RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 LRRC2Q9BYS8 371 aa23.28■■□□□ 1.32
GRAMD1A-207ENST00000598118 GPR108Q9NPR9 543 aa23.28■■□□□ 1.32
GRAMD1A-207ENST00000598118 USP25Q9UHP3 1055 aa23.28■■□□□ 1.32
GRAMD1A-207ENST00000598118 EYA2O00167 538 aa23.28■■□□□ 1.32
GRAMD1A-207ENST00000598118 SOS2Q07890 1332 aaPredicted RBP23.27■■□□□ 1.32
GRAMD1A-207ENST00000598118 PDIA4P13667 645 aaKnown RBP23.27■■□□□ 1.32
GRAMD1A-207ENST00000598118 CARD10Q9BWT7 1032 aa23.26■■□□□ 1.31
GRAMD1A-207ENST00000598118 STRN4Q9NRL3 753 aa23.26■■□□□ 1.31
GRAMD1A-207ENST00000598118 TNS2Q63HR2 1409 aa23.26■■□□□ 1.31
GRAMD1A-207ENST00000598118 A0A0G2JLW4 131 aa23.26■■□□□ 1.31
GRAMD1A-207ENST00000598118 TFIP11Q9UBB9 837 aaKnown RBP23.25■■□□□ 1.31
GRAMD1A-207ENST00000598118 TOGARAM1Q9Y4F4 1720 aa23.25■■□□□ 1.31
GRAMD1A-207ENST00000598118 A0A1B0GUL7 405 aa23.25■■□□□ 1.31
GRAMD1A-207ENST00000598118 ELP1O95163 1332 aa23.24■■□□□ 1.31
GRAMD1A-207ENST00000598118 LIG1P18858 919 aa23.24■■□□□ 1.31
GRAMD1A-207ENST00000598118 ZMYM1Q5SVZ6 1142 aa23.24■■□□□ 1.31
GRAMD1A-207ENST00000598118 BRF1Q92994 677 aa23.24■■□□□ 1.31
GRAMD1A-207ENST00000598118 HELLSQ9NRZ9 838 aa23.24■■□□□ 1.31
GRAMD1A-207ENST00000598118 ABCA3Q99758 1704 aa23.24■■□□□ 1.31
GRAMD1A-207ENST00000598118 MCM5P33992 734 aa23.24■■□□□ 1.31
GRAMD1A-207ENST00000598118 MPNDQ8N594 471 aa23.24■■□□□ 1.31
GRAMD1A-207ENST00000598118 HSP90B1P14625 803 aaKnown RBP23.23■■□□□ 1.31
GRAMD1A-207ENST00000598118 SCRN1Q12765 414 aa23.23■■□□□ 1.31
GRAMD1A-207ENST00000598118 ISCA1Q9BUE6 129 aa23.23■■□□□ 1.31
GRAMD1A-207ENST00000598118 ADCY5O95622 1261 aa23.22■■□□□ 1.31
GRAMD1A-207ENST00000598118 PTMAP06454 111 aaKnown RBP23.22■■□□□ 1.31
GRAMD1A-207ENST00000598118 IFIT1P09914 478 aaKnown RBP23.22■■□□□ 1.31
GRAMD1A-207ENST00000598118 SLAIN2Q9P270 581 aa23.22■■□□□ 1.31
GRAMD1A-207ENST00000598118 ZNF330Q9Y3S2 320 aaPredicted RBP23.22■■□□□ 1.31
GRAMD1A-207ENST00000598118 CIAO1O76071 339 aa23.22■■□□□ 1.31
GRAMD1A-207ENST00000598118 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.22■■□□□ 1.31
GRAMD1A-207ENST00000598118 DSCC1Q9BVC3 393 aa23.22■■□□□ 1.31
GRAMD1A-207ENST00000598118 ATG3Q9NT62 314 aa23.22■■□□□ 1.31
GRAMD1A-207ENST00000598118 HSPD1P10809 573 aaKnown RBP23.21■■□□□ 1.31
GRAMD1A-207ENST00000598118 DDX11Q96FC9 970 aa23.21■■□□□ 1.31
GRAMD1A-207ENST00000598118 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.21■■□□□ 1.316e-8■■□□□ 11.9
GRAMD1A-207ENST00000598118 MAST3O60307 1309 aa23.21■■□□□ 1.31
GRAMD1A-207ENST00000598118 TCIRG1Q13488 830 aa23.21■■□□□ 1.31
GRAMD1A-207ENST00000598118 DHX32Q7L7V1 743 aaKnown RBP23.2■■□□□ 1.3
GRAMD1A-207ENST00000598118 LEO1Q8WVC0 666 aaPredicted RBP23.2■■□□□ 1.3
GRAMD1A-207ENST00000598118 SPATA32Q96LK8 384 aa23.2■■□□□ 1.3
GRAMD1A-207ENST00000598118 KDM4AO75164 1064 aa23.2■■□□□ 1.3
GRAMD1A-207ENST00000598118 CCDC85AQ96PX6 553 aaPredicted RBP23.2■■□□□ 1.3
GRAMD1A-207ENST00000598118 SCAND2PQ9GZW5 306 aaPredicted RBP23.2■■□□□ 1.3
GRAMD1A-207ENST00000598118 RNF113AO15541 343 aaKnown RBP23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 AP5Z1O43299 807 aa23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 RESTQ13127 1097 aa23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 CAMK4Q16566 473 aa23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 M0R2C6 588 aa23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 ADORA1P30542 326 aa23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 EXOSC10Q01780 885 aaKnown RBP23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 KLHL34Q8N239 644 aa23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 CEP126Q9P2H0 1117 aa23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 ASAP1Q9ULH1 1129 aa23.19■■□□□ 1.3
GRAMD1A-207ENST00000598118 PFKFB2O60825 505 aa23.18■■□□□ 1.3
GRAMD1A-207ENST00000598118 EVA1CP58658 441 aa23.18■■□□□ 1.3
GRAMD1A-207ENST00000598118 FGD1P98174 961 aa23.18■■□□□ 1.3
GRAMD1A-207ENST00000598118 APOBRQ0VD83 1088 aa23.18■■□□□ 1.3
GRAMD1A-207ENST00000598118 SMARCC2Q8TAQ2 1214 aa23.18■■□□□ 1.3
GRAMD1A-207ENST00000598118 FAM89AQ96GI7 184 aa23.18■■□□□ 1.3
GRAMD1A-207ENST00000598118 ZNF830Q96NB3 372 aaPredicted RBP23.18■■□□□ 1.3
GRAMD1A-207ENST00000598118 TMOD3Q9NYL9 352 aa23.18■■□□□ 1.3
GRAMD1A-207ENST00000598118 SPEF2Q9C093 1822 aa23.18■■□□□ 1.3
GRAMD1A-207ENST00000598118 E7EWF7 191 aa23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 CTDNEP1O95476 244 aa23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 HMGB1P09429 215 aaKnown RBP23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 CCDC57Q2TAC2 916 aa23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 DNAJC10Q8IXB1 793 aa23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 OSBP2Q969R2 916 aa23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 TTLL5Q6EMB2 1281 aa23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 PGBD1Q96JS3 809 aa23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 NUP62CLQ9H1M0 184 aa23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 DACT1Q9NYF0 836 aa23.17■■□□□ 1.3
GRAMD1A-207ENST00000598118 FKBP4Q02790 459 aaKnown RBP eCLIP23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 NSUN7Q8NE18 718 aaKnown RBP23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 AGXT2Q9BYV1 514 aa23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 R3HCC1Q9Y3T6 440 aaKnown RBP23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 CCDC192P0DO97 292 aa23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 CHST3Q7LGC8 479 aa23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 SYNE4Q8N205 404 aa23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 PIGBQ92521 554 aa23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 XAGE2Q96GT9 111 aa23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 KAT6BQ8WYB5 2073 aa23.16■■□□□ 1.3
GRAMD1A-207ENST00000598118 TPM2P07951 284 aa23.15■■□□□ 1.3
GRAMD1A-207ENST00000598118 TICAM2Q86XR7 235 aa23.15■■□□□ 1.3
GRAMD1A-207ENST00000598118 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.15■■□□□ 1.3
GRAMD1A-207ENST00000598118 MYH15Q9Y2K3 1946 aa23.15■■□□□ 1.3
GRAMD1A-207ENST00000598118 NWD2Q9ULI1 1742 aa23.15■■□□□ 1.3
GRAMD1A-207ENST00000598118 H3BQV1 296 aa23.15■■□□□ 1.3
GRAMD1A-207ENST00000598118 SCARF1Q14162 830 aa23.15■■□□□ 1.3
GRAMD1A-207ENST00000598118 MAP3K11Q16584 847 aa23.15■■□□□ 1.3
GRAMD1A-207ENST00000598118 IFFO2Q5TF58 517 aa23.15■■□□□ 1.3
GRAMD1A-207ENST00000598118 ZNF335Q9H4Z2 1342 aaPredicted RBP23.14■■□□□ 1.3
GRAMD1A-207ENST00000598118 FOXP2O15409 715 aa23.14■■□□□ 1.29
GRAMD1A-207ENST00000598118 CCT2P78371 535 aaKnown RBP23.14■■□□□ 1.29
GRAMD1A-207ENST00000598118 PLCB2Q00722 1185 aa23.14■■□□□ 1.29
GRAMD1A-207ENST00000598118 TRIM28Q13263 835 aaKnown RBP23.14■■□□□ 1.29
GRAMD1A-207ENST00000598118 LLPHQ9BRT6 129 aaKnown RBP23.14■■□□□ 1.29
GRAMD1A-207ENST00000598118 STRCQ7RTU9 1775 aa23.14■■□□□ 1.29
GRAMD1A-207ENST00000598118 GOLGA6L4A6NEF3 574 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms