RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 GJA3Q9Y6H8 435 aa19.86■□□□□ 0.77
LIG3-215ENST00000592690 UFL1O94874 794 aa19.85■□□□□ 0.77
LIG3-215ENST00000592690 WASHC4Q2M389 1173 aa19.85■□□□□ 0.77
LIG3-215ENST00000592690 LMBR1LQ6UX01 489 aa19.85■□□□□ 0.77
LIG3-215ENST00000592690 KAZALD1Q96I82 304 aa19.85■□□□□ 0.77
LIG3-215ENST00000592690 CHMP3Q9Y3E7 222 aa19.85■□□□□ 0.77
LIG3-215ENST00000592690 ADAMTSL1Q8N6G6 1762 aa19.85■□□□□ 0.77
LIG3-215ENST00000592690 XDHP47989 1333 aa19.84■□□□□ 0.77
LIG3-215ENST00000592690 YDJCA8MPS7 323 aa19.84■□□□□ 0.77
LIG3-215ENST00000592690 IGHMBP2P38935 993 aaKnown RBP19.84■□□□□ 0.77
LIG3-215ENST00000592690 CXCL9Q07325 125 aa19.84■□□□□ 0.77
LIG3-215ENST00000592690 GGA1Q9UJY5 639 aa19.84■□□□□ 0.77
LIG3-215ENST00000592690 MINPP1Q9UNW1 487 aa19.84■□□□□ 0.77
LIG3-215ENST00000592690 ZNF646O15015 1829 aaPredicted RBP19.83■□□□□ 0.77
LIG3-215ENST00000592690 KIF16BQ96L93 1317 aa19.83■□□□□ 0.77
LIG3-215ENST00000592690 ANKRD18BA2A2Z9 1011 aa19.83■□□□□ 0.77
LIG3-215ENST00000592690 EYA3Q99504 573 aa19.83■□□□□ 0.77
LIG3-215ENST00000592690 DBNDD1Q9H9R9 158 aa19.83■□□□□ 0.77
LIG3-215ENST00000592690 IQCA1LA6NCM1 817 aa19.82■□□□□ 0.76
LIG3-215ENST00000592690 WTIPA6NIX2 430 aaPredicted RBP19.82■□□□□ 0.76
LIG3-215ENST00000592690 BCAR3O75815 825 aa19.82■□□□□ 0.76
LIG3-215ENST00000592690 POTEIP0CG38 1075 aa19.82■□□□□ 0.76
LIG3-215ENST00000592690 POTEJP0CG39 1038 aa19.82■□□□□ 0.76
LIG3-215ENST00000592690 IFIT5Q13325 482 aaKnown RBP19.82■□□□□ 0.76
LIG3-215ENST00000592690 API5Q9BZZ5 524 aaKnown RBP19.82■□□□□ 0.76
LIG3-215ENST00000592690 USP44Q9H0E7 712 aa19.82■□□□□ 0.76
LIG3-215ENST00000592690 TAF1DQ9H5J8 278 aaPredicted RBP19.82■□□□□ 0.76
LIG3-215ENST00000592690 HACL1Q9UJ83 578 aa19.82■□□□□ 0.76
LIG3-215ENST00000592690 RAD17O75943 681 aa19.81■□□□□ 0.76
LIG3-215ENST00000592690 SCNN1DP51172 638 aa19.81■□□□□ 0.76
LIG3-215ENST00000592690 DOK7Q18PE1 504 aa19.81■□□□□ 0.76
LIG3-215ENST00000592690 ZNF594Q96JF6 807 aaPredicted RBP19.81■□□□□ 0.76
LIG3-215ENST00000592690 MPHOSPH8Q99549 860 aa19.81■□□□□ 0.76
LIG3-215ENST00000592690 BICC1Q9H694 974 aaKnown RBP19.81■□□□□ 0.76
LIG3-215ENST00000592690 ECE2O60344 883 aa19.8■□□□□ 0.76
LIG3-215ENST00000592690 HSPA6P17066 643 aa19.8■□□□□ 0.76
LIG3-215ENST00000592690 ATP2B4P23634 1241 aa19.8■□□□□ 0.76
LIG3-215ENST00000592690 CCT4P50991 539 aaKnown RBP19.8■□□□□ 0.76
LIG3-215ENST00000592690 CIAPIN1Q6FI81 312 aa19.8■□□□□ 0.76
LIG3-215ENST00000592690 SMC1BQ8NDV3 1235 aa19.8■□□□□ 0.76
LIG3-215ENST00000592690 ZC3H12CQ9C0D7 883 aaKnown RBP19.8■□□□□ 0.76
LIG3-215ENST00000592690 EPHX2P34913 555 aa19.79■□□□□ 0.76
LIG3-215ENST00000592690 FSTL1Q12841 308 aa19.79■□□□□ 0.76
LIG3-215ENST00000592690 ANKRD44Q8N8A2 993 aa19.79■□□□□ 0.76
LIG3-215ENST00000592690 TNNQ9UQP3 1299 aa19.79■□□□□ 0.76
LIG3-215ENST00000592690 CHRNDQ07001 517 aa19.78■□□□□ 0.76
LIG3-215ENST00000592690 CCDC57Q2TAC2 916 aa19.78■□□□□ 0.76
LIG3-215ENST00000592690 RABL6Q3YEC7 729 aaPredicted RBP19.78■□□□□ 0.76
LIG3-215ENST00000592690 ARHGAP45Q92619 1136 aa19.78■□□□□ 0.76
LIG3-215ENST00000592690 KCNQ5Q9NR82 932 aa19.78■□□□□ 0.76
LIG3-215ENST00000592690 MED23Q9ULK4 1368 aa19.78■□□□□ 0.76
LIG3-215ENST00000592690 TRIM27P14373 513 aa19.77■□□□□ 0.76
LIG3-215ENST00000592690 LMOD1P29536 600 aaPredicted RBP19.77■□□□□ 0.76
LIG3-215ENST00000592690 EPS15P42566 896 aa19.77■□□□□ 0.76
LIG3-215ENST00000592690 GMPSP49915 693 aaPredicted RBP19.77■□□□□ 0.76
LIG3-215ENST00000592690 EAPPQ56P03 285 aaPredicted RBP19.77■□□□□ 0.76
LIG3-215ENST00000592690 FRAT1Q92837 279 aaPredicted RBP19.77■□□□□ 0.76
LIG3-215ENST00000592690 CEP350Q5VT06 3117 aa19.77■□□□□ 0.76
LIG3-215ENST00000592690 PSMD14O00487 310 aa19.76■□□□□ 0.75
LIG3-215ENST00000592690 TNIP1Q15025 636 aa19.76■□□□□ 0.75
LIG3-215ENST00000592690 TAF7LQ5H9L4 462 aa19.76■□□□□ 0.75
LIG3-215ENST00000592690 ANKRD2Q9GZV1 360 aa19.76■□□□□ 0.75
LIG3-215ENST00000592690 GPRC5DQ9NZD1 345 aa19.76■□□□□ 0.75
LIG3-215ENST00000592690 TAF5LO75529 589 aa19.75■□□□□ 0.75
LIG3-215ENST00000592690 KLRK1P26718 216 aa19.75■□□□□ 0.75
LIG3-215ENST00000592690 INTS3Q68E01 1043 aaKnown RBP19.75■□□□□ 0.75
LIG3-215ENST00000592690 CHADLQ6NUI6 762 aa19.75■□□□□ 0.75
LIG3-215ENST00000592690 ATF7IPQ6VMQ6 1270 aa19.75■□□□□ 0.75
LIG3-215ENST00000592690 LDHAL6AQ6ZMR3 332 aa19.75■□□□□ 0.75
LIG3-215ENST00000592690 LDHDQ86WU2 507 aa19.75■□□□□ 0.75
LIG3-215ENST00000592690 HELBQ8NG08 1087 aaPredicted RBP19.75■□□□□ 0.75
LIG3-215ENST00000592690 LEMD3Q9Y2U8 911 aa19.75■□□□□ 0.75
LIG3-215ENST00000592690 ZNF804BA4D1E1 1349 aa19.75■□□□□ 0.75
LIG3-215ENST00000592690 G3V3G9 751 aa19.74■□□□□ 0.75
LIG3-215ENST00000592690 SNAP23O00161 211 aa19.74■□□□□ 0.75
LIG3-215ENST00000592690 IPO8O15397 1037 aaKnown RBP19.74■□□□□ 0.75
LIG3-215ENST00000592690 DCAF8Q5TAQ9 597 aa19.74■□□□□ 0.75
LIG3-215ENST00000592690 TXNRD3Q86VQ6 643 aa19.74■□□□□ 0.75
LIG3-215ENST00000592690 CNNM1Q9NRU3 951 aa19.74■□□□□ 0.75
LIG3-215ENST00000592690 ZBTB12Q9Y330 459 aaPredicted RBP19.74■□□□□ 0.75
LIG3-215ENST00000592690 SHTN1A0MZ66 631 aa19.73■□□□□ 0.75
LIG3-215ENST00000592690 UBTFL1P0CB47 393 aaPredicted RBP19.73■□□□□ 0.75
LIG3-215ENST00000592690 PNMA8AQ86V59 439 aaPredicted RBP19.73■□□□□ 0.75
LIG3-215ENST00000592690 CLUAP1Q96AJ1 413 aa19.73■□□□□ 0.75
LIG3-215ENST00000592690 MEIS3Q99687 375 aa19.73■□□□□ 0.75
LIG3-215ENST00000592690 PUS3Q9BZE2 481 aaKnown RBP19.73■□□□□ 0.75
LIG3-215ENST00000592690 KCNJ4P48050 445 aa19.72■□□□□ 0.75
LIG3-215ENST00000592690 CLEC11AQ9Y240 323 aa19.72■□□□□ 0.75
LIG3-215ENST00000592690 IRS2Q9Y4H2 1338 aa19.72■□□□□ 0.75
LIG3-215ENST00000592690 POLR2AP24928 1970 aaKnown RBP19.72■□□□□ 0.75
LIG3-215ENST00000592690 ZKSCAN2Q63HK3 967 aa19.71■□□□□ 0.75
LIG3-215ENST00000592690 KLHDC4Q8TBB5 520 aa19.71■□□□□ 0.75
LIG3-215ENST00000592690 LRRFIP2Q9Y608 721 aaKnown RBP19.71■□□□□ 0.75
LIG3-215ENST00000592690 PLIN1O60240 522 aa19.7■□□□□ 0.74
LIG3-215ENST00000592690 APLP1P51693 650 aa19.7■□□□□ 0.74
LIG3-215ENST00000592690 PODNQ7Z5L7 613 aa19.7■□□□□ 0.74
LIG3-215ENST00000592690 ADARB2Q9NS39 739 aaKnown RBP19.7■□□□□ 0.74
LIG3-215ENST00000592690 TRPM7Q96QT4 1865 aa19.69■□□□□ 0.74
LIG3-215ENST00000592690 VIL1P09327 827 aaKnown RBP19.69■□□□□ 0.74
LIG3-215ENST00000592690 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms