RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
LIG1-211ENST00000596457 NMRK2Q9NPI5 230 aa13.94□□□□□ -0.18
LIG1-211ENST00000596457 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
LIG1-211ENST00000596457 RIMBP2O15034 1052 aa13.93□□□□□ -0.18
LIG1-211ENST00000596457 PPIP5K2O43314 1243 aa13.93□□□□□ -0.18
LIG1-211ENST00000596457 UBTFL1P0CB47 393 aaPredicted RBP13.93□□□□□ -0.18
LIG1-211ENST00000596457 FSTL1Q12841 308 aa13.93□□□□□ -0.18
LIG1-211ENST00000596457 AOC3Q16853 763 aa13.93□□□□□ -0.18
LIG1-211ENST00000596457 CCDC57Q2TAC2 916 aa13.93□□□□□ -0.18
LIG1-211ENST00000596457 FTSJ3Q8IY81 847 aaKnown RBP13.93□□□□□ -0.18
LIG1-211ENST00000596457 LARGE2Q8N3Y3 721 aa13.93□□□□□ -0.18
LIG1-211ENST00000596457 ZNF594Q96JF6 807 aaPredicted RBP13.93□□□□□ -0.18
LIG1-211ENST00000596457 RRAGCQ9HB90 399 aa13.93□□□□□ -0.18
LIG1-211ENST00000596457 RCAN3Q9UKA8 241 aa13.93□□□□□ -0.18
LIG1-211ENST00000596457 LRRC37AA6NMS7 1700 aa13.93□□□□□ -0.18
LIG1-211ENST00000596457 UTYO14607 1347 aa13.92□□□□□ -0.18
LIG1-211ENST00000596457 VEGFAP15692 232 aaPredicted RBP13.92□□□□□ -0.18
LIG1-211ENST00000596457 INTS3Q68E01 1043 aaKnown RBP13.92□□□□□ -0.18
LIG1-211ENST00000596457 TMEM57Q8N5G2 664 aa13.92□□□□□ -0.18
LIG1-211ENST00000596457 JDP2Q8WYK2 163 aa13.92□□□□□ -0.18
LIG1-211ENST00000596457 KAZALD1Q96I82 304 aa13.92□□□□□ -0.18
LIG1-211ENST00000596457 GPR101Q96P66 508 aaPredicted RBP13.92□□□□□ -0.18
LIG1-211ENST00000596457 SNED1Q8TER0 1413 aa13.91□□□□□ -0.18
LIG1-211ENST00000596457 PLIN1O60240 522 aa13.91□□□□□ -0.18
LIG1-211ENST00000596457 DZIP1LQ8IYY4 767 aaKnown RBP13.91□□□□□ -0.18
LIG1-211ENST00000596457 MEIS3Q99687 375 aa13.91□□□□□ -0.18
LIG1-211ENST00000596457 BSDC1Q9NW68 430 aaPredicted RBP13.91□□□□□ -0.18
LIG1-211ENST00000596457 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
LIG1-211ENST00000596457 G3V3G9 751 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 UFL1O94874 794 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 WASHC4Q2M389 1173 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 ITPRIPQ8IWB1 547 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 NIM1KQ8IY84 436 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 ANKRD44Q8N8A2 993 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 CNNM1Q9NRU3 951 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 POLLQ9UGP5 575 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 GGA1Q9UJY5 639 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 MINPP1Q9UNW1 487 aa13.9□□□□□ -0.18
LIG1-211ENST00000596457 LRRFIP2Q9Y608 721 aaKnown RBP13.9□□□□□ -0.18
LIG1-211ENST00000596457 GNAI3P08754 354 aa13.89□□□□□ -0.19
LIG1-211ENST00000596457 LDHAL6AQ6ZMR3 332 aa13.89□□□□□ -0.19
LIG1-211ENST00000596457 HELBQ8NG08 1087 aaPredicted RBP13.89□□□□□ -0.19
LIG1-211ENST00000596457 TBC1D16Q8TBP0 767 aa13.89□□□□□ -0.19
LIG1-211ENST00000596457 PANK1Q8TE04 598 aa13.89□□□□□ -0.19
LIG1-211ENST00000596457 EYA3Q99504 573 aa13.89□□□□□ -0.19
LIG1-211ENST00000596457 RTFDC1Q9BY42 306 aaPredicted RBP13.89□□□□□ -0.19
LIG1-211ENST00000596457 XDHP47989 1333 aa13.89□□□□□ -0.19
LIG1-211ENST00000596457 WTIPA6NIX2 430 aaPredicted RBP13.88□□□□□ -0.19
LIG1-211ENST00000596457 DDNO94850 711 aaPredicted RBP13.88□□□□□ -0.19
LIG1-211ENST00000596457 RLBP1P12271 317 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 ATP2B4P23634 1241 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 EIF6P56537 245 aaKnown RBP13.88□□□□□ -0.19
LIG1-211ENST00000596457 DOK7Q18PE1 504 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 SMC1BQ8NDV3 1235 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 ZC3H12CQ9C0D7 883 aaKnown RBP13.88□□□□□ -0.19
LIG1-211ENST00000596457 HDAC5Q9UQL6 1122 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 GJA3Q9Y6H8 435 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 COL4A5P29400 1685 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 ZNF541Q9H0D2 1346 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 DUOX1Q9NRD9 1551 aa13.88□□□□□ -0.19
LIG1-211ENST00000596457 TAF5LO75529 589 aa13.87□□□□□ -0.19
LIG1-211ENST00000596457 KCNJ4P48050 445 aa13.87□□□□□ -0.19
LIG1-211ENST00000596457 CHRNDQ07001 517 aa13.87□□□□□ -0.19
LIG1-211ENST00000596457 KIAA2012Q0VF49 1180 aa13.87□□□□□ -0.19
LIG1-211ENST00000596457 RABL6Q3YEC7 729 aaPredicted RBP13.87□□□□□ -0.19
LIG1-211ENST00000596457 PUS3Q9BZE2 481 aaKnown RBP13.87□□□□□ -0.19
LIG1-211ENST00000596457 ANKRD2Q9GZV1 360 aa13.87□□□□□ -0.19
LIG1-211ENST00000596457 VPS33BQ9H267 617 aa13.87□□□□□ -0.19
LIG1-211ENST00000596457 DBNDD1Q9H9R9 158 aa13.87□□□□□ -0.19
LIG1-211ENST00000596457 PODXL2Q9NZ53 605 aa13.87□□□□□ -0.19
LIG1-211ENST00000596457 LTBP1Q14766 1721 aa13.87□□□□□ -0.19
LIG1-211ENST00000596457 FZD9O00144 591 aa13.86□□□□□ -0.19
LIG1-211ENST00000596457 MS4A1P11836 297 aa13.86□□□□□ -0.19
LIG1-211ENST00000596457 SNAP23O00161 211 aa13.85□□□□□ -0.19
LIG1-211ENST00000596457 RAD17O75943 681 aa13.85□□□□□ -0.19
LIG1-211ENST00000596457 GNAI2P04899 355 aa13.85□□□□□ -0.19
LIG1-211ENST00000596457 LRRC24Q50LG9 513 aa13.85□□□□□ -0.19
LIG1-211ENST00000596457 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.85□□□□□ -0.19
LIG1-211ENST00000596457 ZNRF3Q9ULT6 936 aa13.85□□□□□ -0.19
LIG1-211ENST00000596457 A0A1B0GUL6 1792 aa13.85□□□□□ -0.19
LIG1-211ENST00000596457 IQCA1LA6NCM1 817 aa13.84□□□□□ -0.19
LIG1-211ENST00000596457 ECE2O60344 883 aa13.84□□□□□ -0.19
LIG1-211ENST00000596457 SIL1Q9H173 461 aa13.84□□□□□ -0.19
LIG1-211ENST00000596457 C1orf115Q9H7X2 142 aa13.84□□□□□ -0.19
LIG1-211ENST00000596457 LEMD3Q9Y2U8 911 aa13.84□□□□□ -0.19
LIG1-211ENST00000596457 COG6Q9Y2V7 657 aa13.84□□□□□ -0.19
LIG1-211ENST00000596457 SCN4AP35499 1836 aa13.84□□□□□ -0.19
LIG1-211ENST00000596457 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
LIG1-211ENST00000596457 CXCL9Q07325 125 aa13.83□□□□□ -0.2
LIG1-211ENST00000596457 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
LIG1-211ENST00000596457 CIAPIN1Q6FI81 312 aa13.83□□□□□ -0.2
LIG1-211ENST00000596457 FBXW7Q969H0 707 aa13.83□□□□□ -0.2
LIG1-211ENST00000596457 L3MBTL3Q96JM7 780 aaPredicted RBP13.83□□□□□ -0.2
LIG1-211ENST00000596457 KCNQ5Q9NR82 932 aa13.83□□□□□ -0.2
LIG1-211ENST00000596457 YDJCA8MPS7 323 aa13.82□□□□□ -0.2
LIG1-211ENST00000596457 POTECB2RU33 542 aa13.82□□□□□ -0.2
LIG1-211ENST00000596457 SRGAP3O43295 1099 aa13.82□□□□□ -0.2
LIG1-211ENST00000596457 RFX5P48382 616 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms