RNA–Protein interactions for RNA: ENST00000593112.1

BECN1-219, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-219ENST00000593112 ITGBL1O95965 494 aaPredicted RBP22.29■■□□□ 1.16
BECN1-219ENST00000593112 CSF1RP07333 972 aa22.29■■□□□ 1.16
BECN1-219ENST00000593112 GMPSP49915 693 aaPredicted RBP22.29■■□□□ 1.16
BECN1-219ENST00000593112 FAM161AQ3B820 660 aa22.29■■□□□ 1.16
BECN1-219ENST00000593112 KCNQ5Q9NR82 932 aa22.29■■□□□ 1.16
BECN1-219ENST00000593112 GPRC5DQ9NZD1 345 aa22.29■■□□□ 1.16
BECN1-219ENST00000593112 PASKQ96RG2 1323 aa22.29■■□□□ 1.16
BECN1-219ENST00000593112 LMOD1P29536 600 aaPredicted RBP22.28■■□□□ 1.16
BECN1-219ENST00000593112 DOK7Q18PE1 504 aa22.28■■□□□ 1.16
BECN1-219ENST00000593112 MAP1SQ66K74 1059 aaPredicted RBP22.28■■□□□ 1.16
BECN1-219ENST00000593112 PNMA8AQ86V59 439 aaPredicted RBP22.28■■□□□ 1.16
BECN1-219ENST00000593112 SSH1Q8WYL5 1049 aa22.28■■□□□ 1.16
BECN1-219ENST00000593112 CDC5LQ99459 802 aaKnown RBP22.28■■□□□ 1.16
BECN1-219ENST00000593112 ANKIB1Q9P2G1 1089 aa22.28■■□□□ 1.16
BECN1-219ENST00000593112 POLR2AP24928 1970 aaKnown RBP22.28■■□□□ 1.16
BECN1-219ENST00000593112 TRPM7Q96QT4 1865 aa22.28■■□□□ 1.16
BECN1-219ENST00000593112 SHTN1A0MZ66 631 aa22.27■■□□□ 1.16
BECN1-219ENST00000593112 ECE2O60344 883 aa22.27■■□□□ 1.16
BECN1-219ENST00000593112 FOXO4P98177 505 aa22.27■■□□□ 1.16
BECN1-219ENST00000593112 MIER1Q8N108 512 aa22.27■■□□□ 1.16
BECN1-219ENST00000593112 GGA1Q9UJY5 639 aa22.27■■□□□ 1.16
BECN1-219ENST00000593112 MINPP1Q9UNW1 487 aa22.27■■□□□ 1.16
BECN1-219ENST00000593112 CLEC11AQ9Y240 323 aa22.27■■□□□ 1.16
BECN1-219ENST00000593112 ITGA6P23229 1130 aa22.26■■□□□ 1.15
BECN1-219ENST00000593112 EPHA10Q5JZY3 1008 aa22.26■■□□□ 1.15
BECN1-219ENST00000593112 SLC4A10Q6U841 1118 aa22.26■■□□□ 1.15
BECN1-219ENST00000593112 KLRG1Q96E93 195 aa22.26■■□□□ 1.15
BECN1-219ENST00000593112 EYA3Q99504 573 aa22.26■■□□□ 1.15
BECN1-219ENST00000593112 BCL2L13Q9BXK5 485 aa22.26■■□□□ 1.15
BECN1-219ENST00000593112 BSDC1Q9NW68 430 aaPredicted RBP22.26■■□□□ 1.15
BECN1-219ENST00000593112 XDHP47989 1333 aa22.26■■□□□ 1.15
BECN1-219ENST00000593112 PSMD14O00487 310 aa22.25■■□□□ 1.15
BECN1-219ENST00000593112 TNIP1Q15025 636 aa22.25■■□□□ 1.15
BECN1-219ENST00000593112 ZBTB12Q9Y330 459 aaPredicted RBP22.25■■□□□ 1.15
BECN1-219ENST00000593112 GRM8O00222 908 aa22.24■■□□□ 1.15
BECN1-219ENST00000593112 DIEXFQ68CQ4 756 aaKnown RBP22.24■■□□□ 1.15
BECN1-219ENST00000593112 ZC3H12CQ9C0D7 883 aaKnown RBP22.24■■□□□ 1.15
BECN1-219ENST00000593112 PCNTO95613 3336 aa22.24■■□□□ 1.15
BECN1-219ENST00000593112 ALDH1L1O75891 902 aa22.23■■□□□ 1.15
BECN1-219ENST00000593112 USP50Q70EL3 339 aaPredicted RBP22.23■■□□□ 1.15
BECN1-219ENST00000593112 CNTROBQ8N137 903 aa22.23■■□□□ 1.15
BECN1-219ENST00000593112 SRCIN1Q9C0H9 1055 aa22.23■■□□□ 1.15
BECN1-219ENST00000593112 ADARB2Q9NS39 739 aaKnown RBP22.23■■□□□ 1.15
BECN1-219ENST00000593112 ATP2B4P23634 1241 aa22.22■■□□□ 1.15
BECN1-219ENST00000593112 FMR1Q06787 632 aaKnown RBP eCLIP22.22■■□□□ 1.15
BECN1-219ENST00000593112 TRPM4Q8TD43 1214 aa22.22■■□□□ 1.15
BECN1-219ENST00000593112 IGHMBP2P38935 993 aaKnown RBP22.21■■□□□ 1.15
BECN1-219ENST00000593112 HIRAP54198 1017 aaPredicted RBP22.21■■□□□ 1.15
BECN1-219ENST00000593112 KAZALD1Q96I82 304 aa22.21■■□□□ 1.15
BECN1-219ENST00000593112 CCT4P50991 539 aaKnown RBP22.2■■□□□ 1.14
BECN1-219ENST00000593112 LMBR1LQ6UX01 489 aa22.2■■□□□ 1.14
BECN1-219ENST00000593112 JMYQ8N9B5 988 aa22.2■■□□□ 1.14
BECN1-219ENST00000593112 CREBZFQ9NS37 354 aa22.2■■□□□ 1.14
BECN1-219ENST00000593112 CNOT7Q9UIV1 285 aaKnown RBP22.2■■□□□ 1.14
BECN1-219ENST00000593112 EGFRP00533 1210 aa22.19■■□□□ 1.14
BECN1-219ENST00000593112 NBPF7P0C2Y1 421 aaPredicted RBP22.19■■□□□ 1.14
BECN1-219ENST00000593112 TXNRD3Q86VQ6 643 aa22.19■■□□□ 1.14
BECN1-219ENST00000593112 MICALL2Q8IY33 904 aa22.19■■□□□ 1.14
BECN1-219ENST00000593112 SUCLG2Q96I99 432 aa22.19■■□□□ 1.14
BECN1-219ENST00000593112 C9orf78Q9NZ63 289 aaPredicted RBP22.19■■□□□ 1.14
BECN1-219ENST00000593112 PTPRCP08575 1304 aa22.19■■□□□ 1.14
BECN1-219ENST00000593112 MED23Q9ULK4 1368 aa22.19■■□□□ 1.14
BECN1-219ENST00000593112 UTYO14607 1347 aa22.18■■□□□ 1.14
BECN1-219ENST00000593112 ANKRD18BA2A2Z9 1011 aa22.18■■□□□ 1.14
BECN1-219ENST00000593112 VIL1P09327 827 aaKnown RBP22.18■■□□□ 1.14
BECN1-219ENST00000593112 KLRK1P26718 216 aa22.18■■□□□ 1.14
BECN1-219ENST00000593112 ALDH1L2Q3SY69 923 aa22.18■■□□□ 1.14
BECN1-219ENST00000593112 SNAP23O00161 211 aa22.17■■□□□ 1.14
BECN1-219ENST00000593112 TRAF5O00463 557 aa22.17■■□□□ 1.14
BECN1-219ENST00000593112 DPF2Q92785 391 aa22.17■■□□□ 1.14
BECN1-219ENST00000593112 ZNF594Q96JF6 807 aaPredicted RBP22.17■■□□□ 1.14
BECN1-219ENST00000593112 MPHOSPH8Q99549 860 aa22.17■■□□□ 1.14
BECN1-219ENST00000593112 SMC4Q9NTJ3 1288 aa22.17■■□□□ 1.14
BECN1-219ENST00000593112 CHMP3Q9Y3E7 222 aa22.17■■□□□ 1.14
BECN1-219ENST00000593112 CHRNDQ07001 517 aa22.16■■□□□ 1.14
BECN1-219ENST00000593112 IFIT5Q13325 482 aaKnown RBP22.16■■□□□ 1.14
BECN1-219ENST00000593112 SAMD7Q7Z3H4 446 aa22.16■■□□□ 1.14
BECN1-219ENST00000593112 PGAP2Q9UHJ9 254 aa22.16■■□□□ 1.14
BECN1-219ENST00000593112 TMEM88BA6NKF7 163 aa22.15■■□□□ 1.14
BECN1-219ENST00000593112 G3V3G9 751 aa22.15■■□□□ 1.14
BECN1-219ENST00000593112 DCAF8Q5TAQ9 597 aa22.15■■□□□ 1.14
BECN1-219ENST00000593112 HELBQ8NG08 1087 aaPredicted RBP22.15■■□□□ 1.14
BECN1-219ENST00000593112 MKRN1Q9UHC7 482 aaKnown RBP22.15■■□□□ 1.14
BECN1-219ENST00000593112 LEMD3Q9Y2U8 911 aa22.15■■□□□ 1.14
BECN1-219ENST00000593112 ZNF609O15014 1411 aa22.14■■□□□ 1.14
BECN1-219ENST00000593112 ZNF804BA4D1E1 1349 aa22.14■■□□□ 1.14
BECN1-219ENST00000593112 IRS2Q9Y4H2 1338 aa22.14■■□□□ 1.14
BECN1-219ENST00000593112 RPS12P25398 132 aaKnown RBP22.14■■□□□ 1.13
BECN1-219ENST00000593112 TBC1D10BQ4KMP7 808 aaPredicted RBP22.14■■□□□ 1.13
BECN1-219ENST00000593112 H7C1D1 291 aa22.13■■□□□ 1.13
BECN1-219ENST00000593112 TAF5LO75529 589 aa22.13■■□□□ 1.13
BECN1-219ENST00000593112 GMLQ99445 158 aa22.13■■□□□ 1.13
BECN1-219ENST00000593112 GLIS2Q9BZE0 524 aaPredicted RBP22.13■■□□□ 1.13
BECN1-219ENST00000593112 ANKRD2Q9GZV1 360 aa22.13■■□□□ 1.13
BECN1-219ENST00000593112 CNTNAP1P78357 1384 aa22.12■■□□□ 1.13
BECN1-219ENST00000593112 CT47B1P0C2W7 299 aaPredicted RBP22.12■■□□□ 1.13
BECN1-219ENST00000593112 RSBN1LQ6PCB5 846 aaPredicted RBP22.12■■□□□ 1.13
BECN1-219ENST00000593112 PODNQ7Z5L7 613 aa22.12■■□□□ 1.13
BECN1-219ENST00000593112 ANKRD44Q8N8A2 993 aa22.12■■□□□ 1.13
BECN1-219ENST00000593112 USP44Q9H0E7 712 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms