RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 ANKRD44Q8N8A2 993 aa27.59■■■□□ 2.01
HOMER3-206ENST00000594439 BICC1Q9H694 974 aaKnown RBP27.59■■■□□ 2.01
HOMER3-206ENST00000594439 C6orf229H3BNL8 230 aa27.58■■■□□ 2.01
HOMER3-206ENST00000594439 DDNO94850 711 aaPredicted RBP27.58■■■□□ 2.01
HOMER3-206ENST00000594439 NIM1KQ8IY84 436 aa27.58■■■□□ 2.01
HOMER3-206ENST00000594439 RRAGCQ9HB90 399 aa27.58■■■□□ 2.01
HOMER3-206ENST00000594439 ANKIB1Q9P2G1 1089 aa27.58■■■□□ 2.01
HOMER3-206ENST00000594439 XDHP47989 1333 aa27.58■■■□□ 2.01
HOMER3-206ENST00000594439 GGA1Q9UJY5 639 aa27.57■■■□□ 2
HOMER3-206ENST00000594439 UFL1O94874 794 aa27.56■■■□□ 2
HOMER3-206ENST00000594439 WASHC4Q2M389 1173 aa27.56■■■□□ 2
HOMER3-206ENST00000594439 CCDC57Q2TAC2 916 aa27.56■■■□□ 2
HOMER3-206ENST00000594439 GPR101Q96P66 508 aaPredicted RBP27.56■■■□□ 2
HOMER3-206ENST00000594439 MPHOSPH8Q99549 860 aa27.56■■■□□ 2
HOMER3-206ENST00000594439 POTECB2RU33 542 aa27.55■■■□□ 2
HOMER3-206ENST00000594439 EIF6P56537 245 aaKnown RBP27.55■■■□□ 2
HOMER3-206ENST00000594439 CLUAP1Q96AJ1 413 aa27.55■■■□□ 2
HOMER3-206ENST00000594439 EYA3Q99504 573 aa27.55■■■□□ 2
HOMER3-206ENST00000594439 A0A1B0GUL6 1792 aa27.55■■■□□ 2
HOMER3-206ENST00000594439 ZNF594Q96JF6 807 aaPredicted RBP27.54■■■□□ 2
HOMER3-206ENST00000594439 ZNRF3Q9ULT6 936 aa27.54■■■□□ 2
HOMER3-206ENST00000594439 RIMBP2O15034 1052 aa27.53■■■□□ 2
HOMER3-206ENST00000594439 UBTFL1P0CB47 393 aaPredicted RBP27.53■■■□□ 2
HOMER3-206ENST00000594439 ATP2B4P23634 1241 aa27.53■■■□□ 2
HOMER3-206ENST00000594439 MEIS3Q99687 375 aa27.53■■■□□ 2
HOMER3-206ENST00000594439 WTIPA6NIX2 430 aaPredicted RBP27.52■■■□□ 2
HOMER3-206ENST00000594439 L3MBTL3Q96JM7 780 aaPredicted RBP27.52■■■□□ 2
HOMER3-206ENST00000594439 VEGFAP15692 232 aaPredicted RBP27.51■■□□□ 1.99
HOMER3-206ENST00000594439 CHRNDQ07001 517 aa27.51■■□□□ 1.99
HOMER3-206ENST00000594439 TAF7LQ5H9L4 462 aa27.51■■□□□ 1.99
HOMER3-206ENST00000594439 GPC2Q8N158 579 aa27.51■■□□□ 1.99
HOMER3-206ENST00000594439 ZC3H12CQ9C0D7 883 aaKnown RBP27.51■■□□□ 1.99
HOMER3-206ENST00000594439 ANKRD2Q9GZV1 360 aa27.51■■□□□ 1.99
HOMER3-206ENST00000594439 SCN4AP35499 1836 aa27.51■■□□□ 1.99
HOMER3-206ENST00000594439 TMEM57Q8N5G2 664 aa27.5■■□□□ 1.99
HOMER3-206ENST00000594439 YDJCA8MPS7 323 aa27.49■■□□□ 1.99
HOMER3-206ENST00000594439 CXCL9Q07325 125 aa27.49■■□□□ 1.99
HOMER3-206ENST00000594439 LDHAL6AQ6ZMR3 332 aa27.49■■□□□ 1.99
HOMER3-206ENST00000594439 DBNDD1Q9H9R9 158 aa27.49■■□□□ 1.99
HOMER3-206ENST00000594439 LEMD3Q9Y2U8 911 aa27.49■■□□□ 1.99
HOMER3-206ENST00000594439 DOK7Q18PE1 504 aa27.48■■□□□ 1.99
HOMER3-206ENST00000594439 RCAN3Q9UKA8 241 aa27.48■■□□□ 1.99
HOMER3-206ENST00000594439 HDAC5Q9UQL6 1122 aa27.48■■□□□ 1.99
HOMER3-206ENST00000594439 LRRFIP2Q9Y608 721 aaKnown RBP27.48■■□□□ 1.99
HOMER3-206ENST00000594439 GJA3Q9Y6H8 435 aa27.48■■□□□ 1.99
HOMER3-206ENST00000594439 GNAI3P08754 354 aa27.47■■□□□ 1.99
HOMER3-206ENST00000594439 C1QTNF8P60827 252 aa27.47■■□□□ 1.99
HOMER3-206ENST00000594439 DZIP1LQ8IYY4 767 aaKnown RBP27.47■■□□□ 1.99
HOMER3-206ENST00000594439 CNNM1Q9NRU3 951 aa27.47■■□□□ 1.99
HOMER3-206ENST00000594439 MED23Q9ULK4 1368 aa27.47■■□□□ 1.99
HOMER3-206ENST00000594439 ECE2O60344 883 aa27.46■■□□□ 1.99
HOMER3-206ENST00000594439 TOMM70O94826 608 aa27.46■■□□□ 1.99
HOMER3-206ENST00000594439 RLBP1P12271 317 aa27.46■■□□□ 1.99
HOMER3-206ENST00000594439 HELBQ8NG08 1087 aaPredicted RBP27.46■■□□□ 1.99
HOMER3-206ENST00000594439 YTHDC1Q96MU7 727 aaKnown RBP27.46■■□□□ 1.99
HOMER3-206ENST00000594439 PUS3Q9BZE2 481 aaKnown RBP27.46■■□□□ 1.99
HOMER3-206ENST00000594439 SCN9AQ15858 1988 aa27.46■■□□□ 1.99
HOMER3-206ENST00000594439 ZNF804BA4D1E1 1349 aa27.45■■□□□ 1.99
HOMER3-206ENST00000594439 RAD17O75943 681 aa27.45■■□□□ 1.98
HOMER3-206ENST00000594439 RFX5P48382 616 aaPredicted RBP27.45■■□□□ 1.98
HOMER3-206ENST00000594439 CIAPIN1Q6FI81 312 aa27.45■■□□□ 1.98
HOMER3-206ENST00000594439 FTSJ3Q8IY81 847 aaKnown RBP27.45■■□□□ 1.98
HOMER3-206ENST00000594439 C16orf71Q8IYS4 520 aaPredicted RBP27.45■■□□□ 1.98
HOMER3-206ENST00000594439 TAF5LO75529 589 aa27.44■■□□□ 1.98
HOMER3-206ENST00000594439 RIPOR2Q9Y4F9 1068 aa27.44■■□□□ 1.98
HOMER3-206ENST00000594439 IQCA1LA6NCM1 817 aa27.43■■□□□ 1.98
HOMER3-206ENST00000594439 TNIP1Q15025 636 aa27.43■■□□□ 1.98
HOMER3-206ENST00000594439 KLHDC4Q8TBB5 520 aa27.43■■□□□ 1.98
HOMER3-206ENST00000594439 RBM46Q8TBY0 533 aaKnown RBP27.43■■□□□ 1.98
HOMER3-206ENST00000594439 PSME4Q14997 1843 aa27.42■■□□□ 1.98
HOMER3-206ENST00000594439 SNAP23O00161 211 aa27.42■■□□□ 1.98
HOMER3-206ENST00000594439 TXNRD3Q86VQ6 643 aa27.42■■□□□ 1.98
HOMER3-206ENST00000594439 TAF1DQ9H5J8 278 aaPredicted RBP27.42■■□□□ 1.98
HOMER3-206ENST00000594439 KCNQ5Q9NR82 932 aa27.42■■□□□ 1.98
HOMER3-206ENST00000594439 HACL1Q9UJ83 578 aa27.42■■□□□ 1.98
HOMER3-206ENST00000594439 IRS2Q9Y4H2 1338 aa27.41■■□□□ 1.98
HOMER3-206ENST00000594439 G3V3G9 751 aa27.41■■□□□ 1.98
HOMER3-206ENST00000594439 KLRK1P26718 216 aa27.41■■□□□ 1.98
HOMER3-206ENST00000594439 KCNJ4P48050 445 aa27.41■■□□□ 1.98
HOMER3-206ENST00000594439 SCNN1DP51172 638 aa27.41■■□□□ 1.98
HOMER3-206ENST00000594439 LRRC24Q50LG9 513 aa27.41■■□□□ 1.98
HOMER3-206ENST00000594439 DCAF8Q5TAQ9 597 aa27.41■■□□□ 1.98
HOMER3-206ENST00000594439 PLIN1O60240 522 aa27.4■■□□□ 1.98
HOMER3-206ENST00000594439 PTPN12Q05209 780 aaKnown RBP27.4■■□□□ 1.98
HOMER3-206ENST00000594439 PANK1Q8TE04 598 aa27.4■■□□□ 1.98
HOMER3-206ENST00000594439 PSMD14O00487 310 aa27.39■■□□□ 1.98
HOMER3-206ENST00000594439 GNAI2P04899 355 aa27.39■■□□□ 1.98
HOMER3-206ENST00000594439 C15orf52Q6ZUT6 534 aaKnown RBP27.39■■□□□ 1.98
HOMER3-206ENST00000594439 ITPRIPQ8IWB1 547 aa27.39■■□□□ 1.98
HOMER3-206ENST00000594439 MROH5Q6ZUA9 1318 aa27.39■■□□□ 1.97
HOMER3-206ENST00000594439 EPHX2P34913 555 aa27.38■■□□□ 1.97
HOMER3-206ENST00000594439 GMPSP49915 693 aaPredicted RBP27.38■■□□□ 1.97
HOMER3-206ENST00000594439 LMOD1P29536 600 aaPredicted RBP27.37■■□□□ 1.97
HOMER3-206ENST00000594439 EPS15P42566 896 aa27.37■■□□□ 1.97
HOMER3-206ENST00000594439 MTX1Q13505 466 aa27.37■■□□□ 1.97
HOMER3-206ENST00000594439 PODNQ7Z5L7 613 aa27.37■■□□□ 1.97
HOMER3-206ENST00000594439 COA1Q9GZY4 146 aa27.37■■□□□ 1.97
HOMER3-206ENST00000594439 EYA2O00167 538 aa27.36■■□□□ 1.97
HOMER3-206ENST00000594439 ZBTB7BO15156 539 aaPredicted RBP27.36■■□□□ 1.97
HOMER3-206ENST00000594439 POTEIP0CG38 1075 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms