RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 E9PSI1 815 aa17.67■□□□□ 0.42
APOC1-208ENST00000592535 UFL1O94874 794 aa17.67■□□□□ 0.42
APOC1-208ENST00000592535 ITGBL1O95965 494 aaPredicted RBP17.67■□□□□ 0.42
APOC1-208ENST00000592535 MAP1SQ66K74 1059 aaPredicted RBP17.67■□□□□ 0.42
APOC1-208ENST00000592535 ECE2O60344 883 aa17.66■□□□□ 0.42
APOC1-208ENST00000592535 SLFN5Q08AF3 891 aa17.66■□□□□ 0.42
APOC1-208ENST00000592535 TNIP1Q15025 636 aa17.66■□□□□ 0.42
APOC1-208ENST00000592535 DOK7Q18PE1 504 aa17.66■□□□□ 0.42
APOC1-208ENST00000592535 GGA1Q9UJY5 639 aa17.66■□□□□ 0.42
APOC1-208ENST00000592535 XDHP47989 1333 aa17.66■□□□□ 0.42
APOC1-208ENST00000592535 USP50Q70EL3 339 aaPredicted RBP17.65■□□□□ 0.42
APOC1-208ENST00000592535 CNTROBQ8N137 903 aa17.65■□□□□ 0.42
APOC1-208ENST00000592535 CDCA7LQ96GN5 454 aa17.65■□□□□ 0.42
APOC1-208ENST00000592535 BCL2L13Q9BXK5 485 aa17.65■□□□□ 0.42
APOC1-208ENST00000592535 ZC3H12CQ9C0D7 883 aaKnown RBP17.65■□□□□ 0.42
APOC1-208ENST00000592535 PSME4Q14997 1843 aa17.65■□□□□ 0.42
APOC1-208ENST00000592535 PSMD14O00487 310 aa17.64■□□□□ 0.41
APOC1-208ENST00000592535 CSF1RP07333 972 aa17.64■□□□□ 0.41
APOC1-208ENST00000592535 FAM161AQ3B820 660 aa17.64■□□□□ 0.41
APOC1-208ENST00000592535 MRPL50Q8N5N7 158 aaKnown RBP17.64■□□□□ 0.41
APOC1-208ENST00000592535 KCNQ5Q9NR82 932 aa17.64■□□□□ 0.41
APOC1-208ENST00000592535 CREBZFQ9NS37 354 aa17.64■□□□□ 0.41
APOC1-208ENST00000592535 ADARB2Q9NS39 739 aaKnown RBP17.64■□□□□ 0.41
APOC1-208ENST00000592535 BSDC1Q9NW68 430 aaPredicted RBP17.64■□□□□ 0.41
APOC1-208ENST00000592535 MINPP1Q9UNW1 487 aa17.64■□□□□ 0.41
APOC1-208ENST00000592535 SHTN1A0MZ66 631 aa17.63■□□□□ 0.41
APOC1-208ENST00000592535 ITGA6P23229 1130 aa17.63■□□□□ 0.41
APOC1-208ENST00000592535 ATP2B4P23634 1241 aa17.63■□□□□ 0.41
APOC1-208ENST00000592535 SLC4A10Q6U841 1118 aa17.63■□□□□ 0.41
APOC1-208ENST00000592535 JMYQ8N9B5 988 aa17.63■□□□□ 0.41
APOC1-208ENST00000592535 ZBTB12Q9Y330 459 aaPredicted RBP17.63■□□□□ 0.41
APOC1-208ENST00000592535 A0A1B0GUL6 1792 aa17.62■□□□□ 0.41
APOC1-208ENST00000592535 WTIPA6NIX2 430 aaPredicted RBP17.62■□□□□ 0.41
APOC1-208ENST00000592535 IGHMBP2P38935 993 aaKnown RBP17.62■□□□□ 0.41
APOC1-208ENST00000592535 FOXO4P98177 505 aa17.62■□□□□ 0.41
APOC1-208ENST00000592535 TRPM7Q96QT4 1865 aa17.62■□□□□ 0.41
APOC1-208ENST00000592535 G3V3G9 751 aa17.61■□□□□ 0.41
APOC1-208ENST00000592535 GRM8O00222 908 aa17.61■□□□□ 0.41
APOC1-208ENST00000592535 ALDH1L1O75891 902 aa17.61■□□□□ 0.41
APOC1-208ENST00000592535 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
APOC1-208ENST00000592535 SSH1Q8WYL5 1049 aa17.61■□□□□ 0.41
APOC1-208ENST00000592535 SRCIN1Q9C0H9 1055 aa17.61■□□□□ 0.41
APOC1-208ENST00000592535 CNOT7Q9UIV1 285 aaKnown RBP17.61■□□□□ 0.41
APOC1-208ENST00000592535 TMEM88BA6NKF7 163 aa17.6■□□□□ 0.41
APOC1-208ENST00000592535 HIRAP54198 1017 aaPredicted RBP17.6■□□□□ 0.41
APOC1-208ENST00000592535 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
APOC1-208ENST00000592535 MICALL2Q8IY33 904 aa17.6■□□□□ 0.41
APOC1-208ENST00000592535 TRMT2AQ8IZ69 625 aaKnown RBP17.6■□□□□ 0.41
APOC1-208ENST00000592535 TRPM4Q8TD43 1214 aa17.6■□□□□ 0.41
APOC1-208ENST00000592535 MKRN1Q9UHC7 482 aaKnown RBP17.6■□□□□ 0.41
APOC1-208ENST00000592535 MED23Q9ULK4 1368 aa17.59■□□□□ 0.41
APOC1-208ENST00000592535 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
APOC1-208ENST00000592535 H7C1D1 291 aa17.59■□□□□ 0.41
APOC1-208ENST00000592535 CCT4P50991 539 aaKnown RBP17.59■□□□□ 0.41
APOC1-208ENST00000592535 FMR1Q06787 632 aaKnown RBP eCLIP17.59■□□□□ 0.41
APOC1-208ENST00000592535 DPF2Q92785 391 aa17.59■□□□□ 0.41
APOC1-208ENST00000592535 MPHOSPH8Q99549 860 aa17.59■□□□□ 0.41
APOC1-208ENST00000592535 C9orf78Q9NZ63 289 aaPredicted RBP17.59■□□□□ 0.41
APOC1-208ENST00000592535 CHMP3Q9Y3E7 222 aa17.59■□□□□ 0.41
APOC1-208ENST00000592535 ZNF646O15015 1829 aaPredicted RBP17.58■□□□□ 0.41
APOC1-208ENST00000592535 PTPRCP08575 1304 aa17.58■□□□□ 0.4
APOC1-208ENST00000592535 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.4
APOC1-208ENST00000592535 POLR2AP24928 1970 aaKnown RBP17.57■□□□□ 0.4
APOC1-208ENST00000592535 TRAF5O00463 557 aa17.57■□□□□ 0.4
APOC1-208ENST00000592535 VIL1P09327 827 aaKnown RBP17.57■□□□□ 0.4
APOC1-208ENST00000592535 RPS12P25398 132 aaKnown RBP17.57■□□□□ 0.4
APOC1-208ENST00000592535 IFIT5Q13325 482 aaKnown RBP17.57■□□□□ 0.4
APOC1-208ENST00000592535 SAMD7Q7Z3H4 446 aa17.57■□□□□ 0.4
APOC1-208ENST00000592535 PGAP2Q9UHJ9 254 aa17.57■□□□□ 0.4
APOC1-208ENST00000592535 CNTNAP1P78357 1384 aa17.56■□□□□ 0.4
APOC1-208ENST00000592535 CHRNDQ07001 517 aa17.56■□□□□ 0.4
APOC1-208ENST00000592535 ALDH1L2Q3SY69 923 aa17.56■□□□□ 0.4
APOC1-208ENST00000592535 TXNRD3Q86VQ6 643 aa17.56■□□□□ 0.4
APOC1-208ENST00000592535 SUCLG2Q96I99 432 aa17.56■□□□□ 0.4
APOC1-208ENST00000592535 ANKRD2Q9GZV1 360 aa17.56■□□□□ 0.4
APOC1-208ENST00000592535 LEMD3Q9Y2U8 911 aa17.56■□□□□ 0.4
APOC1-208ENST00000592535 ZNF804BA4D1E1 1349 aa17.55■□□□□ 0.4
APOC1-208ENST00000592535 EGFRP00533 1210 aa17.55■□□□□ 0.4
APOC1-208ENST00000592535 NBPF7P0C2Y1 421 aaPredicted RBP17.55■□□□□ 0.4
APOC1-208ENST00000592535 KLRK1P26718 216 aa17.55■□□□□ 0.4
APOC1-208ENST00000592535 TBC1D10BQ4KMP7 808 aaPredicted RBP17.55■□□□□ 0.4
APOC1-208ENST00000592535 DIEXFQ68CQ4 756 aaKnown RBP17.55■□□□□ 0.4
APOC1-208ENST00000592535 PODNQ7Z5L7 613 aa17.55■□□□□ 0.4
APOC1-208ENST00000592535 MIER1Q8N108 512 aa17.55■□□□□ 0.4
APOC1-208ENST00000592535 ZC3H15Q8WU90 426 aaKnown RBP17.55■□□□□ 0.4
APOC1-208ENST00000592535 KAZALD1Q96I82 304 aa17.55■□□□□ 0.4
APOC1-208ENST00000592535 GLIS2Q9BZE0 524 aaPredicted RBP17.55■□□□□ 0.4
APOC1-208ENST00000592535 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
APOC1-208ENST00000592535 ZNF609O15014 1411 aa17.55■□□□□ 0.4
APOC1-208ENST00000592535 UTYO14607 1347 aa17.54■□□□□ 0.4
APOC1-208ENST00000592535 RBM26Q5T8P6 1007 aaKnown RBP17.54■□□□□ 0.4
APOC1-208ENST00000592535 RSBN1LQ6PCB5 846 aaPredicted RBP17.54■□□□□ 0.4
APOC1-208ENST00000592535 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
APOC1-208ENST00000592535 USP17L3A6NCW0 530 aa17.53■□□□□ 0.4
APOC1-208ENST00000592535 USP17L4A6NCW7 530 aa17.53■□□□□ 0.4
APOC1-208ENST00000592535 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
APOC1-208ENST00000592535 USP17L1Q7RTZ2 530 aa17.53■□□□□ 0.4
APOC1-208ENST00000592535 AGBL3Q8NEM8 1001 aa17.53■□□□□ 0.4
APOC1-208ENST00000592535 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
APOC1-208ENST00000592535 ABT1Q9ULW3 272 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms