RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
USE1-207ENST00000596136 UTYO14607 1347 aa16.55■□□□□ 0.24
USE1-207ENST00000596136 XDHP47989 1333 aa16.55■□□□□ 0.24
USE1-207ENST00000596136 ITGA6P23229 1130 aa16.55■□□□□ 0.24
USE1-207ENST00000596136 TNIP1Q15025 636 aa16.55■□□□□ 0.24
USE1-207ENST00000596136 CIAPIN1Q6FI81 312 aa16.55■□□□□ 0.24
USE1-207ENST00000596136 DNAJC5GQ8N7S2 189 aa16.55■□□□□ 0.24
USE1-207ENST00000596136 ANKIB1Q9P2G1 1089 aa16.55■□□□□ 0.24
USE1-207ENST00000596136 GGA1Q9UJY5 639 aa16.55■□□□□ 0.24
USE1-207ENST00000596136 EPS15P42566 896 aa16.54■□□□□ 0.24
USE1-207ENST00000596136 FAM161AQ3B820 660 aa16.54■□□□□ 0.24
USE1-207ENST00000596136 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
USE1-207ENST00000596136 ZC3H12CQ9C0D7 883 aaKnown RBP16.54■□□□□ 0.24
USE1-207ENST00000596136 GPRC5DQ9NZD1 345 aa16.54■□□□□ 0.24
USE1-207ENST00000596136 RIMBP2O15034 1052 aa16.53■□□□□ 0.24
USE1-207ENST00000596136 UFL1O94874 794 aa16.53■□□□□ 0.24
USE1-207ENST00000596136 ATP2B4P23634 1241 aa16.53■□□□□ 0.24
USE1-207ENST00000596136 LMOD1P29536 600 aaPredicted RBP16.53■□□□□ 0.24
USE1-207ENST00000596136 IGHMBP2P38935 993 aaKnown RBP16.53■□□□□ 0.24
USE1-207ENST00000596136 EPHA10Q5JZY3 1008 aa16.53■□□□□ 0.24
USE1-207ENST00000596136 C9orf78Q9NZ63 289 aaPredicted RBP16.53■□□□□ 0.24
USE1-207ENST00000596136 RAD17O75943 681 aa16.52■□□□□ 0.24
USE1-207ENST00000596136 ITGBL1O95965 494 aaPredicted RBP16.52■□□□□ 0.24
USE1-207ENST00000596136 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
USE1-207ENST00000596136 KAZALD1Q96I82 304 aa16.52■□□□□ 0.24
USE1-207ENST00000596136 GPR101Q96P66 508 aaPredicted RBP16.52■□□□□ 0.24
USE1-207ENST00000596136 DBNDD1Q9H9R9 158 aa16.52■□□□□ 0.24
USE1-207ENST00000596136 SPEF2Q9C093 1822 aa16.52■□□□□ 0.23
USE1-207ENST00000596136 PASKQ96RG2 1323 aa16.51■□□□□ 0.23
USE1-207ENST00000596136 ANKRD18BA2A2Z9 1011 aa16.51■□□□□ 0.23
USE1-207ENST00000596136 ECE2O60344 883 aa16.51■□□□□ 0.23
USE1-207ENST00000596136 GMPSP49915 693 aaPredicted RBP16.51■□□□□ 0.23
USE1-207ENST00000596136 IFIT5Q13325 482 aaKnown RBP16.51■□□□□ 0.23
USE1-207ENST00000596136 EAPPQ56P03 285 aaPredicted RBP16.51■□□□□ 0.23
USE1-207ENST00000596136 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
USE1-207ENST00000596136 DPF2Q92785 391 aa16.51■□□□□ 0.23
USE1-207ENST00000596136 BCL2L13Q9BXK5 485 aa16.51■□□□□ 0.23
USE1-207ENST00000596136 SMC4Q9NTJ3 1288 aa16.51■□□□□ 0.23
USE1-207ENST00000596136 LEMD3Q9Y2U8 911 aa16.51■□□□□ 0.23
USE1-207ENST00000596136 SCN9AQ15858 1988 aa16.51■□□□□ 0.23
USE1-207ENST00000596136 WTIPA6NIX2 430 aaPredicted RBP16.5■□□□□ 0.23
USE1-207ENST00000596136 PSMD14O00487 310 aa16.5■□□□□ 0.23
USE1-207ENST00000596136 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
USE1-207ENST00000596136 CCT4P50991 539 aaKnown RBP16.5■□□□□ 0.23
USE1-207ENST00000596136 DOK7Q18PE1 504 aa16.5■□□□□ 0.23
USE1-207ENST00000596136 MPHOSPH8Q99549 860 aa16.5■□□□□ 0.23
USE1-207ENST00000596136 ANKRD2Q9GZV1 360 aa16.5■□□□□ 0.23
USE1-207ENST00000596136 KCNQ5Q9NR82 932 aa16.5■□□□□ 0.23
USE1-207ENST00000596136 ADARB2Q9NS39 739 aaKnown RBP16.5■□□□□ 0.23
USE1-207ENST00000596136 MED23Q9ULK4 1368 aa16.5■□□□□ 0.23
USE1-207ENST00000596136 VIL1P09327 827 aaKnown RBP16.49■□□□□ 0.23
USE1-207ENST00000596136 RARSP54136 660 aaKnown RBP16.49■□□□□ 0.23
USE1-207ENST00000596136 SUCLG2Q96I99 432 aa16.49■□□□□ 0.23
USE1-207ENST00000596136 USP44Q9H0E7 712 aa16.49■□□□□ 0.23
USE1-207ENST00000596136 ZNF609O15014 1411 aa16.48■□□□□ 0.23
USE1-207ENST00000596136 PSME4Q14997 1843 aa16.48■□□□□ 0.23
USE1-207ENST00000596136 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
USE1-207ENST00000596136 HTRA3P83110 453 aa16.48■□□□□ 0.23
USE1-207ENST00000596136 RABL6Q3YEC7 729 aaPredicted RBP16.48■□□□□ 0.23
USE1-207ENST00000596136 PODNQ7Z5L7 613 aa16.48■□□□□ 0.23
USE1-207ENST00000596136 PGAP2Q9UHJ9 254 aa16.48■□□□□ 0.23
USE1-207ENST00000596136 CNOT7Q9UIV1 285 aaKnown RBP16.48■□□□□ 0.23
USE1-207ENST00000596136 CLEC11AQ9Y240 323 aa16.48■□□□□ 0.23
USE1-207ENST00000596136 CHRNDQ07001 517 aa16.47■□□□□ 0.23
USE1-207ENST00000596136 CCDC57Q2TAC2 916 aa16.47■□□□□ 0.23
USE1-207ENST00000596136 CNTROBQ8N137 903 aa16.47■□□□□ 0.23
USE1-207ENST00000596136 ARHGAP45Q92619 1136 aa16.47■□□□□ 0.23
USE1-207ENST00000596136 NOB1Q9ULX3 412 aaKnown RBP16.47■□□□□ 0.23
USE1-207ENST00000596136 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
USE1-207ENST00000596136 ZNF804BA4D1E1 1349 aa16.46■□□□□ 0.23
USE1-207ENST00000596136 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
USE1-207ENST00000596136 MAP1SQ66K74 1059 aaPredicted RBP16.46■□□□□ 0.23
USE1-207ENST00000596136 C15orf52Q6ZUT6 534 aaKnown RBP16.46■□□□□ 0.23
USE1-207ENST00000596136 ZC3H15Q8WU90 426 aaKnown RBP16.46■□□□□ 0.23
USE1-207ENST00000596136 KLRG1Q96E93 195 aa16.46■□□□□ 0.23
USE1-207ENST00000596136 CREBZFQ9NS37 354 aa16.46■□□□□ 0.23
USE1-207ENST00000596136 IRS2Q9Y4H2 1338 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 G3V3G9 751 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 H7C1D1 291 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 HIRAP54198 1017 aaPredicted RBP16.45■□□□□ 0.22
USE1-207ENST00000596136 DCAF8Q5TAQ9 597 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 TXNRD3Q86VQ6 643 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 MICALL2Q8IY33 904 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 ANKRD44Q8N8A2 993 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 GMLQ99445 158 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 API5Q9BZZ5 524 aaKnown RBP16.45■□□□□ 0.22
USE1-207ENST00000596136 COA1Q9GZY4 146 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
USE1-207ENST00000596136 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
USE1-207ENST00000596136 A0A1B0GUL6 1792 aa16.44■□□□□ 0.22
USE1-207ENST00000596136 SHTN1A0MZ66 631 aa16.44■□□□□ 0.22
USE1-207ENST00000596136 LDHAL6AQ6ZMR3 332 aa16.44■□□□□ 0.22
USE1-207ENST00000596136 JMYQ8N9B5 988 aa16.44■□□□□ 0.22
USE1-207ENST00000596136 AGBL3Q8NEM8 1001 aa16.44■□□□□ 0.22
USE1-207ENST00000596136 ZNF594Q96JF6 807 aaPredicted RBP16.44■□□□□ 0.22
USE1-207ENST00000596136 KIF16BQ96L93 1317 aa16.44■□□□□ 0.22
USE1-207ENST00000596136 RSBN1LQ6PCB5 846 aaPredicted RBP16.43■□□□□ 0.22
USE1-207ENST00000596136 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
USE1-207ENST00000596136 ZNF646O15015 1829 aaPredicted RBP16.42■□□□□ 0.22
USE1-207ENST00000596136 PCNTO95613 3336 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms