RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 ATP5J2-PTCD1G3V325 749 aa12.89□□□□□ -0.35
RETREG3-211ENST00000591547 KIF4BQ2VIQ3 1234 aa12.89□□□□□ -0.35
RETREG3-211ENST00000591547 CTU1Q7Z7A3 348 aaKnown RBP12.89□□□□□ -0.35
RETREG3-211ENST00000591547 RASAL3Q86YV0 1011 aa12.89□□□□□ -0.35
RETREG3-211ENST00000591547 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
RETREG3-211ENST00000591547 RIPK4P57078 832 aa12.88□□□□□ -0.35
RETREG3-211ENST00000591547 HSP90AB3PQ58FF7 597 aa12.88□□□□□ -0.35
RETREG3-211ENST00000591547 ANGEL2Q5VTE6 544 aaKnown RBP12.88□□□□□ -0.35
RETREG3-211ENST00000591547 TBC1D16Q8TBP0 767 aa12.88□□□□□ -0.35
RETREG3-211ENST00000591547 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
RETREG3-211ENST00000591547 TBC1D8O95759 1140 aa12.87□□□□□ -0.35
RETREG3-211ENST00000591547 SCARF1Q14162 830 aa12.87□□□□□ -0.35
RETREG3-211ENST00000591547 PRAMEF18Q5VWM3 479 aa12.87□□□□□ -0.35
RETREG3-211ENST00000591547 SULF1Q8IWU6 871 aa12.87□□□□□ -0.35
RETREG3-211ENST00000591547 CHPF2Q9P2E5 772 aa12.87□□□□□ -0.35
RETREG3-211ENST00000591547 UBE2Q2LH0YL09 131 aa12.86□□□□□ -0.35
RETREG3-211ENST00000591547 VIL1P09327 827 aaKnown RBP12.86□□□□□ -0.35
RETREG3-211ENST00000591547 RPS12P25398 132 aaKnown RBP12.86□□□□□ -0.35
RETREG3-211ENST00000591547 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
RETREG3-211ENST00000591547 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
RETREG3-211ENST00000591547 PRPF38BQ5VTL8 546 aaKnown RBP12.86□□□□□ -0.35
RETREG3-211ENST00000591547 TMC4Q7Z404 712 aa12.86□□□□□ -0.35
RETREG3-211ENST00000591547 ISCA1Q9BUE6 129 aa12.86□□□□□ -0.35
RETREG3-211ENST00000591547 SEC31BQ9NQW1 1179 aa12.86□□□□□ -0.35
RETREG3-211ENST00000591547 WTIPA6NIX2 430 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-211ENST00000591547 ZNF296Q8WUU4 475 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-211ENST00000591547 JARID2Q92833 1246 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-211ENST00000591547 LAS1LQ9Y4W2 734 aaKnown RBP12.85□□□□□ -0.35
RETREG3-211ENST00000591547 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
RETREG3-211ENST00000591547 CCDC85AQ96PX6 553 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-211ENST00000591547 EYA3Q99504 573 aa12.84□□□□□ -0.35
RETREG3-211ENST00000591547 ZC3H12CQ9C0D7 883 aaKnown RBP12.84□□□□□ -0.35
RETREG3-211ENST00000591547 R3HDMLQ9H3Y0 253 aa12.84□□□□□ -0.35
RETREG3-211ENST00000591547 PSME4Q14997 1843 aa12.83□□□□□ -0.35
RETREG3-211ENST00000591547 G3V3G9 751 aa12.83□□□□□ -0.36
RETREG3-211ENST00000591547 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
RETREG3-211ENST00000591547 UFL1O94874 794 aa12.83□□□□□ -0.36
RETREG3-211ENST00000591547 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
RETREG3-211ENST00000591547 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
RETREG3-211ENST00000591547 DCAF8Q5TAQ9 597 aa12.83□□□□□ -0.36
RETREG3-211ENST00000591547 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.36
RETREG3-211ENST00000591547 PLBD2Q8NHP8 589 aa12.83□□□□□ -0.36
RETREG3-211ENST00000591547 MXD3Q9BW11 206 aa12.83□□□□□ -0.36
RETREG3-211ENST00000591547 HDAC9Q9UKV0 1011 aa12.83□□□□□ -0.36
RETREG3-211ENST00000591547 PAPPA2Q9BXP8 1791 aa12.83□□□□□ -0.36
RETREG3-211ENST00000591547 ZNF280AP59817 542 aaPredicted RBP12.82□□□□□ -0.36
RETREG3-211ENST00000591547 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
RETREG3-211ENST00000591547 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
RETREG3-211ENST00000591547 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
RETREG3-211ENST00000591547 NBPF9Q3BBW0 867 aa12.81□□□□□ -0.36
RETREG3-211ENST00000591547 HDGFL1Q5TGJ6 251 aa12.81□□□□□ -0.36
RETREG3-211ENST00000591547 GMLQ99445 158 aa12.81□□□□□ -0.36
RETREG3-211ENST00000591547 MYOZ2Q9NPC6 264 aa12.81□□□□□ -0.36
RETREG3-211ENST00000591547 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
RETREG3-211ENST00000591547 ZNF646O15015 1829 aaPredicted RBP12.81□□□□□ -0.36
RETREG3-211ENST00000591547 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
RETREG3-211ENST00000591547 CHL1O00533 1208 aa12.8□□□□□ -0.36
RETREG3-211ENST00000591547 PRKG1Q13976 671 aa12.8□□□□□ -0.36
RETREG3-211ENST00000591547 TTLL12Q14166 644 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-211ENST00000591547 BABAM1Q9NWV8 329 aa12.8□□□□□ -0.36
RETREG3-211ENST00000591547 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
RETREG3-211ENST00000591547 GGA1Q9UJY5 639 aa12.8□□□□□ -0.36
RETREG3-211ENST00000591547 FZD1Q9UP38 647 aa12.8□□□□□ -0.36
RETREG3-211ENST00000591547 GPR25O00155 361 aa12.79□□□□□ -0.36
RETREG3-211ENST00000591547 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
RETREG3-211ENST00000591547 AGBL3Q8NEM8 1001 aa12.79□□□□□ -0.36
RETREG3-211ENST00000591547 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
RETREG3-211ENST00000591547 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
RETREG3-211ENST00000591547 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
RETREG3-211ENST00000591547 MYBBP1AQ9BQG0 1328 aaKnown RBP12.79□□□□□ -0.36
RETREG3-211ENST00000591547 RALBP1Q15311 655 aa12.78□□□□□ -0.36
RETREG3-211ENST00000591547 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-211ENST00000591547 PRKRIP1Q9H875 184 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-211ENST00000591547 SASH1O94885 1247 aa12.77□□□□□ -0.37
RETREG3-211ENST00000591547 TM4SF4P48230 202 aa12.77□□□□□ -0.37
RETREG3-211ENST00000591547 FKBP1BP68106 108 aa12.77□□□□□ -0.37
RETREG3-211ENST00000591547 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.37
RETREG3-211ENST00000591547 FBXO46Q6PJ61 603 aaPredicted RBP12.77□□□□□ -0.37
RETREG3-211ENST00000591547 FBXW7Q969H0 707 aa12.77□□□□□ -0.37
RETREG3-211ENST00000591547 MYD88Q99836 296 aa12.77□□□□□ -0.37
RETREG3-211ENST00000591547 DBF4Q9UBU7 674 aaPredicted RBP12.77□□□□□ -0.37
RETREG3-211ENST00000591547 MKI67P46013 3256 aaKnown RBP12.77□□□□□ -0.37
RETREG3-211ENST00000591547 POTEFA5A3E0 1075 aa12.76□□□□□ -0.37
RETREG3-211ENST00000591547 USP17L3A6NCW0 530 aa12.76□□□□□ -0.37
RETREG3-211ENST00000591547 USP17L4A6NCW7 530 aa12.76□□□□□ -0.37
RETREG3-211ENST00000591547 PKN2Q16513 984 aaKnown RBP12.76□□□□□ -0.37
RETREG3-211ENST00000591547 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
RETREG3-211ENST00000591547 USP17L1Q7RTZ2 530 aa12.76□□□□□ -0.37
RETREG3-211ENST00000591547 RIC3Q7Z5B4 369 aa12.76□□□□□ -0.37
RETREG3-211ENST00000591547 ZBTB38Q8NAP3 1195 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-211ENST00000591547 PITPNM2Q9BZ72 1349 aa12.76□□□□□ -0.37
RETREG3-211ENST00000591547 ZNF609O15014 1411 aa12.76□□□□□ -0.37
RETREG3-211ENST00000591547 HTTP42858 3142 aa12.75□□□□□ -0.37
RETREG3-211ENST00000591547 ELL2O00472 640 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-211ENST00000591547 WNT10BO00744 389 aa12.75□□□□□ -0.37
RETREG3-211ENST00000591547 FKTNO75072 461 aa12.75□□□□□ -0.37
RETREG3-211ENST00000591547 CENPFP49454 3210 aa12.75□□□□□ -0.37
RETREG3-211ENST00000591547 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
RETREG3-211ENST00000591547 TRIM28Q13263 835 aaKnown RBP12.75□□□□□ -0.37
RETREG3-211ENST00000591547 DACT2Q5SW24 774 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms