RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 MBIPQ9NS73 344 aa24.19■■□□□ 1.46
PDE4C-205ENST00000593594 CASP8AP2Q9UKL3 1982 aa24.17■■□□□ 1.46
PDE4C-205ENST00000593594 RBM26Q5T8P6 1007 aaKnown RBP24.17■■□□□ 1.46
PDE4C-205ENST00000593594 RIC3Q7Z5B4 369 aa24.17■■□□□ 1.46
PDE4C-205ENST00000593594 ZBTB38Q8NAP3 1195 aaPredicted RBP24.17■■□□□ 1.46
PDE4C-205ENST00000593594 DCPSQ96C86 337 aaKnown RBP24.16■■□□□ 1.46
PDE4C-205ENST00000593594 MCOLN1Q9GZU1 580 aa24.16■■□□□ 1.46
PDE4C-205ENST00000593594 SEC31BQ9NQW1 1179 aa24.16■■□□□ 1.46
PDE4C-205ENST00000593594 PODXL2Q9NZ53 605 aa24.16■■□□□ 1.46
PDE4C-205ENST00000593594 POLR2AP24928 1970 aaKnown RBP24.16■■□□□ 1.46
PDE4C-205ENST00000593594 ADM5C9JUS6 153 aa24.15■■□□□ 1.46
PDE4C-205ENST00000593594 ZNF853P0CG23 659 aa24.15■■□□□ 1.46
PDE4C-205ENST00000593594 RGS19P49795 217 aa24.15■■□□□ 1.46
PDE4C-205ENST00000593594 GOLGA2Q08379 1002 aa24.15■■□□□ 1.46
PDE4C-205ENST00000593594 RGMBQ6NW40 437 aa24.15■■□□□ 1.46
PDE4C-205ENST00000593594 ZC3H12CQ9C0D7 883 aaKnown RBP24.15■■□□□ 1.46
PDE4C-205ENST00000593594 PHAXQ9H814 394 aaKnown RBP24.15■■□□□ 1.46
PDE4C-205ENST00000593594 GBA2Q9HCG7 927 aaPredicted RBP24.15■■□□□ 1.46
PDE4C-205ENST00000593594 VIL1P09327 827 aaKnown RBP24.14■■□□□ 1.45
PDE4C-205ENST00000593594 C2orf69Q8N8R5 385 aa24.14■■□□□ 1.45
PDE4C-205ENST00000593594 FAM155AB1AL88 458 aaPredicted RBP24.13■■□□□ 1.45
PDE4C-205ENST00000593594 UFL1O94874 794 aa24.13■■□□□ 1.45
PDE4C-205ENST00000593594 HSP90B1P14625 803 aaKnown RBP24.13■■□□□ 1.45
PDE4C-205ENST00000593594 MLLT1Q03111 559 aaPredicted RBP24.13■■□□□ 1.45
PDE4C-205ENST00000593594 KIF4BQ2VIQ3 1234 aa24.13■■□□□ 1.45
PDE4C-205ENST00000593594 MYD88Q99836 296 aa24.13■■□□□ 1.45
PDE4C-205ENST00000593594 ANKIB1Q9P2G1 1089 aa24.13■■□□□ 1.45
PDE4C-205ENST00000593594 SCN9AQ15858 1988 aa24.12■■□□□ 1.45
PDE4C-205ENST00000593594 G3V3G9 751 aa24.11■■□□□ 1.45
PDE4C-205ENST00000593594 ELL2O00472 640 aaPredicted RBP24.11■■□□□ 1.45
PDE4C-205ENST00000593594 DGKZQ13574 1117 aa24.11■■□□□ 1.45
PDE4C-205ENST00000593594 DCAF8Q5TAQ9 597 aa24.11■■□□□ 1.45
PDE4C-205ENST00000593594 CCDC191Q8NCU4 936 aa24.11■■□□□ 1.45
PDE4C-205ENST00000593594 CCDC102AQ96A19 550 aa24.11■■□□□ 1.45
PDE4C-205ENST00000593594 GGA3Q9NZ52 723 aa24.11■■□□□ 1.45
PDE4C-205ENST00000593594 GGA1Q9UJY5 639 aa24.11■■□□□ 1.45
PDE4C-205ENST00000593594 PCCAP05165 728 aaPredicted RBP24.1■■□□□ 1.45
PDE4C-205ENST00000593594 CCDC152Q4G0S7 254 aa24.1■■□□□ 1.45
PDE4C-205ENST00000593594 SULF1Q8IWU6 871 aa24.1■■□□□ 1.45
PDE4C-205ENST00000593594 IFT57Q9NWB7 429 aa24.1■■□□□ 1.45
PDE4C-205ENST00000593594 ASTN2O75129 1339 aaPredicted RBP24.1■■□□□ 1.45
PDE4C-205ENST00000593594 PDE8AO60658 829 aa24.09■■□□□ 1.45
PDE4C-205ENST00000593594 ZNF157P51786 506 aaPredicted RBP24.09■■□□□ 1.45
PDE4C-205ENST00000593594 GNAI1P63096 354 aa24.09■■□□□ 1.45
PDE4C-205ENST00000593594 KIF23Q02241 960 aaPredicted RBP24.09■■□□□ 1.45
PDE4C-205ENST00000593594 JARID2Q92833 1246 aaPredicted RBP24.09■■□□□ 1.45
PDE4C-205ENST00000593594 APAF1O14727 1248 aa24.08■■□□□ 1.45
PDE4C-205ENST00000593594 CCDC85AQ96PX6 553 aaPredicted RBP24.08■■□□□ 1.45
PDE4C-205ENST00000593594 CWC25Q9NXE8 425 aaPredicted RBP24.08■■□□□ 1.45
PDE4C-205ENST00000593594 ZNF280AP59817 542 aaPredicted RBP24.07■■□□□ 1.44
PDE4C-205ENST00000593594 RSBN1LQ6PCB5 846 aaPredicted RBP24.07■■□□□ 1.44
PDE4C-205ENST00000593594 AGBL3Q8NEM8 1001 aa24.07■■□□□ 1.44
PDE4C-205ENST00000593594 SAGE1Q9NXZ1 904 aa24.07■■□□□ 1.44
PDE4C-205ENST00000593594 CALD1Q05682 793 aaKnown RBP24.06■■□□□ 1.44
PDE4C-205ENST00000593594 C8orf58Q8NAV2 365 aa24.06■■□□□ 1.44
PDE4C-205ENST00000593594 CDCA5Q96FF9 252 aa24.06■■□□□ 1.44
PDE4C-205ENST00000593594 METTL22Q9BUU2 404 aaPredicted RBP24.06■■□□□ 1.44
PDE4C-205ENST00000593594 ZNF609O15014 1411 aa24.06■■□□□ 1.44
PDE4C-205ENST00000593594 SLC10A3P09131 477 aa24.05■■□□□ 1.44
PDE4C-205ENST00000593594 SCARF1Q14162 830 aa24.05■■□□□ 1.44
PDE4C-205ENST00000593594 ANKRD18AQ8IVF6 992 aa24.05■■□□□ 1.44
PDE4C-205ENST00000593594 XDHP47989 1333 aa24.05■■□□□ 1.44
PDE4C-205ENST00000593594 DDX58O95786 925 aaKnown RBP24.04■■□□□ 1.44
PDE4C-205ENST00000593594 ANGEL2Q5VTE6 544 aaKnown RBP24.04■■□□□ 1.44
PDE4C-205ENST00000593594 GMLQ99445 158 aa24.04■■□□□ 1.44
PDE4C-205ENST00000593594 PRKRIP1Q9H875 184 aaPredicted RBP24.04■■□□□ 1.44
PDE4C-205ENST00000593594 RNF186Q9NXI6 227 aa24.04■■□□□ 1.44
PDE4C-205ENST00000593594 TRPA1O75762 1119 aa24.03■■□□□ 1.44
PDE4C-205ENST00000593594 USP17L8P0C7I0 530 aa24.02■■□□□ 1.44
PDE4C-205ENST00000593594 ATP2B4P23634 1241 aa24.02■■□□□ 1.44
PDE4C-205ENST00000593594 CCDC30Q5VVM6 783 aa24.02■■□□□ 1.44
PDE4C-205ENST00000593594 CSRNP1Q96S65 589 aa24.02■■□□□ 1.44
PDE4C-205ENST00000593594 PSME4Q14997 1843 aa24.02■■□□□ 1.44
PDE4C-205ENST00000593594 SLC34A2O95436 690 aa24.01■■□□□ 1.43
PDE4C-205ENST00000593594 PODNQ7Z5L7 613 aa24.01■■□□□ 1.43
PDE4C-205ENST00000593594 CHMP4AQ9BY43 222 aa24.01■■□□□ 1.43
PDE4C-205ENST00000593594 MYOZ2Q9NPC6 264 aa24.01■■□□□ 1.43
PDE4C-205ENST00000593594 MAP3K2Q9Y2U5 619 aa24.01■■□□□ 1.43
PDE4C-205ENST00000593594 USP17L3A6NCW0 530 aa24■■□□□ 1.43
PDE4C-205ENST00000593594 USP17L4A6NCW7 530 aa24■■□□□ 1.43
PDE4C-205ENST00000593594 CTSWP56202 376 aa24■■□□□ 1.43
PDE4C-205ENST00000593594 USP17L1Q7RTZ2 530 aa24■■□□□ 1.43
PDE4C-205ENST00000593594 CDC5LQ99459 802 aaKnown RBP24■■□□□ 1.43
PDE4C-205ENST00000593594 WTIPA6NIX2 430 aaPredicted RBP23.99■■□□□ 1.43
PDE4C-205ENST00000593594 RASAL3Q86YV0 1011 aa23.99■■□□□ 1.43
PDE4C-205ENST00000593594 TSPYL6Q8N831 410 aa23.99■■□□□ 1.43
PDE4C-205ENST00000593594 PITPNM2Q9BZ72 1349 aa23.99■■□□□ 1.43
PDE4C-205ENST00000593594 AKAP11Q9UKA4 1901 aa23.98■■□□□ 1.43
PDE4C-205ENST00000593594 IGKV5-2P06315 115 aa23.98■■□□□ 1.43
PDE4C-205ENST00000593594 FKBP1BP68106 108 aa23.98■■□□□ 1.43
PDE4C-205ENST00000593594 KSR2Q6VAB6 950 aa23.98■■□□□ 1.43
PDE4C-205ENST00000593594 TTLL11Q8NHH1 800 aa23.98■■□□□ 1.43
PDE4C-205ENST00000593594 PI4KAP2A4QPH2 592 aa23.97■■□□□ 1.43
PDE4C-205ENST00000593594 REM2Q8IYK8 340 aaPredicted RBP23.97■■□□□ 1.43
PDE4C-205ENST00000593594 PI4KAP1Q8N8J0 262 aa23.97■■□□□ 1.43
PDE4C-205ENST00000593594 BSDC1Q9NW68 430 aaPredicted RBP23.97■■□□□ 1.43
PDE4C-205ENST00000593594 MED23Q9ULK4 1368 aa23.97■■□□□ 1.43
PDE4C-205ENST00000593594 MINPP1Q9UNW1 487 aa23.97■■□□□ 1.43
PDE4C-205ENST00000593594 GREM2Q9H772 168 aa23.96■■□□□ 1.43
PDE4C-205ENST00000593594 SCAF8Q9UPN6 1271 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms