RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 SHTN1A0MZ66 631 aa15.48■□□□□ 0.07
LIG1-217ENST00000599165 RIMBP2O15034 1052 aa15.48■□□□□ 0.07
LIG1-217ENST00000599165 RAD17O75943 681 aa15.48■□□□□ 0.07
LIG1-217ENST00000599165 WASHC4Q2M389 1173 aa15.48■□□□□ 0.07
LIG1-217ENST00000599165 EAPPQ56P03 285 aaPredicted RBP15.48■□□□□ 0.07
LIG1-217ENST00000599165 ANKRD18AQ8IVF6 992 aa15.48■□□□□ 0.07
LIG1-217ENST00000599165 DBNDD1Q9H9R9 158 aa15.48■□□□□ 0.07
LIG1-217ENST00000599165 GPRC5DQ9NZD1 345 aa15.48■□□□□ 0.07
LIG1-217ENST00000599165 C6orf229H3BNL8 230 aa15.47■□□□□ 0.07
LIG1-217ENST00000599165 GMPSP49915 693 aaPredicted RBP15.47■□□□□ 0.07
LIG1-217ENST00000599165 DOK7Q18PE1 504 aa15.47■□□□□ 0.07
LIG1-217ENST00000599165 CIAPIN1Q6FI81 312 aa15.47■□□□□ 0.07
LIG1-217ENST00000599165 KAZALD1Q96I82 304 aa15.47■□□□□ 0.07
LIG1-217ENST00000599165 BSDC1Q9NW68 430 aaPredicted RBP15.47■□□□□ 0.07
LIG1-217ENST00000599165 MINPP1Q9UNW1 487 aa15.47■□□□□ 0.07
LIG1-217ENST00000599165 UFL1O94874 794 aa15.46■□□□□ 0.07
LIG1-217ENST00000599165 ITGA6P23229 1130 aa15.46■□□□□ 0.07
LIG1-217ENST00000599165 MAP1SQ66K74 1059 aaPredicted RBP15.46■□□□□ 0.07
LIG1-217ENST00000599165 CDC5LQ99459 802 aaKnown RBP15.46■□□□□ 0.07
LIG1-217ENST00000599165 BCL2L13Q9BXK5 485 aa15.46■□□□□ 0.07
LIG1-217ENST00000599165 XDHP47989 1333 aa15.45■□□□□ 0.06
LIG1-217ENST00000599165 GRM8O00222 908 aa15.45■□□□□ 0.06
LIG1-217ENST00000599165 PSMD14O00487 310 aa15.45■□□□□ 0.06
LIG1-217ENST00000599165 ECE2O60344 883 aa15.45■□□□□ 0.06
LIG1-217ENST00000599165 ALDH1L1O75891 902 aa15.45■□□□□ 0.06
LIG1-217ENST00000599165 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
LIG1-217ENST00000599165 PNMA8AQ86V59 439 aaPredicted RBP15.45■□□□□ 0.06
LIG1-217ENST00000599165 KLRG1Q96E93 195 aa15.45■□□□□ 0.06
LIG1-217ENST00000599165 ANKIB1Q9P2G1 1089 aa15.45■□□□□ 0.06
LIG1-217ENST00000599165 GGA1Q9UJY5 639 aa15.45■□□□□ 0.06
LIG1-217ENST00000599165 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
LIG1-217ENST00000599165 UTYO14607 1347 aa15.44■□□□□ 0.06
LIG1-217ENST00000599165 HIRAP54198 1017 aaPredicted RBP15.44■□□□□ 0.06
LIG1-217ENST00000599165 FMR1Q06787 632 aaKnown RBP eCLIP15.44■□□□□ 0.06
LIG1-217ENST00000599165 TRPM7Q96QT4 1865 aa15.44■□□□□ 0.06
LIG1-217ENST00000599165 POLR2AP24928 1970 aaKnown RBP15.44■□□□□ 0.06
LIG1-217ENST00000599165 IRS2Q9Y4H2 1338 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 PCNTO95613 3336 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 NBPF7P0C2Y1 421 aaPredicted RBP15.43■□□□□ 0.06
LIG1-217ENST00000599165 KLRK1P26718 216 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 LMOD1P29536 600 aaPredicted RBP15.43■□□□□ 0.06
LIG1-217ENST00000599165 SLC4A10Q6U841 1118 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 USP50Q70EL3 339 aaPredicted RBP15.43■□□□□ 0.06
LIG1-217ENST00000599165 TXNRD3Q86VQ6 643 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 CNTROBQ8N137 903 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 TRPM4Q8TD43 1214 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 SUCLG2Q96I99 432 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 EYA3Q99504 573 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 SRCIN1Q9C0H9 1055 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 ZNF609O15014 1411 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 PTPRCP08575 1304 aa15.43■□□□□ 0.06
LIG1-217ENST00000599165 MED23Q9ULK4 1368 aa15.42■□□□□ 0.06
LIG1-217ENST00000599165 EGFRP00533 1210 aa15.42■□□□□ 0.06
LIG1-217ENST00000599165 ATP2B4P23634 1241 aa15.42■□□□□ 0.06
LIG1-217ENST00000599165 TNIP1Q15025 636 aa15.42■□□□□ 0.06
LIG1-217ENST00000599165 ALDH1L2Q3SY69 923 aa15.42■□□□□ 0.06
LIG1-217ENST00000599165 LMBR1LQ6UX01 489 aa15.42■□□□□ 0.06
LIG1-217ENST00000599165 JMYQ8N9B5 988 aa15.42■□□□□ 0.06
LIG1-217ENST00000599165 ZC3H12CQ9C0D7 883 aaKnown RBP15.42■□□□□ 0.06
LIG1-217ENST00000599165 ADARB2Q9NS39 739 aaKnown RBP15.42■□□□□ 0.06
LIG1-217ENST00000599165 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
LIG1-217ENST00000599165 VIL1P09327 827 aaKnown RBP15.41■□□□□ 0.06
LIG1-217ENST00000599165 CCT4P50991 539 aaKnown RBP15.41■□□□□ 0.06
LIG1-217ENST00000599165 CREBZFQ9NS37 354 aa15.41■□□□□ 0.06
LIG1-217ENST00000599165 PGAP2Q9UHJ9 254 aa15.41■□□□□ 0.06
LIG1-217ENST00000599165 CNOT7Q9UIV1 285 aaKnown RBP15.41■□□□□ 0.06
LIG1-217ENST00000599165 SNAP23O00161 211 aa15.4■□□□□ 0.06
LIG1-217ENST00000599165 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
LIG1-217ENST00000599165 CHRNDQ07001 517 aa15.4■□□□□ 0.06
LIG1-217ENST00000599165 MICALL2Q8IY33 904 aa15.4■□□□□ 0.06
LIG1-217ENST00000599165 DPF2Q92785 391 aa15.4■□□□□ 0.06
LIG1-217ENST00000599165 ZNF594Q96JF6 807 aaPredicted RBP15.4■□□□□ 0.06
LIG1-217ENST00000599165 ANKRD18BA2A2Z9 1011 aa15.39■□□□□ 0.05
LIG1-217ENST00000599165 TRAF5O00463 557 aa15.39■□□□□ 0.05
LIG1-217ENST00000599165 BRPF1P55201 1214 aaPredicted RBP15.39■□□□□ 0.05
LIG1-217ENST00000599165 RABL6Q3YEC7 729 aaPredicted RBP15.39■□□□□ 0.05
LIG1-217ENST00000599165 SAMD7Q7Z3H4 446 aa15.39■□□□□ 0.05
LIG1-217ENST00000599165 ANKRD44Q8N8A2 993 aa15.39■□□□□ 0.05
LIG1-217ENST00000599165 GMLQ99445 158 aa15.39■□□□□ 0.05
LIG1-217ENST00000599165 USP44Q9H0E7 712 aa15.39■□□□□ 0.05
LIG1-217ENST00000599165 SMC4Q9NTJ3 1288 aa15.39■□□□□ 0.05
LIG1-217ENST00000599165 C9orf78Q9NZ63 289 aaPredicted RBP15.39■□□□□ 0.05
LIG1-217ENST00000599165 CT47B1P0C2W7 299 aaPredicted RBP15.38■□□□□ 0.05
LIG1-217ENST00000599165 IFIT5Q13325 482 aaKnown RBP15.38■□□□□ 0.05
LIG1-217ENST00000599165 LEMD3Q9Y2U8 911 aa15.38■□□□□ 0.05
LIG1-217ENST00000599165 ZNF804BA4D1E1 1349 aa15.38■□□□□ 0.05
LIG1-217ENST00000599165 TAF5LO75529 589 aa15.37■□□□□ 0.05
LIG1-217ENST00000599165 RPS12P25398 132 aaKnown RBP15.37■□□□□ 0.05
LIG1-217ENST00000599165 RARSP54136 660 aaKnown RBP15.37■□□□□ 0.05
LIG1-217ENST00000599165 HELBQ8NG08 1087 aaPredicted RBP15.37■□□□□ 0.05
LIG1-217ENST00000599165 MPHOSPH8Q99549 860 aa15.37■□□□□ 0.05
LIG1-217ENST00000599165 BICC1Q9H694 974 aaKnown RBP15.37■□□□□ 0.05
LIG1-217ENST00000599165 CNTNAP1P78357 1384 aa15.36■□□□□ 0.05
LIG1-217ENST00000599165 TMEM88BA6NKF7 163 aa15.36■□□□□ 0.05
LIG1-217ENST00000599165 TBC1D10BQ4KMP7 808 aaPredicted RBP15.36■□□□□ 0.05
LIG1-217ENST00000599165 CST9Q5W186 159 aa15.36■□□□□ 0.05
LIG1-217ENST00000599165 RSBN1LQ6PCB5 846 aaPredicted RBP15.36■□□□□ 0.05
LIG1-217ENST00000599165 DLK2Q6UY11 383 aa15.36■□□□□ 0.05
LIG1-217ENST00000599165 PODNQ7Z5L7 613 aa15.36■□□□□ 0.05
LIG1-217ENST00000599165 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms