RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 MPHOSPH8Q99549 860 aa12.17□□□□□ -0.46
TPM4-215ENST00000592138 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
TPM4-215ENST00000592138 LRRFIP2Q9Y608 721 aaKnown RBP12.17□□□□□ -0.46
TPM4-215ENST00000592138 RASSF7Q02833 373 aa12.16□□□□□ -0.46
TPM4-215ENST00000592138 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
TPM4-215ENST00000592138 DPP8Q6V1X1 898 aaPredicted RBP12.16□□□□□ -0.46
TPM4-215ENST00000592138 MPNDQ8N594 471 aa12.16□□□□□ -0.46
TPM4-215ENST00000592138 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
TPM4-215ENST00000592138 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
TPM4-215ENST00000592138 CHMP3Q9Y3E7 222 aa12.16□□□□□ -0.46
TPM4-215ENST00000592138 XDHP47989 1333 aa12.15□□□□□ -0.46
TPM4-215ENST00000592138 CACNA1SQ13698 1873 aa12.15□□□□□ -0.46
TPM4-215ENST00000592138 LTBP1Q14766 1721 aa12.15□□□□□ -0.46
TPM4-215ENST00000592138 DUOX1Q9NRD9 1551 aa12.15□□□□□ -0.46
TPM4-215ENST00000592138 RFX5P48382 616 aaPredicted RBP12.15□□□□□ -0.46
TPM4-215ENST00000592138 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
TPM4-215ENST00000592138 ANKRD2Q9GZV1 360 aa12.15□□□□□ -0.46
TPM4-215ENST00000592138 GPBP1L1Q9HC44 474 aaPredicted RBP12.15□□□□□ -0.46
TPM4-215ENST00000592138 WDR90Q96KV7 1748 aa12.14□□□□□ -0.47
TPM4-215ENST00000592138 IARSP41252 1262 aaKnown RBP12.14□□□□□ -0.47
TPM4-215ENST00000592138 PRELPP51888 382 aa12.14□□□□□ -0.47
TPM4-215ENST00000592138 GPSM2P81274 684 aa12.14□□□□□ -0.47
TPM4-215ENST00000592138 PTPN12Q05209 780 aaKnown RBP12.14□□□□□ -0.47
TPM4-215ENST00000592138 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
TPM4-215ENST00000592138 LDHAL6AQ6ZMR3 332 aa12.14□□□□□ -0.47
TPM4-215ENST00000592138 EYA3Q99504 573 aa12.14□□□□□ -0.47
TPM4-215ENST00000592138 ZBTB40Q9NUA8 1239 aa12.14□□□□□ -0.47
TPM4-215ENST00000592138 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
TPM4-215ENST00000592138 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
TPM4-215ENST00000592138 MROH5Q6ZUA9 1318 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 CIAO1O76071 339 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 C20orf194Q5TEA3 1177 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 SLC51AQ86UW1 340 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 TBC1D16Q8TBP0 767 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 COPRSQ9NQ92 184 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 CNNM1Q9NRU3 951 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 ANKIB1Q9P2G1 1089 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 GGA1Q9UJY5 639 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 LEMD3Q9Y2U8 911 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 RIPOR2Q9Y4F9 1068 aa12.13□□□□□ -0.47
TPM4-215ENST00000592138 KIF3CO14782 793 aa12.12□□□□□ -0.47
TPM4-215ENST00000592138 SRGAP3O43295 1099 aa12.12□□□□□ -0.47
TPM4-215ENST00000592138 CHRNDQ07001 517 aa12.12□□□□□ -0.47
TPM4-215ENST00000592138 ZNF594Q96JF6 807 aaPredicted RBP12.12□□□□□ -0.47
TPM4-215ENST00000592138 ZNF277Q9NRM2 450 aaPredicted RBP12.12□□□□□ -0.47
TPM4-215ENST00000592138 POLLQ9UGP5 575 aa12.12□□□□□ -0.47
TPM4-215ENST00000592138 TAF1P21675 1872 aa12.12□□□□□ -0.47
TPM4-215ENST00000592138 MED23Q9ULK4 1368 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 PPIP5K2O43314 1243 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 UFL1O94874 794 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 ATP8B2P98198 1209 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 AAMPQ13685 434 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 POLA2Q14181 598 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 WASHC4Q2M389 1173 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 RPAP2Q8IXW5 612 aaPredicted RBP12.11□□□□□ -0.47
TPM4-215ENST00000592138 DNAJC5GQ8N7S2 189 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 JDP2Q8WYK2 163 aa12.11□□□□□ -0.47
TPM4-215ENST00000592138 C6orf229H3BNL8 230 aa12.1□□□□□ -0.47
TPM4-215ENST00000592138 FZD9O00144 591 aa12.1□□□□□ -0.47
TPM4-215ENST00000592138 EYA2O00167 538 aa12.1□□□□□ -0.47
TPM4-215ENST00000592138 IL15P40933 162 aaPredicted RBP12.1□□□□□ -0.47
TPM4-215ENST00000592138 CEP85Q6P2H3 762 aa12.1□□□□□ -0.47
TPM4-215ENST00000592138 C15orf52Q6ZUT6 534 aaKnown RBP12.1□□□□□ -0.47
TPM4-215ENST00000592138 LARGE2Q8N3Y3 721 aa12.1□□□□□ -0.47
TPM4-215ENST00000592138 VGLL2Q8N8G2 317 aa12.1□□□□□ -0.47
TPM4-215ENST00000592138 SBF1O95248 1867 aa12.1□□□□□ -0.47
TPM4-215ENST00000592138 ZNF804BA4D1E1 1349 aa12.1□□□□□ -0.47
TPM4-215ENST00000592138 PNMA6EA0A0J9YXQ4 647 aa12.09□□□□□ -0.47
TPM4-215ENST00000592138 UBE4AQ14139 1066 aa12.09□□□□□ -0.47
TPM4-215ENST00000592138 AOC3Q16853 763 aa12.09□□□□□ -0.47
TPM4-215ENST00000592138 LRRC24Q50LG9 513 aa12.09□□□□□ -0.47
TPM4-215ENST00000592138 ATG9AQ7Z3C6 839 aa12.09□□□□□ -0.47
TPM4-215ENST00000592138 NIM1KQ8IY84 436 aa12.09□□□□□ -0.47
TPM4-215ENST00000592138 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
TPM4-215ENST00000592138 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
TPM4-215ENST00000592138 PUS3Q9BZE2 481 aaKnown RBP12.09□□□□□ -0.47
TPM4-215ENST00000592138 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
TPM4-215ENST00000592138 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.47
TPM4-215ENST00000592138 COL4A5P29400 1685 aa12.08□□□□□ -0.48
TPM4-215ENST00000592138 PDE8BO95263 885 aa12.08□□□□□ -0.48
TPM4-215ENST00000592138 METTL24Q5JXM2 366 aa12.08□□□□□ -0.48
TPM4-215ENST00000592138 C1orf115Q9H7X2 142 aa12.08□□□□□ -0.48
TPM4-215ENST00000592138 ZNRF3Q9ULT6 936 aa12.08□□□□□ -0.48
TPM4-215ENST00000592138 IRS2Q9Y4H2 1338 aa12.08□□□□□ -0.48
TPM4-215ENST00000592138 DICER1Q9UPY3 1922 aaKnown RBP12.07□□□□□ -0.48
TPM4-215ENST00000592138 SPEF2Q9C093 1822 aa12.07□□□□□ -0.48
TPM4-215ENST00000592138 GLTPD2A6NH11 291 aa12.07□□□□□ -0.48
TPM4-215ENST00000592138 HMMRO75330 724 aa12.07□□□□□ -0.48
TPM4-215ENST00000592138 KCNJ4P48050 445 aa12.07□□□□□ -0.48
TPM4-215ENST00000592138 APLP1P51693 650 aa12.07□□□□□ -0.48
TPM4-215ENST00000592138 PUM3Q15397 648 aaKnown RBP12.07□□□□□ -0.48
TPM4-215ENST00000592138 DPY19L2Q6NUT2 758 aa12.07□□□□□ -0.48
TPM4-215ENST00000592138 PODNQ7Z5L7 613 aa12.07□□□□□ -0.48
TPM4-215ENST00000592138 NOP58Q9Y2X3 529 aaKnown RBP12.07□□□□□ -0.48
TPM4-215ENST00000592138 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
TPM4-215ENST00000592138 A0A1B0GUL6 1792 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms