RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 CIAPIN1Q6FI81 312 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 EYA3Q99504 573 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 BSDC1Q9NW68 430 aaPredicted RBP18.71■□□□□ 0.59
USE1-205ENST00000594724 C9orf78Q9NZ63 289 aaPredicted RBP18.71■□□□□ 0.59
USE1-205ENST00000594724 GGA1Q9UJY5 639 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 SCN4AP35499 1836 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 WTIPA6NIX2 430 aaPredicted RBP18.7■□□□□ 0.58
USE1-205ENST00000594724 LMOD1P29536 600 aaPredicted RBP18.7■□□□□ 0.58
USE1-205ENST00000594724 ALDH1L2Q3SY69 923 aa18.7■□□□□ 0.58
USE1-205ENST00000594724 LDHDQ86WU2 507 aa18.7■□□□□ 0.58
USE1-205ENST00000594724 ZC3H12CQ9C0D7 883 aaKnown RBP18.7■□□□□ 0.58
USE1-205ENST00000594724 SMC4Q9NTJ3 1288 aa18.7■□□□□ 0.58
USE1-205ENST00000594724 MINPP1Q9UNW1 487 aa18.7■□□□□ 0.58
USE1-205ENST00000594724 CLEC11AQ9Y240 323 aa18.7■□□□□ 0.58
USE1-205ENST00000594724 MYH3P11055 1940 aa18.7■□□□□ 0.58
USE1-205ENST00000594724 CEP350Q5VT06 3117 aa18.69■□□□□ 0.58
USE1-205ENST00000594724 IGHMBP2P38935 993 aaKnown RBP18.69■□□□□ 0.58
USE1-205ENST00000594724 EPHA10Q5JZY3 1008 aa18.69■□□□□ 0.58
USE1-205ENST00000594724 KCNQ5Q9NR82 932 aa18.69■□□□□ 0.58
USE1-205ENST00000594724 PTPRCP08575 1304 aa18.69■□□□□ 0.58
USE1-205ENST00000594724 XDHP47989 1333 aa18.69■□□□□ 0.58
USE1-205ENST00000594724 LTBP1Q14766 1721 aa18.69■□□□□ 0.58
USE1-205ENST00000594724 ECE2O60344 883 aa18.68■□□□□ 0.58
USE1-205ENST00000594724 GMPSP49915 693 aaPredicted RBP18.68■□□□□ 0.58
USE1-205ENST00000594724 TNIP1Q15025 636 aa18.68■□□□□ 0.58
USE1-205ENST00000594724 LMBR1LQ6UX01 489 aa18.68■□□□□ 0.58
USE1-205ENST00000594724 PNMA8AQ86V59 439 aaPredicted RBP18.68■□□□□ 0.58
USE1-205ENST00000594724 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
USE1-205ENST00000594724 ANKRD18BA2A2Z9 1011 aa18.67■□□□□ 0.58
USE1-205ENST00000594724 ATP2B4P23634 1241 aa18.67■□□□□ 0.58
USE1-205ENST00000594724 HNRNPUQ00839 825 aaKnown RBP eCLIP18.67■□□□□ 0.58
USE1-205ENST00000594724 MPHOSPH8Q99549 860 aa18.67■□□□□ 0.58
USE1-205ENST00000594724 GPRC5DQ9NZD1 345 aa18.67■□□□□ 0.58
USE1-205ENST00000594724 G3V3G9 751 aa18.66■□□□□ 0.58
USE1-205ENST00000594724 PSMD14O00487 310 aa18.66■□□□□ 0.58
USE1-205ENST00000594724 CT47B1P0C2W7 299 aaPredicted RBP18.66■□□□□ 0.58
USE1-205ENST00000594724 NBPF7P0C2Y1 421 aaPredicted RBP18.66■□□□□ 0.58
USE1-205ENST00000594724 DCAF8Q5TAQ9 597 aa18.66■□□□□ 0.58
USE1-205ENST00000594724 DNAJC5GQ8N7S2 189 aa18.66■□□□□ 0.58
USE1-205ENST00000594724 SUCLG2Q96I99 432 aa18.66■□□□□ 0.58
USE1-205ENST00000594724 ZBTB12Q9Y330 459 aaPredicted RBP18.66■□□□□ 0.58
USE1-205ENST00000594724 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
USE1-205ENST00000594724 IFIT5Q13325 482 aaKnown RBP18.65■□□□□ 0.58
USE1-205ENST00000594724 MAP1SQ66K74 1059 aaPredicted RBP18.65■□□□□ 0.58
USE1-205ENST00000594724 SPEF2Q9C093 1822 aa18.65■□□□□ 0.58
USE1-205ENST00000594724 SHTN1A0MZ66 631 aa18.64■□□□□ 0.57
USE1-205ENST00000594724 KAZALD1Q96I82 304 aa18.64■□□□□ 0.57
USE1-205ENST00000594724 ZNF594Q96JF6 807 aaPredicted RBP18.64■□□□□ 0.57
USE1-205ENST00000594724 NOB1Q9ULX3 412 aaKnown RBP18.64■□□□□ 0.57
USE1-205ENST00000594724 ITGBL1O95965 494 aaPredicted RBP18.63■□□□□ 0.57
USE1-205ENST00000594724 RARSP54136 660 aaKnown RBP18.63■□□□□ 0.57
USE1-205ENST00000594724 USP50Q70EL3 339 aaPredicted RBP18.63■□□□□ 0.57
USE1-205ENST00000594724 CNTROBQ8N137 903 aa18.63■□□□□ 0.57
USE1-205ENST00000594724 ADARB2Q9NS39 739 aaKnown RBP18.63■□□□□ 0.57
USE1-205ENST00000594724 CNOT7Q9UIV1 285 aaKnown RBP18.63■□□□□ 0.57
USE1-205ENST00000594724 UTYO14607 1347 aa18.63■□□□□ 0.57
USE1-205ENST00000594724 CHRNDQ07001 517 aa18.62■□□□□ 0.57
USE1-205ENST00000594724 CCDC57Q2TAC2 916 aa18.62■□□□□ 0.57
USE1-205ENST00000594724 HELBQ8NG08 1087 aaPredicted RBP18.62■□□□□ 0.57
USE1-205ENST00000594724 ANKRD2Q9GZV1 360 aa18.62■□□□□ 0.57
USE1-205ENST00000594724 ADAMTSL1Q8N6G6 1762 aa18.62■□□□□ 0.57
USE1-205ENST00000594724 PASKQ96RG2 1323 aa18.61■□□□□ 0.57
USE1-205ENST00000594724 TAF5LO75529 589 aa18.61■□□□□ 0.57
USE1-205ENST00000594724 TAF7LQ5H9L4 462 aa18.61■□□□□ 0.57
USE1-205ENST00000594724 TXNRD3Q86VQ6 643 aa18.61■□□□□ 0.57
USE1-205ENST00000594724 MICALL2Q8IY33 904 aa18.61■□□□□ 0.57
USE1-205ENST00000594724 USP44Q9H0E7 712 aa18.61■□□□□ 0.57
USE1-205ENST00000594724 BICC1Q9H694 974 aaKnown RBP18.61■□□□□ 0.57
USE1-205ENST00000594724 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
USE1-205ENST00000594724 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
USE1-205ENST00000594724 H7C1D1 291 aa18.6■□□□□ 0.57
USE1-205ENST00000594724 SNAP23O00161 211 aa18.6■□□□□ 0.57
USE1-205ENST00000594724 VIL1P09327 827 aaKnown RBP18.6■□□□□ 0.57
USE1-205ENST00000594724 BRPF1P55201 1214 aaPredicted RBP18.6■□□□□ 0.57
USE1-205ENST00000594724 LDHAL6AQ6ZMR3 332 aa18.6■□□□□ 0.57
USE1-205ENST00000594724 DPF2Q92785 391 aa18.6■□□□□ 0.57
USE1-205ENST00000594724 MED23Q9ULK4 1368 aa18.59■□□□□ 0.57
USE1-205ENST00000594724 KLRK1P26718 216 aa18.59■□□□□ 0.57
USE1-205ENST00000594724 HIRAP54198 1017 aaPredicted RBP18.59■□□□□ 0.57
USE1-205ENST00000594724 TRPM4Q8TD43 1214 aa18.59■□□□□ 0.57
USE1-205ENST00000594724 KLRG1Q96E93 195 aa18.59■□□□□ 0.57
USE1-205ENST00000594724 PLIN1O60240 522 aa18.58■□□□□ 0.56
USE1-205ENST00000594724 RPS12P25398 132 aaKnown RBP18.58■□□□□ 0.56
USE1-205ENST00000594724 KCNJ4P48050 445 aa18.58■□□□□ 0.56
USE1-205ENST00000594724 FMR1Q06787 632 aaKnown RBP eCLIP18.58■□□□□ 0.56
USE1-205ENST00000594724 SAMD7Q7Z3H4 446 aa18.58■□□□□ 0.56
USE1-205ENST00000594724 PODNQ7Z5L7 613 aa18.58■□□□□ 0.56
USE1-205ENST00000594724 ANKRD44Q8N8A2 993 aa18.58■□□□□ 0.56
USE1-205ENST00000594724 API5Q9BZZ5 524 aaKnown RBP18.58■□□□□ 0.56
USE1-205ENST00000594724 CNNM1Q9NRU3 951 aa18.58■□□□□ 0.56
USE1-205ENST00000594724 SCN9AQ15858 1988 aa18.58■□□□□ 0.56
USE1-205ENST00000594724 RABL6Q3YEC7 729 aaPredicted RBP18.57■□□□□ 0.56
USE1-205ENST00000594724 RBM26Q5T8P6 1007 aaKnown RBP18.57■□□□□ 0.56
USE1-205ENST00000594724 PUS3Q9BZE2 481 aaKnown RBP18.57■□□□□ 0.56
USE1-205ENST00000594724 USP17L3A6NCW0 530 aa18.56■□□□□ 0.56
USE1-205ENST00000594724 USP17L4A6NCW7 530 aa18.56■□□□□ 0.56
USE1-205ENST00000594724 BCAR3O75815 825 aa18.56■□□□□ 0.56
USE1-205ENST00000594724 EGFRP00533 1210 aa18.56■□□□□ 0.56
USE1-205ENST00000594724 TBC1D10BQ4KMP7 808 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms