RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 GNAI1P63096 354 aa22.25■■□□□ 1.15
SMG9-210ENST00000600097 DOK7Q18PE1 504 aa22.25■■□□□ 1.15
SMG9-210ENST00000600097 TBC1D10BQ4KMP7 808 aaPredicted RBP22.25■■□□□ 1.15
SMG9-210ENST00000600097 DCPSQ96C86 337 aaKnown RBP22.25■■□□□ 1.15
SMG9-210ENST00000600097 CCDC191Q8NCU4 936 aa22.24■■□□□ 1.15
SMG9-210ENST00000600097 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
SMG9-210ENST00000600097 RTL9Q8NET4 1388 aa22.24■■□□□ 1.15
SMG9-210ENST00000600097 PHAXQ9H814 394 aaKnown RBP22.23■■□□□ 1.15
SMG9-210ENST00000600097 KCNQ5Q9NR82 932 aa22.23■■□□□ 1.15
SMG9-210ENST00000600097 ANKIB1Q9P2G1 1089 aa22.23■■□□□ 1.15
SMG9-210ENST00000600097 G3V3G9 751 aa22.22■■□□□ 1.15
SMG9-210ENST00000600097 EGFRP00533 1210 aa22.22■■□□□ 1.15
SMG9-210ENST00000600097 PCCAP05165 728 aaPredicted RBP22.22■■□□□ 1.15
SMG9-210ENST00000600097 VIL1P09327 827 aaKnown RBP22.22■■□□□ 1.15
SMG9-210ENST00000600097 CCDC152Q4G0S7 254 aa22.22■■□□□ 1.15
SMG9-210ENST00000600097 RBM26Q5T8P6 1007 aaKnown RBP22.22■■□□□ 1.15
SMG9-210ENST00000600097 DCAF8Q5TAQ9 597 aa22.22■■□□□ 1.15
SMG9-210ENST00000600097 C2orf69Q8N8R5 385 aa22.22■■□□□ 1.15
SMG9-210ENST00000600097 MYD88Q99836 296 aa22.22■■□□□ 1.15
SMG9-210ENST00000600097 GBA2Q9HCG7 927 aaPredicted RBP22.22■■□□□ 1.15
SMG9-210ENST00000600097 CCDC85CA6NKD9 419 aa22.21■■□□□ 1.15
SMG9-210ENST00000600097 PDE8AO60658 829 aa22.21■■□□□ 1.15
SMG9-210ENST00000600097 UFL1O94874 794 aa22.21■■□□□ 1.15
SMG9-210ENST00000600097 KIF4BQ2VIQ3 1234 aa22.21■■□□□ 1.15
SMG9-210ENST00000600097 PRKRIP1Q9H875 184 aaPredicted RBP22.21■■□□□ 1.15
SMG9-210ENST00000600097 SEC31BQ9NQW1 1179 aa22.21■■□□□ 1.15
SMG9-210ENST00000600097 GGA1Q9UJY5 639 aa22.21■■□□□ 1.15
SMG9-210ENST00000600097 COL4A1P02462 1669 aa22.2■■□□□ 1.15
SMG9-210ENST00000600097 ELL2O00472 640 aaPredicted RBP22.2■■□□□ 1.14
SMG9-210ENST00000600097 APAF1O14727 1248 aa22.2■■□□□ 1.14
SMG9-210ENST00000600097 DDX58O95786 925 aaKnown RBP22.2■■□□□ 1.14
SMG9-210ENST00000600097 RGMBQ6NW40 437 aa22.2■■□□□ 1.14
SMG9-210ENST00000600097 DLK2Q6UY11 383 aa22.2■■□□□ 1.14
SMG9-210ENST00000600097 CWC25Q9NXE8 425 aaPredicted RBP22.2■■□□□ 1.14
SMG9-210ENST00000600097 SULF1Q8IWU6 871 aa22.19■■□□□ 1.14
SMG9-210ENST00000600097 CCDC102AQ96A19 550 aa22.19■■□□□ 1.14
SMG9-210ENST00000600097 ADM5C9JUS6 153 aa22.18■■□□□ 1.14
SMG9-210ENST00000600097 FAM161AQ3B820 660 aa22.18■■□□□ 1.14
SMG9-210ENST00000600097 CCDC30Q5VVM6 783 aa22.18■■□□□ 1.14
SMG9-210ENST00000600097 AGBL3Q8NEM8 1001 aa22.18■■□□□ 1.14
SMG9-210ENST00000600097 METTL22Q9BUU2 404 aaPredicted RBP22.18■■□□□ 1.14
SMG9-210ENST00000600097 ANKRD18AQ8IVF6 992 aa22.17■■□□□ 1.14
SMG9-210ENST00000600097 ZIC5Q96T25 663 aa22.17■■□□□ 1.14
SMG9-210ENST00000600097 MCOLN1Q9GZU1 580 aa22.17■■□□□ 1.14
SMG9-210ENST00000600097 GGA3Q9NZ52 723 aa22.17■■□□□ 1.14
SMG9-210ENST00000600097 ZNF609O15014 1411 aa22.16■■□□□ 1.14
SMG9-210ENST00000600097 XDHP47989 1333 aa22.16■■□□□ 1.14
SMG9-210ENST00000600097 FAM155AB1AL88 458 aaPredicted RBP22.16■■□□□ 1.14
SMG9-210ENST00000600097 RGS19P49795 217 aa22.16■■□□□ 1.14
SMG9-210ENST00000600097 RSBN1LQ6PCB5 846 aaPredicted RBP22.16■■□□□ 1.14
SMG9-210ENST00000600097 C8orf58Q8NAV2 365 aa22.16■■□□□ 1.14
SMG9-210ENST00000600097 ZNF157P51786 506 aaPredicted RBP22.15■■□□□ 1.14
SMG9-210ENST00000600097 ZNF280AP59817 542 aaPredicted RBP22.15■■□□□ 1.14
SMG9-210ENST00000600097 MLLT1Q03111 559 aaPredicted RBP22.15■■□□□ 1.14
SMG9-210ENST00000600097 SAGE1Q9NXZ1 904 aa22.15■■□□□ 1.14
SMG9-210ENST00000600097 ATP2B4P23634 1241 aa22.14■■□□□ 1.13
SMG9-210ENST00000600097 PODNQ7Z5L7 613 aa22.14■■□□□ 1.13
SMG9-210ENST00000600097 CCDC85AQ96PX6 553 aaPredicted RBP22.14■■□□□ 1.13
SMG9-210ENST00000600097 CDC5LQ99459 802 aaKnown RBP22.14■■□□□ 1.13
SMG9-210ENST00000600097 KIF23Q02241 960 aaPredicted RBP22.13■■□□□ 1.13
SMG9-210ENST00000600097 DGKZQ13574 1117 aa22.13■■□□□ 1.13
SMG9-210ENST00000600097 JARID2Q92833 1246 aaPredicted RBP22.13■■□□□ 1.13
SMG9-210ENST00000600097 MAP3K2Q9Y2U5 619 aa22.13■■□□□ 1.13
SMG9-210ENST00000600097 SCN9AQ15858 1988 aa22.12■■□□□ 1.13
SMG9-210ENST00000600097 SCARF1Q14162 830 aa22.12■■□□□ 1.13
SMG9-210ENST00000600097 KSR2Q6VAB6 950 aa22.12■■□□□ 1.13
SMG9-210ENST00000600097 CDCA5Q96FF9 252 aa22.12■■□□□ 1.13
SMG9-210ENST00000600097 ASTN2O75129 1339 aaPredicted RBP22.11■■□□□ 1.13
SMG9-210ENST00000600097 CASP8AP2Q9UKL3 1982 aa22.11■■□□□ 1.13
SMG9-210ENST00000600097 USP17L3A6NCW0 530 aa22.11■■□□□ 1.13
SMG9-210ENST00000600097 USP17L4A6NCW7 530 aa22.11■■□□□ 1.13
SMG9-210ENST00000600097 USP17L8P0C7I0 530 aa22.11■■□□□ 1.13
SMG9-210ENST00000600097 CTSWP56202 376 aa22.11■■□□□ 1.13
SMG9-210ENST00000600097 ANGEL2Q5VTE6 544 aaKnown RBP22.11■■□□□ 1.13
SMG9-210ENST00000600097 USP17L1Q7RTZ2 530 aa22.11■■□□□ 1.13
SMG9-210ENST00000600097 GMLQ99445 158 aa22.11■■□□□ 1.13
SMG9-210ENST00000600097 POLR2AP24928 1970 aaKnown RBP22.1■■□□□ 1.13
SMG9-210ENST00000600097 PI4KAP2A4QPH2 592 aa22.1■■□□□ 1.13
SMG9-210ENST00000600097 SLC10A3P09131 477 aa22.1■■□□□ 1.13
SMG9-210ENST00000600097 FKBP1BP68106 108 aa22.1■■□□□ 1.13
SMG9-210ENST00000600097 NEXNQ0ZGT2 675 aa22.1■■□□□ 1.13
SMG9-210ENST00000600097 PI4KAP1Q8N8J0 262 aa22.1■■□□□ 1.13
SMG9-210ENST00000600097 STK31Q9BXU1 1019 aa22.1■■□□□ 1.13
SMG9-210ENST00000600097 MYOZ2Q9NPC6 264 aa22.1■■□□□ 1.13
SMG9-210ENST00000600097 PITPNM2Q9BZ72 1349 aa22.09■■□□□ 1.13
SMG9-210ENST00000600097 REM2Q8IYK8 340 aaPredicted RBP22.09■■□□□ 1.13
SMG9-210ENST00000600097 TTLL11Q8NHH1 800 aa22.09■■□□□ 1.13
SMG9-210ENST00000600097 BSDC1Q9NW68 430 aaPredicted RBP22.09■■□□□ 1.13
SMG9-210ENST00000600097 IGKV5-2P06315 115 aa22.08■■□□□ 1.13
SMG9-210ENST00000600097 TSPYL6Q8N831 410 aa22.08■■□□□ 1.13
SMG9-210ENST00000600097 RNF186Q9NXI6 227 aa22.08■■□□□ 1.13
SMG9-210ENST00000600097 MED23Q9ULK4 1368 aa22.08■■□□□ 1.12
SMG9-210ENST00000600097 TRPA1O75762 1119 aa22.07■■□□□ 1.12
SMG9-210ENST00000600097 CSRNP1Q96S65 589 aa22.07■■□□□ 1.12
SMG9-210ENST00000600097 MINPP1Q9UNW1 487 aa22.07■■□□□ 1.12
SMG9-210ENST00000600097 GREM2Q9H772 168 aa22.06■■□□□ 1.12
SMG9-210ENST00000600097 CCT4P50991 539 aaKnown RBP22.05■■□□□ 1.12
SMG9-210ENST00000600097 OGFOD1Q8N543 542 aa22.05■■□□□ 1.12
SMG9-210ENST00000600097 MYO3BQ8WXR4 1341 aa22.05■■□□□ 1.12
SMG9-210ENST00000600097 PSME4Q14997 1843 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms