RNA–Protein interactions for RNA: ENST00000592578.5

PSME3-215, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-215ENST00000592578 MBIPQ9NS73 344 aa18.48■□□□□ 0.55
PSME3-215ENST00000592578 SHTN1A0MZ66 631 aa18.47■□□□□ 0.55
PSME3-215ENST00000592578 G3V3G9 751 aa18.47■□□□□ 0.55
PSME3-215ENST00000592578 GNAI1P63096 354 aa18.47■□□□□ 0.55
PSME3-215ENST00000592578 KIF4BQ2VIQ3 1234 aa18.47■□□□□ 0.55
PSME3-215ENST00000592578 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
PSME3-215ENST00000592578 DUSP27Q5VZP5 1158 aa18.47■□□□□ 0.55
PSME3-215ENST00000592578 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
PSME3-215ENST00000592578 CHPF2Q9P2E5 772 aa18.47■□□□□ 0.55
PSME3-215ENST00000592578 DBF4Q9UBU7 674 aaPredicted RBP18.47■□□□□ 0.55
PSME3-215ENST00000592578 NSFL1CQ9UNZ2 370 aaKnown RBP18.47■□□□□ 0.55
PSME3-215ENST00000592578 C6orf229H3BNL8 230 aa18.46■□□□□ 0.55
PSME3-215ENST00000592578 ANP32CO43423 234 aa18.46■□□□□ 0.55
PSME3-215ENST00000592578 ZNF853P0CG23 659 aa18.46■□□□□ 0.55
PSME3-215ENST00000592578 DBNDD1Q9H9R9 158 aa18.46■□□□□ 0.55
PSME3-215ENST00000592578 TRMT112Q9UI30 125 aaKnown RBP18.46■□□□□ 0.55
PSME3-215ENST00000592578 SH3TC1Q8TE82 1336 aa18.46■□□□□ 0.55
PSME3-215ENST00000592578 HCLS1P14317 486 aaPredicted RBP18.45■□□□□ 0.54
PSME3-215ENST00000592578 TCIRG1Q13488 830 aa18.45■□□□□ 0.54
PSME3-215ENST00000592578 CCDC184Q52MB2 194 aa18.45■□□□□ 0.54
PSME3-215ENST00000592578 DLK2Q6UY11 383 aa18.45■□□□□ 0.54
PSME3-215ENST00000592578 GGA3Q9NZ52 723 aa18.45■□□□□ 0.54
PSME3-215ENST00000592578 RIMBP2O15034 1052 aa18.44■□□□□ 0.54
PSME3-215ENST00000592578 FBXO46Q6PJ61 603 aaPredicted RBP18.44■□□□□ 0.54
PSME3-215ENST00000592578 RASAL3Q86YV0 1011 aa18.44■□□□□ 0.54
PSME3-215ENST00000592578 CDCA5Q96FF9 252 aa18.44■□□□□ 0.54
PSME3-215ENST00000592578 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
PSME3-215ENST00000592578 LAMB2P55268 1798 aa18.43■□□□□ 0.54
PSME3-215ENST00000592578 ECE2O60344 883 aa18.43■□□□□ 0.54
PSME3-215ENST00000592578 ANKRD13DQ6ZTN6 518 aa18.43■□□□□ 0.54
PSME3-215ENST00000592578 PLBD2Q8NHP8 589 aa18.43■□□□□ 0.54
PSME3-215ENST00000592578 HYPKQ9NX55 129 aa18.43■□□□□ 0.54
PSME3-215ENST00000592578 NOM1Q5C9Z4 860 aaKnown RBP18.42■□□□□ 0.54
PSME3-215ENST00000592578 NLRP10Q86W26 655 aa18.42■□□□□ 0.54
PSME3-215ENST00000592578 ZNF296Q8WUU4 475 aaPredicted RBP18.42■□□□□ 0.54
PSME3-215ENST00000592578 ZC3H12CQ9C0D7 883 aaKnown RBP18.42■□□□□ 0.54
PSME3-215ENST00000592578 MRS2Q9HD23 443 aa18.42■□□□□ 0.54
PSME3-215ENST00000592578 EGFRP00533 1210 aa18.41■□□□□ 0.54
PSME3-215ENST00000592578 CHMP4AQ9BY43 222 aa18.41■□□□□ 0.54
PSME3-215ENST00000592578 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
PSME3-215ENST00000592578 PAPPA2Q9BXP8 1791 aa18.4■□□□□ 0.54
PSME3-215ENST00000592578 GPR25O00155 361 aa18.39■□□□□ 0.53
PSME3-215ENST00000592578 ELL2O00472 640 aaPredicted RBP18.39■□□□□ 0.53
PSME3-215ENST00000592578 TBC1D8O95759 1140 aa18.39■□□□□ 0.53
PSME3-215ENST00000592578 VIL1P09327 827 aaKnown RBP18.39■□□□□ 0.53
PSME3-215ENST00000592578 NF2P35240 595 aa18.39■□□□□ 0.53
PSME3-215ENST00000592578 SREBF2Q12772 1141 aa18.39■□□□□ 0.53
PSME3-215ENST00000592578 DOK7Q18PE1 504 aa18.39■□□□□ 0.53
PSME3-215ENST00000592578 CCDC27Q2M243 656 aa18.39■□□□□ 0.53
PSME3-215ENST00000592578 HABP4Q5JVS0 413 aaKnown RBP18.39■□□□□ 0.53
PSME3-215ENST00000592578 ANGEL2Q5VTE6 544 aaKnown RBP18.39■□□□□ 0.53
PSME3-215ENST00000592578 FKTNO75072 461 aa18.38■□□□□ 0.53
PSME3-215ENST00000592578 SCARF1Q14162 830 aa18.38■□□□□ 0.53
PSME3-215ENST00000592578 TTLL12Q14166 644 aaPredicted RBP18.38■□□□□ 0.53
PSME3-215ENST00000592578 INTS3Q68E01 1043 aaKnown RBP18.38■□□□□ 0.53
PSME3-215ENST00000592578 AGBL3Q8NEM8 1001 aa18.38■□□□□ 0.53
PSME3-215ENST00000592578 PITPNM2Q9BZ72 1349 aa18.38■□□□□ 0.53
PSME3-215ENST00000592578 DUOX1Q9NRD9 1551 aa18.38■□□□□ 0.53
PSME3-215ENST00000592578 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
PSME3-215ENST00000592578 ISCA1Q9BUE6 129 aa18.37■□□□□ 0.53
PSME3-215ENST00000592578 POLLQ9UGP5 575 aa18.37■□□□□ 0.53
PSME3-215ENST00000592578 TAF1P21675 1872 aa18.37■□□□□ 0.53
PSME3-215ENST00000592578 HSP90B1P14625 803 aaKnown RBP18.36■□□□□ 0.53
PSME3-215ENST00000592578 TM4SF4P48230 202 aa18.36■□□□□ 0.53
PSME3-215ENST00000592578 GOLGA2Q08379 1002 aa18.36■□□□□ 0.53
PSME3-215ENST00000592578 SF3B3Q15393 1217 aaKnown RBP18.36■□□□□ 0.53
PSME3-215ENST00000592578 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
PSME3-215ENST00000592578 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
PSME3-215ENST00000592578 RIC3Q7Z5B4 369 aa18.36■□□□□ 0.53
PSME3-215ENST00000592578 WWC1Q8IX03 1113 aa18.36■□□□□ 0.53
PSME3-215ENST00000592578 RTL9Q8NET4 1388 aa18.36■□□□□ 0.53
PSME3-215ENST00000592578 ATP5J2-PTCD1G3V325 749 aa18.35■□□□□ 0.53
PSME3-215ENST00000592578 ALDH1A1P00352 501 aa18.35■□□□□ 0.53
PSME3-215ENST00000592578 ZNF280AP59817 542 aaPredicted RBP18.35■□□□□ 0.53
PSME3-215ENST00000592578 GPSM2P81274 684 aa18.35■□□□□ 0.53
PSME3-215ENST00000592578 TBC1D16Q8TBP0 767 aa18.35■□□□□ 0.53
PSME3-215ENST00000592578 CELF1Q92879 486 aaKnown RBP18.35■□□□□ 0.53
PSME3-215ENST00000592578 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
PSME3-215ENST00000592578 USP17L8P0C7I0 530 aa18.34■□□□□ 0.53
PSME3-215ENST00000592578 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
PSME3-215ENST00000592578 RSBN1LQ6PCB5 846 aaPredicted RBP18.34■□□□□ 0.53
PSME3-215ENST00000592578 PHAXQ9H814 394 aaKnown RBP18.34■□□□□ 0.53
PSME3-215ENST00000592578 KCNQ5Q9NR82 932 aa18.34■□□□□ 0.53
PSME3-215ENST00000592578 UBE2Q2LH0YL09 131 aa18.33■□□□□ 0.52
PSME3-215ENST00000592578 RPS8P62241 208 aaKnown RBP18.33■□□□□ 0.52
PSME3-215ENST00000592578 ZNF428Q96B54 188 aa18.33■□□□□ 0.52
PSME3-215ENST00000592578 MYOZ2Q9NPC6 264 aa18.33■□□□□ 0.52
PSME3-215ENST00000592578 GGA1Q9UJY5 639 aa18.33■□□□□ 0.52
PSME3-215ENST00000592578 ZNF609O15014 1411 aa18.32■□□□□ 0.52
PSME3-215ENST00000592578 IL16Q14005 1332 aa18.32■□□□□ 0.52
PSME3-215ENST00000592578 UFL1O94874 794 aa18.32■□□□□ 0.52
PSME3-215ENST00000592578 DDX58O95786 925 aaKnown RBP18.32■□□□□ 0.52
PSME3-215ENST00000592578 ARMC9Q7Z3E5 817 aa18.32■□□□□ 0.52
PSME3-215ENST00000592578 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
PSME3-215ENST00000592578 TSR2Q969E8 191 aaKnown RBP18.32■□□□□ 0.52
PSME3-215ENST00000592578 FAM89AQ96GI7 184 aa18.32■□□□□ 0.52
PSME3-215ENST00000592578 CFHR5Q9BXR6 569 aa18.32■□□□□ 0.52
PSME3-215ENST00000592578 PODXL2Q9NZ53 605 aa18.32■□□□□ 0.52
PSME3-215ENST00000592578 ASTN2O75129 1339 aaPredicted RBP18.31■□□□□ 0.52
PSME3-215ENST00000592578 OGFOD1Q8N543 542 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms