ 0.9
USHBP1-210ENST00000600286 SURF6O75683 361 aaKnown RBP20.69■□□□□ 0.9
USHBP1-210ENST00000600286 ATP2B4P23634 1241 aa20.69■□□□□ 0.9
USHBP1-210ENST00000600286 FKBP4Q02790 459 aaKnown RBP eCLIP20.69■□□□□ 0.9
USHBP1-210ENST00000600286 POLA2Q14181 598 aa20.69■□□□□ 0.9
USHBP1-210ENST00000600286 KLHDC4Q8TBB5 520 aa20.69■□□□□ 0.9
USHBP1-210ENST00000600286 EYA3Q99504 573 aa20.69■□□□□ 0.9
USHBP1-210ENST00000600286 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
USHBP1-210ENST00000600286 CEP126Q9P2H0 1117 aa20.69■□□□□ 0.9
USHBP1-210ENST00000600286 GGA1Q9UJY5 639 aa20.69■□□□□ 0.9
USHBP1-210ENST00000600286 CHRNDQ07001 517 aa20.68■□□□□ 0.9
USHBP1-210ENST00000600286 PSMD1Q99460 953 aa20.68■□□□□ 0.9
USHBP1-210ENST00000600286 PODXL2Q9NZ53 605 aa20.68■□□□□ 0.9
USHBP1-210ENST00000600286 LEMD3Q9Y2U8 911 aa20.68■□□□□ 0.9
USHBP1-210ENST00000600286 FER1L6Q2WGJ9 1857 aa20.67■□□□□ 0.9
USHBP1-210ENST00000600286 GPSM2P81274 684 aa20.67■□□□□ 0.9
USHBP1-210ENST00000600286 ZNF526Q8TF50 670 aaPredicted RBP20.67■□□□□ 0.9
USHBP1-210ENST00000600286 PUS3Q9BZE2 481 aaKnown RBP20.67■□□□□ 0.9
USHBP1-210ENST00000600286 VPS33BQ9H267 617 aa20.67■□□□□ 0.9
USHBP1-210ENST00000600286 PA2G4Q9UQ80 394 aaKnown RBP20.67■□□□□ 0.9
USHBP1-210ENST00000600286 RIPOR2Q9Y4F9 1068 aa20.67■□□□□ 0.9
USHBP1-210ENST00000600286 SLX4Q8IY92 1834 aa20.67■□□□□ 0.9
USHBP1-210ENST00000600286 G3V3G9 751 aa20.66■□□□□ 0.9
USHBP1-210ENST00000600286 LRRC24Q50LG9 513 aa20.66■□□□□ 0.9
USHBP1-210ENST00000600286 DCAF8Q5TAQ9 597 aa20.66■□□□□ 0.9
USHBP1-210ENST00000600286 OLFM4Q6UX06 510 aa20.66■□□□□ 0.9
USHBP1-210ENST00000600286 ERC1Q8IUD2 1116 aa20.66■□□□□ 0.9
USHBP1-210ENST00000600286 ZC3H12CQ9C0D7 883 aaKnown RBP20.66■□□□□ 0.9
USHBP1-210ENST00000600286 RWDD1Q9H446 243 aaPredicted RBP20.66■□□□□ 0.9
USHBP1-210ENST00000600286 DICER1Q9UPY3 1922 aaKnown RBP20.65■□□□□ 0.9
USHBP1-210ENST00000600286 CACNA1SQ13698 1873 aa20.65■□□□□ 0.9
USHBP1-210ENST00000600286 LTBP3Q9NS15 1303 aa20.65■□□□□ 0.9
USHBP1-210ENST00000600286 UFL1O94874 794 aa20.65■□□□□ 0.9
USHBP1-210ENST00000600286 NOP58Q9Y2X3 529 aaKnown RBP20.65■□□□□ 0.9
USHBP1-210ENST00000600286 PRELPP51888 382 aa20.64■□□□□ 0.89
USHBP1-210ENST00000600286 WASHC4Q2M389 1173 aa20.64■□□□□ 0.89
USHBP1-210ENST00000600286 HELBQ8NG08 1087 aaPredicted RBP20.64■□□□□ 0.89
USHBP1-210ENST00000600286 TBC1D16Q8TBP0 767 aa20.64■□□□□ 0.89
USHBP1-210ENST00000600286 RTFDC1Q9BY42 306 aaPredicted RBP20.64■□□□□ 0.89
USHBP1-210ENST00000600286 AKAP2Q9Y2D5 859 aa20.64■□□□□ 0.89
USHBP1-210ENST00000600286 PCDHB15Q9Y5E8 787 aa20.64■□□□□ 0.89
USHBP1-210ENST00000600286 ZNF804BA4D1E1 1349 aa20.63■□□□□ 0.89
USHBP1-210ENST00000600286 RAB11FIP3O75154 756 aa20.63■□□□□ 0.89
USHBP1-210ENST00000600286 PDE8BO95263 885 aa20.63■□□□□ 0.89
USHBP1-210ENST00000600286 LMNB1P20700 586 aa20.63■□□□□ 0.89
USHBP1-210ENST00000600286 UBE4AQ14139 1066 aa20.63■□□□□ 0.89
USHBP1-210ENST00000600286 C9orf131Q5VYM1 1079 aa20.63■□□□□ 0.89
USHBP1-210ENST00000600286 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
USHBP1-210ENST00000600286 TIAM2Q8IVF5 1701 aa20.63■□□□□ 0.89
USHBP1-210ENST00000600286 NFKBIEO00221 500 aa20.62■□□□□ 0.89
USHBP1-210ENST00000600286 TAF5LO75529 589 aa20.62■□□□□ 0.89
USHBP1-210ENST00000600286 ATG9AQ7Z3C6 839 aa20.62■□□□□ 0.89
USHBP1-210ENST00000600286 SIRT2Q8IXJ6 389 aa20.62■□□□□ 0.89
USHBP1-210ENST00000600286 LARGE2Q8N3Y3 721 aa20.62■□□□□ 0.89
USHBP1-210ENST00000600286 JDP2Q8WYK2 163 aa20.62■□□□□ 0.89
USHBP1-210ENST00000600286 PPIP5K2O43314 1243 aa20.61■□□□□ 0.89
USHBP1-210ENST00000600286 IFIT1P09914 478 aaKnown RBP20.61■□□□□ 0.89
USHBP1-210ENST00000600286 IARSP41252 1262 aaKnown RBP20.61■□□□□ 0.89
USHBP1-210ENST00000600286 PUM3Q15397 648 aaKnown RBP20.61■□□□□ 0.89
USHBP1-210ENST00000600286 ZNF277Q9NRM2 450 aaPredicted RBP20.61■□□□□ 0.89
USHBP1-210ENST00000600286 POLLQ9UGP5 575 aa20.61■□□□□ 0.89
USHBP1-210ENST00000600286 SLC5A1P13866 664 aa20.6■□□□□ 0.89
USHBP1-210ENST00000600286 RASSF7Q02833 373 aa20.6■□□□□ 0.89
USHBP1-210ENST00000600286 EXOC6BQ9Y2D4 811 aa20.6■□□□□ 0.89
USHBP1-210ENST00000600286 TAF1P21675 1872 aa20.59■□□□□ 0.89
USHBP1-210ENST00000600286 RIMBP2O15034 1052 aa20.59■□□□□ 0.89
USHBP1-210ENST00000600286 TFCP2Q12800 502 aa20.59■□□□□ 0.89
USHBP1-210ENST00000600286 HDAC1Q13547 482 aaPredicted RBP20.59■□□□□ 0.89
USHBP1-210ENST00000600286 LPIN2Q92539 896 aa20.59■□□□□ 0.89
USHBP1-210ENST00000600286 KIF1BPQ96EK5 621 aa20.59■□□□□ 0.89
USHBP1-210ENST00000600286 KIAA2012Q0VF49 1180 aa20.58■□□□□ 0.89
USHBP1-210ENST00000600286 ATP2B3Q16720 1220 aa20.58■□□□□ 0.89
USHBP1-210ENST00000600286 CAVIN4Q5BKX8 364 aa20.58■□□□□ 0.89
USHBP1-210ENST00000600286 ERICH6BQ5W0A0 696 aa20.58■□□□□ 0.89
USHBP1-210ENST00000600286 VPS37DQ86XT2 251 aa20.58■□□□□ 0.89
USHBP1-210ENST00000600286 NIM1KQ8IY84 436 aa20.58■□□□□ 0.89
USHBP1-210ENST00000600286 GCC1Q96CN9 775 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms