RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 ZNF428Q96B54 188 aa12.35□□□□□ -0.43
LINC00649-210ENST00000599421 TRMT112Q9UI30 125 aaKnown RBP12.35□□□□□ -0.43
LINC00649-210ENST00000599421 HPS5Q9UPZ3 1129 aa12.35□□□□□ -0.43
LINC00649-210ENST00000599421 PAPPA2Q9BXP8 1791 aa12.35□□□□□ -0.43
LINC00649-210ENST00000599421 RTL9Q8NET4 1388 aa12.34□□□□□ -0.43
LINC00649-210ENST00000599421 TMPOP42166 694 aaKnown RBP12.34□□□□□ -0.43
LINC00649-210ENST00000599421 RIPK4P57078 832 aa12.34□□□□□ -0.43
LINC00649-210ENST00000599421 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
LINC00649-210ENST00000599421 RBM26Q5T8P6 1007 aaKnown RBP12.34□□□□□ -0.43
LINC00649-210ENST00000599421 SULF1Q8IWU6 871 aa12.34□□□□□ -0.43
LINC00649-210ENST00000599421 CCDC146Q8IYE0 955 aa12.34□□□□□ -0.43
LINC00649-210ENST00000599421 GGA3Q9NZ52 723 aa12.34□□□□□ -0.43
LINC00649-210ENST00000599421 NSFL1CQ9UNZ2 370 aaKnown RBP12.34□□□□□ -0.43
LINC00649-210ENST00000599421 ECE2O60344 883 aa12.33□□□□□ -0.44
LINC00649-210ENST00000599421 TCIRG1Q13488 830 aa12.33□□□□□ -0.44
LINC00649-210ENST00000599421 PKN2Q16513 984 aaKnown RBP12.33□□□□□ -0.44
LINC00649-210ENST00000599421 COPS6Q7L5N1 327 aa12.33□□□□□ -0.44
LINC00649-210ENST00000599421 RASAL3Q86YV0 1011 aa12.33□□□□□ -0.44
LINC00649-210ENST00000599421 CDCA5Q96FF9 252 aa12.33□□□□□ -0.44
LINC00649-210ENST00000599421 POLLQ9UGP5 575 aa12.33□□□□□ -0.44
LINC00649-210ENST00000599421 ADAMTS8Q9UP79 889 aa12.33□□□□□ -0.44
LINC00649-210ENST00000599421 SPEF2Q9C093 1822 aa12.32□□□□□ -0.44
LINC00649-210ENST00000599421 CENPFP49454 3210 aa12.32□□□□□ -0.44
LINC00649-210ENST00000599421 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
LINC00649-210ENST00000599421 RIMBP2O15034 1052 aa12.32□□□□□ -0.44
LINC00649-210ENST00000599421 XAGE3Q8WTP9 111 aa12.32□□□□□ -0.44
LINC00649-210ENST00000599421 CELF1Q92879 486 aaKnown RBP12.32□□□□□ -0.44
LINC00649-210ENST00000599421 EYA3Q99504 573 aa12.32□□□□□ -0.44
LINC00649-210ENST00000599421 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
LINC00649-210ENST00000599421 CEP290O15078 2479 aa12.32□□□□□ -0.44
LINC00649-210ENST00000599421 ASTN2O75129 1339 aaPredicted RBP12.32□□□□□ -0.44
LINC00649-210ENST00000599421 HTTP42858 3142 aa12.31□□□□□ -0.44
LINC00649-210ENST00000599421 ZNF609O15014 1411 aa12.31□□□□□ -0.44
LINC00649-210ENST00000599421 VIL1P09327 827 aaKnown RBP12.31□□□□□ -0.44
LINC00649-210ENST00000599421 FKBP1BP68106 108 aa12.31□□□□□ -0.44
LINC00649-210ENST00000599421 GPSM2P81274 684 aa12.31□□□□□ -0.44
LINC00649-210ENST00000599421 AIMP1Q12904 312 aaKnown RBP12.31□□□□□ -0.44
LINC00649-210ENST00000599421 SF3B3Q15393 1217 aaKnown RBP12.31□□□□□ -0.44
LINC00649-210ENST00000599421 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
LINC00649-210ENST00000599421 PNNQ9H307 717 aaKnown RBP12.31□□□□□ -0.44
LINC00649-210ENST00000599421 HDAC9Q9UKV0 1011 aa12.31□□□□□ -0.44
LINC00649-210ENST00000599421 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
LINC00649-210ENST00000599421 ZNF296Q8WUU4 475 aaPredicted RBP12.3□□□□□ -0.44
LINC00649-210ENST00000599421 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
LINC00649-210ENST00000599421 CHPF2Q9P2E5 772 aa12.3□□□□□ -0.44
LINC00649-210ENST00000599421 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
LINC00649-210ENST00000599421 BRCA2P51587 3418 aa12.3□□□□□ -0.44
LINC00649-210ENST00000599421 ZBED9Q6R2W3 1325 aa12.3□□□□□ -0.44
LINC00649-210ENST00000599421 ZNF280AP59817 542 aaPredicted RBP12.29□□□□□ -0.44
LINC00649-210ENST00000599421 ANGEL2Q5VTE6 544 aaKnown RBP12.29□□□□□ -0.44
LINC00649-210ENST00000599421 TBC1D16Q8TBP0 767 aa12.29□□□□□ -0.44
LINC00649-210ENST00000599421 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
LINC00649-210ENST00000599421 ZNF646O15015 1829 aaPredicted RBP12.29□□□□□ -0.44
LINC00649-210ENST00000599421 CHL1O00533 1208 aa12.28□□□□□ -0.44
LINC00649-210ENST00000599421 SCARF1Q14162 830 aa12.28□□□□□ -0.44
LINC00649-210ENST00000599421 NOM1Q5C9Z4 860 aaKnown RBP12.28□□□□□ -0.44
LINC00649-210ENST00000599421 AGBL3Q8NEM8 1001 aa12.28□□□□□ -0.44
LINC00649-210ENST00000599421 FAM89AQ96GI7 184 aa12.28□□□□□ -0.44
LINC00649-210ENST00000599421 ZC3H12CQ9C0D7 883 aaKnown RBP12.28□□□□□ -0.44
LINC00649-210ENST00000599421 PODXL2Q9NZ53 605 aa12.28□□□□□ -0.44
LINC00649-210ENST00000599421 MYH3P11055 1940 aa12.28□□□□□ -0.44
LINC00649-210ENST00000599421 PITPNM2Q9BZ72 1349 aa12.28□□□□□ -0.44
LINC00649-210ENST00000599421 TBC1D8O95759 1140 aa12.27□□□□□ -0.45
LINC00649-210ENST00000599421 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.45
LINC00649-210ENST00000599421 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
LINC00649-210ENST00000599421 RSBN1LQ6PCB5 846 aaPredicted RBP12.27□□□□□ -0.45
LINC00649-210ENST00000599421 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.45
LINC00649-210ENST00000599421 PLBD2Q8NHP8 589 aa12.27□□□□□ -0.45
LINC00649-210ENST00000599421 ISCA1Q9BUE6 129 aa12.27□□□□□ -0.45
LINC00649-210ENST00000599421 LAS1LQ9Y4W2 734 aaKnown RBP12.27□□□□□ -0.45
LINC00649-210ENST00000599421 G3V3G9 751 aa12.26□□□□□ -0.45
LINC00649-210ENST00000599421 GPR25O00155 361 aa12.26□□□□□ -0.45
LINC00649-210ENST00000599421 TM4SF4P48230 202 aa12.26□□□□□ -0.45
LINC00649-210ENST00000599421 DCAF8Q5TAQ9 597 aa12.26□□□□□ -0.45
LINC00649-210ENST00000599421 MOB2Q70IA6 237 aa12.26□□□□□ -0.45
LINC00649-210ENST00000599421 RUNDC1Q96C34 613 aa12.26□□□□□ -0.45
LINC00649-210ENST00000599421 MYOZ2Q9NPC6 264 aa12.26□□□□□ -0.45
LINC00649-210ENST00000599421 TRIOBPQ9H2D6 2365 aa12.26□□□□□ -0.45
LINC00649-210ENST00000599421 ATP5J2-PTCD1G3V325 749 aa12.25□□□□□ -0.45
LINC00649-210ENST00000599421 UFL1O94874 794 aa12.25□□□□□ -0.45
LINC00649-210ENST00000599421 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
LINC00649-210ENST00000599421 GMLQ99445 158 aa12.25□□□□□ -0.45
LINC00649-210ENST00000599421 GGA1Q9UJY5 639 aa12.25□□□□□ -0.45
LINC00649-210ENST00000599421 RBBP6Q7Z6E9 1792 aaKnown RBP12.25□□□□□ -0.45
LINC00649-210ENST00000599421 UBE2Q2LH0YL09 131 aa12.24□□□□□ -0.45
LINC00649-210ENST00000599421 IRS4O14654 1257 aaPredicted RBP12.24□□□□□ -0.45
LINC00649-210ENST00000599421 USP17L8P0C7I0 530 aa12.24□□□□□ -0.45
LINC00649-210ENST00000599421 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
LINC00649-210ENST00000599421 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
LINC00649-210ENST00000599421 CFHR5Q9BXR6 569 aa12.24□□□□□ -0.45
LINC00649-210ENST00000599421 ANKIB1Q9P2G1 1089 aa12.24□□□□□ -0.45
LINC00649-210ENST00000599421 FKTNO75072 461 aa12.23□□□□□ -0.45
LINC00649-210ENST00000599421 SREBF2Q12772 1141 aa12.23□□□□□ -0.45
LINC00649-210ENST00000599421 TRIM28Q13263 835 aaKnown RBP12.23□□□□□ -0.45
LINC00649-210ENST00000599421 HABP4Q5JVS0 413 aaKnown RBP12.23□□□□□ -0.45
LINC00649-210ENST00000599421 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
LINC00649-210ENST00000599421 SCAF8Q9UPN6 1271 aaKnown RBP12.23□□□□□ -0.45
LINC00649-210ENST00000599421 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
LINC00649-210ENST00000599421 LAMB1P07942 1786 aa12.23□□□□□ -0.45
LINC00649-210ENST00000599421 USP17L3A6NCW0 530 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms