RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 POLA2Q14181 598 aa27.5■■□□□ 1.99
CHMP2A-204ENST00000597848 GRIPAP1Q4V328 841 aa27.5■■□□□ 1.99
CHMP2A-204ENST00000597848 DPP8Q6V1X1 898 aaPredicted RBP27.5■■□□□ 1.99
CHMP2A-204ENST00000597848 SSH3Q8TE77 659 aa27.5■■□□□ 1.99
CHMP2A-204ENST00000597848 HMMRO75330 724 aa27.49■■□□□ 1.99
CHMP2A-204ENST00000597848 GPSM2P81274 684 aa27.49■■□□□ 1.99
CHMP2A-204ENST00000597848 AAMPQ13685 434 aa27.49■■□□□ 1.99
CHMP2A-204ENST00000597848 LRRC24Q50LG9 513 aa27.49■■□□□ 1.99
CHMP2A-204ENST00000597848 COPRSQ9NQ92 184 aa27.49■■□□□ 1.99
CHMP2A-204ENST00000597848 EYA2O00167 538 aa27.48■■□□□ 1.99
CHMP2A-204ENST00000597848 CHRNDQ07001 517 aa27.48■■□□□ 1.99
CHMP2A-204ENST00000597848 ANKRD2Q9GZV1 360 aa27.48■■□□□ 1.99
CHMP2A-204ENST00000597848 HELBQ8NG08 1087 aaPredicted RBP27.47■■□□□ 1.99
CHMP2A-204ENST00000597848 ARFGEF1Q9Y6D6 1849 aa27.46■■□□□ 1.99
CHMP2A-204ENST00000597848 NEFLP07196 543 aa27.46■■□□□ 1.99
CHMP2A-204ENST00000597848 SIRT2Q8IXJ6 389 aa27.46■■□□□ 1.99
CHMP2A-204ENST00000597848 TAOK3Q9H2K8 898 aa27.46■■□□□ 1.99
CHMP2A-204ENST00000597848 FBXO3Q9UK99 471 aa27.46■■□□□ 1.99
CHMP2A-204ENST00000597848 RIPOR2Q9Y4F9 1068 aa27.46■■□□□ 1.99
CHMP2A-204ENST00000597848 PCDHB15Q9Y5E8 787 aa27.46■■□□□ 1.99
CHMP2A-204ENST00000597848 XDHP47989 1333 aa27.45■■□□□ 1.99
CHMP2A-204ENST00000597848 C6orf229H3BNL8 230 aa27.45■■□□□ 1.98
CHMP2A-204ENST00000597848 SURF6O75683 361 aaKnown RBP27.45■■□□□ 1.98
CHMP2A-204ENST00000597848 FKBP4Q02790 459 aaKnown RBP eCLIP27.45■■□□□ 1.98
CHMP2A-204ENST00000597848 G3BP1Q13283 466 aaKnown RBP eCLIP27.45■■□□□ 1.98
CHMP2A-204ENST00000597848 METTL24Q5JXM2 366 aa27.45■■□□□ 1.98
CHMP2A-204ENST00000597848 MROH5Q6ZUA9 1318 aa27.44■■□□□ 1.98
CHMP2A-204ENST00000597848 NFKBIEO00221 500 aa27.44■■□□□ 1.98
CHMP2A-204ENST00000597848 TAF5LO75529 589 aa27.44■■□□□ 1.98
CHMP2A-204ENST00000597848 CIAO1O76071 339 aa27.44■■□□□ 1.98
CHMP2A-204ENST00000597848 RASSF7Q02833 373 aa27.44■■□□□ 1.98
CHMP2A-204ENST00000597848 GGA1Q9UJY5 639 aa27.44■■□□□ 1.98
CHMP2A-204ENST00000597848 SPEF2Q9C093 1822 aa27.44■■□□□ 1.98
CHMP2A-204ENST00000597848 UFL1O94874 794 aa27.43■■□□□ 1.98
CHMP2A-204ENST00000597848 IL15P40933 162 aaPredicted RBP27.43■■□□□ 1.98
CHMP2A-204ENST00000597848 OS9Q13438 667 aaPredicted RBP27.43■■□□□ 1.98
CHMP2A-204ENST00000597848 ATG9AQ7Z3C6 839 aa27.43■■□□□ 1.98
CHMP2A-204ENST00000597848 SUPT20HQ8NEM7 779 aa27.43■■□□□ 1.98
CHMP2A-204ENST00000597848 PSMD1Q99460 953 aa27.43■■□□□ 1.98
CHMP2A-204ENST00000597848 PODXL2Q9NZ53 605 aa27.43■■□□□ 1.98
CHMP2A-204ENST00000597848 ATP2B4P23634 1241 aa27.42■■□□□ 1.98
CHMP2A-204ENST00000597848 KCNJ4P48050 445 aa27.42■■□□□ 1.98
CHMP2A-204ENST00000597848 TBC1D16Q8TBP0 767 aa27.42■■□□□ 1.98
CHMP2A-204ENST00000597848 POLLQ9UGP5 575 aa27.42■■□□□ 1.98
CHMP2A-204ENST00000597848 ZNF277Q9NRM2 450 aaPredicted RBP27.41■■□□□ 1.98
CHMP2A-204ENST00000597848 CEP126Q9P2H0 1117 aa27.41■■□□□ 1.98
CHMP2A-204ENST00000597848 RTFDC1Q9BY42 306 aaPredicted RBP27.4■■□□□ 1.98
CHMP2A-204ENST00000597848 LEMD3Q9Y2U8 911 aa27.4■■□□□ 1.98
CHMP2A-204ENST00000597848 NOP58Q9Y2X3 529 aaKnown RBP27.4■■□□□ 1.98
CHMP2A-204ENST00000597848 LTBP3Q9NS15 1303 aa27.4■■□□□ 1.98
CHMP2A-204ENST00000597848 LRRC37AA6NMS7 1700 aa27.39■■□□□ 1.98
CHMP2A-204ENST00000597848 EYA3Q99504 573 aa27.39■■□□□ 1.98
CHMP2A-204ENST00000597848 EXOC6BQ9Y2D4 811 aa27.39■■□□□ 1.98
CHMP2A-204ENST00000597848 SNED1Q8TER0 1413 aa27.39■■□□□ 1.97
CHMP2A-204ENST00000597848 WTIPA6NIX2 430 aaPredicted RBP27.38■■□□□ 1.97
CHMP2A-204ENST00000597848 GPR101Q96P66 508 aaPredicted RBP27.38■■□□□ 1.97
CHMP2A-204ENST00000597848 ZNF804BA4D1E1 1349 aa27.38■■□□□ 1.97
CHMP2A-204ENST00000597848 SNAP23O00161 211 aa27.37■■□□□ 1.97
CHMP2A-204ENST00000597848 RIMBP2O15034 1052 aa27.37■■□□□ 1.97
CHMP2A-204ENST00000597848 PDE8BO95263 885 aa27.37■■□□□ 1.97
CHMP2A-204ENST00000597848 LMNB1P20700 586 aa27.37■■□□□ 1.97
CHMP2A-204ENST00000597848 WASHC4Q2M389 1173 aa27.37■■□□□ 1.97
CHMP2A-204ENST00000597848 HSP90AB4PQ58FF6 505 aa27.37■■□□□ 1.97
CHMP2A-204ENST00000597848 PPIP5K2O43314 1243 aa27.36■■□□□ 1.97
CHMP2A-204ENST00000597848 IARSP41252 1262 aaKnown RBP27.36■■□□□ 1.97
CHMP2A-204ENST00000597848 TFCP2Q12800 502 aa27.36■■□□□ 1.97
CHMP2A-204ENST00000597848 ZC3H12CQ9C0D7 883 aaKnown RBP27.36■■□□□ 1.97
CHMP2A-204ENST00000597848 LARGE2Q8N3Y3 721 aa27.35■■□□□ 1.97
CHMP2A-204ENST00000597848 VGLL2Q8N8G2 317 aa27.35■■□□□ 1.97
CHMP2A-204ENST00000597848 FER1L6Q2WGJ9 1857 aa27.35■■□□□ 1.97
CHMP2A-204ENST00000597848 APBB1O00213 710 aa27.34■■□□□ 1.97
CHMP2A-204ENST00000597848 PRELPP51888 382 aa27.34■■□□□ 1.97
CHMP2A-204ENST00000597848 UBE4AQ14139 1066 aa27.34■■□□□ 1.97
CHMP2A-204ENST00000597848 AOC3Q16853 763 aa27.34■■□□□ 1.97
CHMP2A-204ENST00000597848 VPS33BQ9H267 617 aa27.34■■□□□ 1.97
CHMP2A-204ENST00000597848 RNF181Q9P0P0 153 aa27.34■■□□□ 1.97
CHMP2A-204ENST00000597848 G3V3G9 751 aa27.33■■□□□ 1.97
CHMP2A-204ENST00000597848 SASH1O94885 1247 aa27.33■■□□□ 1.97
CHMP2A-204ENST00000597848 PUM3Q15397 648 aaKnown RBP27.33■■□□□ 1.97
CHMP2A-204ENST00000597848 DCAF8Q5TAQ9 597 aa27.33■■□□□ 1.97
CHMP2A-204ENST00000597848 C9orf131Q5VYM1 1079 aa27.33■■□□□ 1.97
CHMP2A-204ENST00000597848 ERC1Q8IUD2 1116 aa27.33■■□□□ 1.97
CHMP2A-204ENST00000597848 RWDD1Q9H446 243 aaPredicted RBP27.33■■□□□ 1.97
CHMP2A-204ENST00000597848 KIAA2012Q0VF49 1180 aa27.32■■□□□ 1.96
CHMP2A-204ENST00000597848 DUOX1Q9NRD9 1551 aa27.31■■□□□ 1.96
CHMP2A-204ENST00000597848 HDAC1Q13547 482 aaPredicted RBP27.31■■□□□ 1.96
CHMP2A-204ENST00000597848 ATP2B3Q16720 1220 aa27.31■■□□□ 1.96
CHMP2A-204ENST00000597848 JDP2Q8WYK2 163 aa27.31■■□□□ 1.96
CHMP2A-204ENST00000597848 DCTPP1Q9H773 170 aa27.31■■□□□ 1.96
CHMP2A-204ENST00000597848 AKAP2Q9Y2D5 859 aa27.31■■□□□ 1.96
CHMP2A-204ENST00000597848 RAB11FIP3O75154 756 aa27.3■■□□□ 1.96
CHMP2A-204ENST00000597848 IFIT1P09914 478 aaKnown RBP27.3■■□□□ 1.96
CHMP2A-204ENST00000597848 SLC5A1P13866 664 aa27.3■■□□□ 1.96
CHMP2A-204ENST00000597848 KLRK1P26718 216 aa27.3■■□□□ 1.96
CHMP2A-204ENST00000597848 DOK7Q18PE1 504 aa27.29■■□□□ 1.96
CHMP2A-204ENST00000597848 NIM1KQ8IY84 436 aa27.29■■□□□ 1.96
CHMP2A-204ENST00000597848 LPIN2Q92539 896 aa27.29■■□□□ 1.96
CHMP2A-204ENST00000597848 BCL11AQ9H165 835 aa27.29■■□□□ 1.96
CHMP2A-204ENST00000597848 LTBP1Q14766 1721 aa27.29■■□□□ 1.96
CHMP2A-204ENST00000597848 MED23Q9ULK4 1368 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms