RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SMC4Q9NTJ3 1288 aa34.5■■■■□ 3.11
SMAD4-213ENST00000591914 GGA1Q9UJY5 639 aa34.5■■■■□ 3.11
SMAD4-213ENST00000591914 XDHP47989 1333 aa34.5■■■■□ 3.11
SMAD4-213ENST00000591914 YDJCA8MPS7 323 aa34.49■■■■□ 3.11
SMAD4-213ENST00000591914 UFL1O94874 794 aa34.49■■■■□ 3.11
SMAD4-213ENST00000591914 C9orf78Q9NZ63 289 aaPredicted RBP34.49■■■■□ 3.11
SMAD4-213ENST00000591914 RIMBP2O15034 1052 aa34.48■■■■□ 3.11
SMAD4-213ENST00000591914 CHADLQ6NUI6 762 aa34.48■■■■□ 3.11
SMAD4-213ENST00000591914 GPR101Q96P66 508 aaPredicted RBP34.48■■■■□ 3.11
SMAD4-213ENST00000591914 MINPP1Q9UNW1 487 aa34.48■■■■□ 3.11
SMAD4-213ENST00000591914 ADAMTSL1Q8N6G6 1762 aa34.48■■■■□ 3.11
SMAD4-213ENST00000591914 CIAPIN1Q6FI81 312 aa34.47■■■■□ 3.11
SMAD4-213ENST00000591914 LDHDQ86WU2 507 aa34.47■■■■□ 3.11
SMAD4-213ENST00000591914 LMOD1P29536 600 aaPredicted RBP34.46■■■■□ 3.11
SMAD4-213ENST00000591914 IGHMBP2P38935 993 aaKnown RBP34.46■■■■□ 3.11
SMAD4-213ENST00000591914 PNMA8AQ86V59 439 aaPredicted RBP34.46■■■■□ 3.11
SMAD4-213ENST00000591914 ZC3H12CQ9C0D7 883 aaKnown RBP34.46■■■■□ 3.11
SMAD4-213ENST00000591914 DBNDD1Q9H9R9 158 aa34.46■■■■□ 3.11
SMAD4-213ENST00000591914 RAD17O75943 681 aa34.45■■■■□ 3.11
SMAD4-213ENST00000591914 HNRNPUQ00839 825 aaKnown RBP eCLIP34.45■■■■□ 3.11
SMAD4-213ENST00000591914 TNIP1Q15025 636 aa34.45■■■■□ 3.11
SMAD4-213ENST00000591914 EPHA10Q5JZY3 1008 aa34.45■■■■□ 3.11
SMAD4-213ENST00000591914 UTYO14607 1347 aa34.45■■■■□ 3.11
SMAD4-213ENST00000591914 ATP2B4P23634 1241 aa34.44■■■■□ 3.1
SMAD4-213ENST00000591914 BRPF1P55201 1214 aaPredicted RBP34.44■■■■□ 3.1
SMAD4-213ENST00000591914 EAPPQ56P03 285 aaPredicted RBP34.44■■■■□ 3.1
SMAD4-213ENST00000591914 ANKRD18BA2A2Z9 1011 aa34.43■■■■□ 3.1
SMAD4-213ENST00000591914 EPS15P42566 896 aa34.43■■■■□ 3.1
SMAD4-213ENST00000591914 LMBR1LQ6UX01 489 aa34.43■■■■□ 3.1
SMAD4-213ENST00000591914 GPRC5DQ9NZD1 345 aa34.43■■■■□ 3.1
SMAD4-213ENST00000591914 ECE2O60344 883 aa34.42■■■■□ 3.1
SMAD4-213ENST00000591914 DOK7Q18PE1 504 aa34.42■■■■□ 3.1
SMAD4-213ENST00000591914 NBPF7P0C2Y1 421 aaPredicted RBP34.41■■■■□ 3.1
SMAD4-213ENST00000591914 GMPSP49915 693 aaPredicted RBP34.41■■■■□ 3.1
SMAD4-213ENST00000591914 IFIT5Q13325 482 aaKnown RBP34.41■■■■□ 3.1
SMAD4-213ENST00000591914 MPHOSPH8Q99549 860 aa34.41■■■■□ 3.1
SMAD4-213ENST00000591914 RARSP54136 660 aaKnown RBP34.4■■■■□ 3.1
SMAD4-213ENST00000591914 KAZALD1Q96I82 304 aa34.4■■■■□ 3.1
SMAD4-213ENST00000591914 SUCLG2Q96I99 432 aa34.39■■■■□ 3.1
SMAD4-213ENST00000591914 CHMP3Q9Y3E7 222 aa34.39■■■■□ 3.1
SMAD4-213ENST00000591914 WTIPA6NIX2 430 aaPredicted RBP34.38■■■■□ 3.09
SMAD4-213ENST00000591914 CCT4P50991 539 aaKnown RBP34.38■■■■□ 3.09
SMAD4-213ENST00000591914 NOB1Q9ULX3 412 aaKnown RBP34.38■■■■□ 3.09
SMAD4-213ENST00000591914 USP50Q70EL3 339 aaPredicted RBP34.37■■■■□ 3.09
SMAD4-213ENST00000591914 ANKRD2Q9GZV1 360 aa34.37■■■■□ 3.09
SMAD4-213ENST00000591914 KCNQ5Q9NR82 932 aa34.37■■■■□ 3.09
SMAD4-213ENST00000591914 MED23Q9ULK4 1368 aa34.36■■■■□ 3.09
SMAD4-213ENST00000591914 SCN9AQ15858 1988 aa34.36■■■■□ 3.09
SMAD4-213ENST00000591914 PSMD14O00487 310 aa34.36■■■■□ 3.09
SMAD4-213ENST00000591914 ADARB2Q9NS39 739 aaKnown RBP34.36■■■■□ 3.09
SMAD4-213ENST00000591914 CLEC11AQ9Y240 323 aa34.36■■■■□ 3.09
SMAD4-213ENST00000591914 LEMD3Q9Y2U8 911 aa34.36■■■■□ 3.09
SMAD4-213ENST00000591914 CCDC57Q2TAC2 916 aa34.35■■■■□ 3.09
SMAD4-213ENST00000591914 USP44Q9H0E7 712 aa34.35■■■■□ 3.09
SMAD4-213ENST00000591914 G3V3G9 751 aa34.34■■■■□ 3.09
SMAD4-213ENST00000591914 HTRA3P83110 453 aa34.34■■■■□ 3.09
SMAD4-213ENST00000591914 DCAF8Q5TAQ9 597 aa34.34■■■■□ 3.09
SMAD4-213ENST00000591914 DNAJC5GQ8N7S2 189 aa34.34■■■■□ 3.09
SMAD4-213ENST00000591914 CHRNDQ07001 517 aa34.33■■■■□ 3.09
SMAD4-213ENST00000591914 PASKQ96RG2 1323 aa34.32■■■■□ 3.09
SMAD4-213ENST00000591914 ITGBL1O95965 494 aaPredicted RBP34.32■■■■□ 3.08
SMAD4-213ENST00000591914 RABL6Q3YEC7 729 aaPredicted RBP34.32■■■■□ 3.08
SMAD4-213ENST00000591914 DPF2Q92785 391 aa34.32■■■■□ 3.08
SMAD4-213ENST00000591914 API5Q9BZZ5 524 aaKnown RBP34.32■■■■□ 3.08
SMAD4-213ENST00000591914 ZBTB12Q9Y330 459 aaPredicted RBP34.32■■■■□ 3.08
SMAD4-213ENST00000591914 KIF16BQ96L93 1317 aa34.31■■■■□ 3.08
SMAD4-213ENST00000591914 A0A1B0GUL6 1792 aa34.31■■■■□ 3.08
SMAD4-213ENST00000591914 BICC1Q9H694 974 aaKnown RBP34.31■■■■□ 3.08
SMAD4-213ENST00000591914 PSME4Q14997 1843 aa34.31■■■■□ 3.08
SMAD4-213ENST00000591914 ZNF804BA4D1E1 1349 aa34.3■■■■□ 3.08
SMAD4-213ENST00000591914 VIL1P09327 827 aaKnown RBP34.3■■■■□ 3.08
SMAD4-213ENST00000591914 RPS12P25398 132 aaKnown RBP34.3■■■■□ 3.08
SMAD4-213ENST00000591914 MAP1SQ66K74 1059 aaPredicted RBP34.3■■■■□ 3.08
SMAD4-213ENST00000591914 ZNF594Q96JF6 807 aaPredicted RBP34.3■■■■□ 3.08
SMAD4-213ENST00000591914 CNOT7Q9UIV1 285 aaKnown RBP34.3■■■■□ 3.08
SMAD4-213ENST00000591914 TAF7LQ5H9L4 462 aa34.29■■■■□ 3.08
SMAD4-213ENST00000591914 PODNQ7Z5L7 613 aa34.29■■■■□ 3.08
SMAD4-213ENST00000591914 CNTROBQ8N137 903 aa34.29■■■■□ 3.08
SMAD4-213ENST00000591914 ANKRD44Q8N8A2 993 aa34.29■■■■□ 3.08
SMAD4-213ENST00000591914 ARHGAP45Q92619 1136 aa34.29■■■■□ 3.08
SMAD4-213ENST00000591914 ZBED9Q6R2W3 1325 aa34.29■■■■□ 3.08
SMAD4-213ENST00000591914 LDHAL6AQ6ZMR3 332 aa34.28■■■■□ 3.08
SMAD4-213ENST00000591914 ZNF609O15014 1411 aa34.28■■■■□ 3.08
SMAD4-213ENST00000591914 SHTN1A0MZ66 631 aa34.27■■■■□ 3.08
SMAD4-213ENST00000591914 TXNRD3Q86VQ6 643 aa34.27■■■■□ 3.08
SMAD4-213ENST00000591914 MICALL2Q8IY33 904 aa34.27■■■■□ 3.08
SMAD4-213ENST00000591914 H7C1D1 291 aa34.26■■■■□ 3.08
SMAD4-213ENST00000591914 KLRK1P26718 216 aa34.25■■■■□ 3.07
SMAD4-213ENST00000591914 COA1Q9GZY4 146 aa34.25■■■■□ 3.07
SMAD4-213ENST00000591914 TAF5LO75529 589 aa34.24■■■■□ 3.07
SMAD4-213ENST00000591914 KCNJ4P48050 445 aa34.24■■■■□ 3.07
SMAD4-213ENST00000591914 HELBQ8NG08 1087 aaPredicted RBP34.24■■■■□ 3.07
SMAD4-213ENST00000591914 TRPM4Q8TD43 1214 aa34.24■■■■□ 3.07
SMAD4-213ENST00000591914 CNNM1Q9NRU3 951 aa34.24■■■■□ 3.07
SMAD4-213ENST00000591914 IRS2Q9Y4H2 1338 aa34.24■■■■□ 3.07
SMAD4-213ENST00000591914 HIRAP54198 1017 aaPredicted RBP34.23■■■■□ 3.07
SMAD4-213ENST00000591914 CREBZFQ9NS37 354 aa34.23■■■■□ 3.07
SMAD4-213ENST00000591914 USP17L3A6NCW0 530 aa34.22■■■■□ 3.07
SMAD4-213ENST00000591914 USP17L4A6NCW7 530 aa34.22■■■■□ 3.07
SMAD4-213ENST00000591914 RSBN1LQ6PCB5 846 aaPredicted RBP34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms