RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 DUOX1Q9NRD9 1551 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 IL16Q14005 1332 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 CACNA1FO60840 1977 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 SHTN1A0MZ66 631 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 YDJCA8MPS7 323 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 BBOX1O75936 387 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 RAD17O75943 681 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
H3F3B-213ENST00000593254 LRRC37AA6NMS7 1700 aa17.02■□□□□ 0.32
H3F3B-213ENST00000593254 RIC3Q7Z5B4 369 aa17.02■□□□□ 0.32
H3F3B-213ENST00000593254 USP48Q86UV5 1035 aa17.02■□□□□ 0.32
H3F3B-213ENST00000593254 MPNDQ8N594 471 aa17.02■□□□□ 0.32
H3F3B-213ENST00000593254 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
H3F3B-213ENST00000593254 RGMBQ6NW40 437 aa17.01■□□□□ 0.31
H3F3B-213ENST00000593254 DLK2Q6UY11 383 aa17.01■□□□□ 0.31
H3F3B-213ENST00000593254 MICALL2Q8IY33 904 aa17.01■□□□□ 0.31
H3F3B-213ENST00000593254 FAM89AQ96GI7 184 aa17.01■□□□□ 0.31
H3F3B-213ENST00000593254 H7C1D1 291 aa17■□□□□ 0.31
H3F3B-213ENST00000593254 KCNA4P22459 653 aa17■□□□□ 0.31
H3F3B-213ENST00000593254 GRAPQ13588 217 aa17■□□□□ 0.31
H3F3B-213ENST00000593254 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
H3F3B-213ENST00000593254 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
H3F3B-213ENST00000593254 DPF2Q92785 391 aa17■□□□□ 0.31
H3F3B-213ENST00000593254 U3KPZ7 1027 aaPredicted RBP17■□□□□ 0.31
H3F3B-213ENST00000593254 SOX10P56693 466 aa16.99■□□□□ 0.31
H3F3B-213ENST00000593254 SF3B3Q15393 1217 aaKnown RBP16.99■□□□□ 0.31
H3F3B-213ENST00000593254 MKI67P46013 3256 aaKnown RBP16.99■□□□□ 0.31
H3F3B-213ENST00000593254 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
H3F3B-213ENST00000593254 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
H3F3B-213ENST00000593254 SAMD7Q7Z3H4 446 aa16.98■□□□□ 0.31
H3F3B-213ENST00000593254 CCDC102AQ96A19 550 aa16.98■□□□□ 0.31
H3F3B-213ENST00000593254 MYD88Q99836 296 aa16.98■□□□□ 0.31
H3F3B-213ENST00000593254 GBA2Q9HCG7 927 aaPredicted RBP16.98■□□□□ 0.31
H3F3B-213ENST00000593254 RNF186Q9NXI6 227 aa16.98■□□□□ 0.31
H3F3B-213ENST00000593254 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
H3F3B-213ENST00000593254 COL4A1P02462 1669 aa16.97■□□□□ 0.31
H3F3B-213ENST00000593254 FANCIQ9NVI1 1328 aa16.97■□□□□ 0.31
H3F3B-213ENST00000593254 IRS4O14654 1257 aaPredicted RBP16.97■□□□□ 0.31
H3F3B-213ENST00000593254 EGFRP00533 1210 aa16.97■□□□□ 0.31
H3F3B-213ENST00000593254 KIF23Q02241 960 aaPredicted RBP16.97■□□□□ 0.31
H3F3B-213ENST00000593254 RTL5Q5HYW3 569 aaPredicted RBP16.97■□□□□ 0.31
H3F3B-213ENST00000593254 PRPF38BQ5VTL8 546 aaKnown RBP16.97■□□□□ 0.31
H3F3B-213ENST00000593254 KRT26Q7Z3Y9 468 aa16.97■□□□□ 0.31
H3F3B-213ENST00000593254 TMC4Q7Z404 712 aa16.97■□□□□ 0.31
H3F3B-213ENST00000593254 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
H3F3B-213ENST00000593254 ZBTB38Q8NAP3 1195 aaPredicted RBP16.97■□□□□ 0.31
H3F3B-213ENST00000593254 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
H3F3B-213ENST00000593254 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
H3F3B-213ENST00000593254 STK31Q9BXU1 1019 aa16.97■□□□□ 0.31
H3F3B-213ENST00000593254 PSMD14O00487 310 aa16.96■□□□□ 0.31
H3F3B-213ENST00000593254 TRPA1O75762 1119 aa16.96■□□□□ 0.31
H3F3B-213ENST00000593254 C2orf69Q8N8R5 385 aa16.96■□□□□ 0.31
H3F3B-213ENST00000593254 MYH3P11055 1940 aa16.96■□□□□ 0.3
H3F3B-213ENST00000593254 PCCAP05165 728 aaPredicted RBP16.95■□□□□ 0.3
H3F3B-213ENST00000593254 ZNF157P51786 506 aaPredicted RBP16.95■□□□□ 0.3
H3F3B-213ENST00000593254 TBC1D10BQ4KMP7 808 aaPredicted RBP16.95■□□□□ 0.3
H3F3B-213ENST00000593254 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
H3F3B-213ENST00000593254 CSRNP1Q96S65 589 aa16.95■□□□□ 0.3
H3F3B-213ENST00000593254 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
H3F3B-213ENST00000593254 MAP3K2Q9Y2U5 619 aa16.95■□□□□ 0.3
H3F3B-213ENST00000593254 SALL2Q9Y467 1007 aaPredicted RBP16.95■□□□□ 0.3
H3F3B-213ENST00000593254 PI4KAP2A4QPH2 592 aa16.94■□□□□ 0.3
H3F3B-213ENST00000593254 ADM5C9JUS6 153 aa16.94■□□□□ 0.3
H3F3B-213ENST00000593254 SLC10A3P09131 477 aa16.94■□□□□ 0.3
H3F3B-213ENST00000593254 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
H3F3B-213ENST00000593254 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
H3F3B-213ENST00000593254 FAM9BQ8IZU0 186 aa16.94■□□□□ 0.3
H3F3B-213ENST00000593254 PI4KAP1Q8N8J0 262 aa16.94■□□□□ 0.3
H3F3B-213ENST00000593254 CELF1Q92879 486 aaKnown RBP16.94■□□□□ 0.3
H3F3B-213ENST00000593254 HTTP42858 3142 aa16.93■□□□□ 0.3
H3F3B-213ENST00000593254 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
H3F3B-213ENST00000593254 RPS12P25398 132 aaKnown RBP16.93■□□□□ 0.3
H3F3B-213ENST00000593254 WASHC4Q2M389 1173 aa16.93■□□□□ 0.3
H3F3B-213ENST00000593254 DCPSQ96C86 337 aaKnown RBP16.93■□□□□ 0.3
H3F3B-213ENST00000593254 CENPFP49454 3210 aa16.93■□□□□ 0.3
H3F3B-213ENST00000593254 SCN9AQ15858 1988 aa16.93■□□□□ 0.3
H3F3B-213ENST00000593254 RTL9Q8NET4 1388 aa16.92■□□□□ 0.3
H3F3B-213ENST00000593254 IGKV5-2P06315 115 aa16.92■□□□□ 0.3
H3F3B-213ENST00000593254 G2E3Q7L622 706 aa16.92■□□□□ 0.3
H3F3B-213ENST00000593254 DBNDD1Q9H9R9 158 aa16.92■□□□□ 0.3
H3F3B-213ENST00000593254 PDE8AO60658 829 aa16.91■□□□□ 0.3
H3F3B-213ENST00000593254 VAMP4O75379 141 aa16.91■□□□□ 0.3
H3F3B-213ENST00000593254 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
H3F3B-213ENST00000593254 KCNQ5Q9NR82 932 aa16.91■□□□□ 0.3
H3F3B-213ENST00000593254 POLLQ9UGP5 575 aa16.91■□□□□ 0.3
H3F3B-213ENST00000593254 BRCA2P51587 3418 aa16.91■□□□□ 0.3
H3F3B-213ENST00000593254 RPS8P62241 208 aaKnown RBP16.9■□□□□ 0.3
H3F3B-213ENST00000593254 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
H3F3B-213ENST00000593254 NEXNQ0ZGT2 675 aa16.9■□□□□ 0.3
H3F3B-213ENST00000593254 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
H3F3B-213ENST00000593254 HPS5Q9UPZ3 1129 aa16.9■□□□□ 0.3
H3F3B-213ENST00000593254 ECE2O60344 883 aa16.89■□□□□ 0.29
H3F3B-213ENST00000593254 FLIIQ13045 1269 aa16.89■□□□□ 0.29
H3F3B-213ENST00000593254 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
H3F3B-213ENST00000593254 RBM26Q5T8P6 1007 aaKnown RBP16.89■□□□□ 0.29
H3F3B-213ENST00000593254 RASAL3Q86YV0 1011 aa16.89■□□□□ 0.29
H3F3B-213ENST00000593254 JARID2Q92833 1246 aaPredicted RBP16.89■□□□□ 0.29
H3F3B-213ENST00000593254 SEC31BQ9NQW1 1179 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms