RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 FRAT1Q92837 279 aaPredicted RBP35.52■■■■□ 3.28
SSBP4-206ENST00000599699 ZNRF3Q9ULT6 936 aa35.52■■■■□ 3.28
SSBP4-206ENST00000599699 UTYO14607 1347 aa35.52■■■■□ 3.28
SSBP4-206ENST00000599699 DUOX1Q9NRD9 1551 aa35.51■■■■□ 3.28
SSBP4-206ENST00000599699 IPO8O15397 1037 aaKnown RBP35.51■■■■□ 3.28
SSBP4-206ENST00000599699 MINPP1Q9UNW1 487 aa35.51■■■■□ 3.28
SSBP4-206ENST00000599699 XDHP47989 1333 aa35.51■■■■□ 3.27
SSBP4-206ENST00000599699 CCDC57Q2TAC2 916 aa35.5■■■■□ 3.27
SSBP4-206ENST00000599699 GPC2Q8N158 579 aa35.5■■■■□ 3.27
SSBP4-206ENST00000599699 ARHGAP45Q92619 1136 aa35.5■■■■□ 3.27
SSBP4-206ENST00000599699 GPR101Q96P66 508 aaPredicted RBP35.5■■■■□ 3.27
SSBP4-206ENST00000599699 POTECB2RU33 542 aa35.49■■■■□ 3.27
SSBP4-206ENST00000599699 TAF7LQ5H9L4 462 aa35.49■■■■□ 3.27
SSBP4-206ENST00000599699 USP44Q9H0E7 712 aa35.49■■■■□ 3.27
SSBP4-206ENST00000599699 WDR90Q96KV7 1748 aa35.49■■■■□ 3.27
SSBP4-206ENST00000599699 L3MBTL3Q96JM7 780 aaPredicted RBP35.48■■■■□ 3.27
SSBP4-206ENST00000599699 ZC3H12CQ9C0D7 883 aaKnown RBP35.48■■■■□ 3.27
SSBP4-206ENST00000599699 IQCA1LA6NCM1 817 aa35.47■■■■□ 3.27
SSBP4-206ENST00000599699 ATP2B4P23634 1241 aa35.46■■■■□ 3.27
SSBP4-206ENST00000599699 KAZALD1Q96I82 304 aa35.46■■■■□ 3.27
SSBP4-206ENST00000599699 BICC1Q9H694 974 aaKnown RBP35.46■■■■□ 3.27
SSBP4-206ENST00000599699 G3V3G9 751 aa35.45■■■■□ 3.27
SSBP4-206ENST00000599699 DCAF8Q5TAQ9 597 aa35.45■■■■□ 3.27
SSBP4-206ENST00000599699 RBM46Q8TBY0 533 aaKnown RBP35.45■■■■□ 3.27
SSBP4-206ENST00000599699 SPEF2Q9C093 1822 aa35.45■■■■□ 3.27
SSBP4-206ENST00000599699 DOK7Q18PE1 504 aa35.44■■■■□ 3.26
SSBP4-206ENST00000599699 DBNDD1Q9H9R9 158 aa35.44■■■■□ 3.26
SSBP4-206ENST00000599699 LTBP1Q14766 1721 aa35.43■■■■□ 3.26
SSBP4-206ENST00000599699 RAD17O75943 681 aa35.43■■■■□ 3.26
SSBP4-206ENST00000599699 CXCL9Q07325 125 aa35.43■■■■□ 3.26
SSBP4-206ENST00000599699 ANKRD2Q9GZV1 360 aa35.43■■■■□ 3.26
SSBP4-206ENST00000599699 ATF7IPQ6VMQ6 1270 aa35.42■■■■□ 3.26
SSBP4-206ENST00000599699 ZNF594Q96JF6 807 aaPredicted RBP35.42■■■■□ 3.26
SSBP4-206ENST00000599699 HACL1Q9UJ83 578 aa35.42■■■■□ 3.26
SSBP4-206ENST00000599699 TRIM27P14373 513 aa35.41■■■■□ 3.26
SSBP4-206ENST00000599699 CIAPIN1Q6FI81 312 aa35.41■■■■□ 3.26
SSBP4-206ENST00000599699 ECE2O60344 883 aa35.4■■■■□ 3.26
SSBP4-206ENST00000599699 UBTFL1P0CB47 393 aaPredicted RBP35.4■■■■□ 3.26
SSBP4-206ENST00000599699 TNIP1Q15025 636 aa35.4■■■■□ 3.26
SSBP4-206ENST00000599699 YDJCA8MPS7 323 aa35.39■■■■□ 3.26
SSBP4-206ENST00000599699 LMOD1P29536 600 aaPredicted RBP35.39■■■■□ 3.26
SSBP4-206ENST00000599699 CHRNDQ07001 517 aa35.39■■■■□ 3.26
SSBP4-206ENST00000599699 ZKSCAN2Q63HK3 967 aa35.39■■■■□ 3.26
SSBP4-206ENST00000599699 LDHAL6AQ6ZMR3 332 aa35.39■■■■□ 3.26
SSBP4-206ENST00000599699 ANKRD44Q8N8A2 993 aa35.39■■■■□ 3.26
SSBP4-206ENST00000599699 TAF1DQ9H5J8 278 aaPredicted RBP35.39■■■■□ 3.26
SSBP4-206ENST00000599699 CNNM1Q9NRU3 951 aa35.39■■■■□ 3.26
SSBP4-206ENST00000599699 KCNJ4P48050 445 aa35.38■■■■□ 3.25
SSBP4-206ENST00000599699 RABL6Q3YEC7 729 aaPredicted RBP35.38■■■■□ 3.25
SSBP4-206ENST00000599699 CLUAP1Q96AJ1 413 aa35.38■■■■□ 3.25
SSBP4-206ENST00000599699 LEMD3Q9Y2U8 911 aa35.38■■■■□ 3.25
SSBP4-206ENST00000599699 WTIPA6NIX2 430 aaPredicted RBP35.37■■■■□ 3.25
SSBP4-206ENST00000599699 INTS3Q68E01 1043 aaKnown RBP35.37■■■■□ 3.25
SSBP4-206ENST00000599699 SMC1BQ8NDV3 1235 aa35.37■■■■□ 3.25
SSBP4-206ENST00000599699 TNNQ9UQP3 1299 aa35.37■■■■□ 3.25
SSBP4-206ENST00000599699 EPHX2P34913 555 aa35.36■■■■□ 3.25
SSBP4-206ENST00000599699 FSTL1Q12841 308 aa35.35■■■■□ 3.25
SSBP4-206ENST00000599699 EAPPQ56P03 285 aaPredicted RBP35.35■■■■□ 3.25
SSBP4-206ENST00000599699 HELBQ8NG08 1087 aaPredicted RBP35.35■■■■□ 3.25
SSBP4-206ENST00000599699 HDAC5Q9UQL6 1122 aa35.35■■■■□ 3.25
SSBP4-206ENST00000599699 ZNF804BA4D1E1 1349 aa35.34■■■■□ 3.25
SSBP4-206ENST00000599699 PLIN1O60240 522 aa35.33■■■■□ 3.25
SSBP4-206ENST00000599699 TAF5LO75529 589 aa35.33■■■■□ 3.25
SSBP4-206ENST00000599699 GMPSP49915 693 aaPredicted RBP35.33■■■■□ 3.25
SSBP4-206ENST00000599699 SCNN1DP51172 638 aa35.33■■■■□ 3.25
SSBP4-206ENST00000599699 SCN4AP35499 1836 aa35.33■■■■□ 3.25
SSBP4-206ENST00000599699 MEIS3Q99687 375 aa35.32■■■■□ 3.24
SSBP4-206ENST00000599699 MED23Q9ULK4 1368 aa35.32■■■■□ 3.24
SSBP4-206ENST00000599699 PSMD14O00487 310 aa35.31■■■■□ 3.24
SSBP4-206ENST00000599699 POTEIP0CG38 1075 aa35.31■■■■□ 3.24
SSBP4-206ENST00000599699 POTEJP0CG39 1038 aa35.31■■■■□ 3.24
SSBP4-206ENST00000599699 EPS15P42566 896 aa35.31■■■■□ 3.24
SSBP4-206ENST00000599699 KCNQ5Q9NR82 932 aa35.31■■■■□ 3.24
SSBP4-206ENST00000599699 PNMA8AQ86V59 439 aaPredicted RBP35.3■■■■□ 3.24
SSBP4-206ENST00000599699 FTSJ3Q8IY81 847 aaKnown RBP35.3■■■■□ 3.24
SSBP4-206ENST00000599699 CLEC11AQ9Y240 323 aa35.3■■■■□ 3.24
SSBP4-206ENST00000599699 LRRFIP2Q9Y608 721 aaKnown RBP35.3■■■■□ 3.24
SSBP4-206ENST00000599699 GNAI3P08754 354 aa35.29■■■■□ 3.24
SSBP4-206ENST00000599699 HSPA6P17066 643 aa35.29■■■■□ 3.24
SSBP4-206ENST00000599699 PUS3Q9BZE2 481 aaKnown RBP35.29■■■■□ 3.24
SSBP4-206ENST00000599699 GPRC5DQ9NZD1 345 aa35.29■■■■□ 3.24
SSBP4-206ENST00000599699 LDHDQ86WU2 507 aa35.28■■■■□ 3.24
SSBP4-206ENST00000599699 SNAP23O00161 211 aa35.27■■■■□ 3.24
SSBP4-206ENST00000599699 CHADLQ6NUI6 762 aa35.27■■■■□ 3.24
SSBP4-206ENST00000599699 ZBTB12Q9Y330 459 aaPredicted RBP35.27■■■■□ 3.24
SSBP4-206ENST00000599699 PODNQ7Z5L7 613 aa35.26■■■■□ 3.24
SSBP4-206ENST00000599699 TXNRD3Q86VQ6 643 aa35.26■■■■□ 3.24
SSBP4-206ENST00000599699 TMEM57Q8N5G2 664 aa35.26■■■■□ 3.24
SSBP4-206ENST00000599699 KLRK1P26718 216 aa35.25■■■■□ 3.23
SSBP4-206ENST00000599699 KLHDC4Q8TBB5 520 aa35.25■■■■□ 3.23
SSBP4-206ENST00000599699 COA1Q9GZY4 146 aa35.25■■■■□ 3.23
SSBP4-206ENST00000599699 DZIP1LQ8IYY4 767 aaKnown RBP35.24■■■■□ 3.23
SSBP4-206ENST00000599699 ADARB2Q9NS39 739 aaKnown RBP35.23■■■■□ 3.23
SSBP4-206ENST00000599699 CNOT7Q9UIV1 285 aaKnown RBP35.23■■■■□ 3.23
SSBP4-206ENST00000599699 RIPOR2Q9Y4F9 1068 aa35.23■■■■□ 3.23
SSBP4-206ENST00000599699 MROH5Q6ZUA9 1318 aa35.23■■■■□ 3.23
SSBP4-206ENST00000599699 LRRC24Q50LG9 513 aa35.22■■■■□ 3.23
SSBP4-206ENST00000599699 FBXW7Q969H0 707 aa35.22■■■■□ 3.23
SSBP4-206ENST00000599699 H7C1D1 291 aa35.21■■■■□ 3.23
SSBP4-206ENST00000599699 VIL1P09327 827 aaKnown RBP35.21■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms