RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 MINPP1Q9UNW1 487 aa17.6■□□□□ 0.41
MBD1-225ENST00000591535 SBF1O95248 1867 aa17.6■□□□□ 0.41
MBD1-225ENST00000591535 C6orf229H3BNL8 230 aa17.59■□□□□ 0.41
MBD1-225ENST00000591535 SRGAP3O43295 1099 aa17.59■□□□□ 0.41
MBD1-225ENST00000591535 SUPT20HQ8NEM7 779 aa17.59■□□□□ 0.41
MBD1-225ENST00000591535 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
MBD1-225ENST00000591535 LTBP3Q9NS15 1303 aa17.58■□□□□ 0.41
MBD1-225ENST00000591535 LRRC37AA6NMS7 1700 aa17.58■□□□□ 0.41
MBD1-225ENST00000591535 KLHDC4Q8TBB5 520 aa17.58■□□□□ 0.41
MBD1-225ENST00000591535 XDHP47989 1333 aa17.57■□□□□ 0.4
MBD1-225ENST00000591535 IARSP41252 1262 aaKnown RBP17.57■□□□□ 0.4
MBD1-225ENST00000591535 PRELPP51888 382 aa17.57■□□□□ 0.4
MBD1-225ENST00000591535 CHRNDQ07001 517 aa17.57■□□□□ 0.4
MBD1-225ENST00000591535 ANKRD2Q9GZV1 360 aa17.57■□□□□ 0.4
MBD1-225ENST00000591535 GGA1Q9UJY5 639 aa17.57■□□□□ 0.4
MBD1-225ENST00000591535 UFL1O94874 794 aa17.56■□□□□ 0.4
MBD1-225ENST00000591535 HELBQ8NG08 1087 aaPredicted RBP17.56■□□□□ 0.4
MBD1-225ENST00000591535 TBC1D16Q8TBP0 767 aa17.56■□□□□ 0.4
MBD1-225ENST00000591535 PUS3Q9BZE2 481 aaKnown RBP17.56■□□□□ 0.4
MBD1-225ENST00000591535 PODXL2Q9NZ53 605 aa17.56■□□□□ 0.4
MBD1-225ENST00000591535 POLLQ9UGP5 575 aa17.56■□□□□ 0.4
MBD1-225ENST00000591535 SNED1Q8TER0 1413 aa17.56■□□□□ 0.4
MBD1-225ENST00000591535 PPIP5K2O43314 1243 aa17.55■□□□□ 0.4
MBD1-225ENST00000591535 KCNJ4P48050 445 aa17.55■□□□□ 0.4
MBD1-225ENST00000591535 RFX5P48382 616 aaPredicted RBP17.55■□□□□ 0.4
MBD1-225ENST00000591535 LARGE2Q8N3Y3 721 aa17.55■□□□□ 0.4
MBD1-225ENST00000591535 RTFDC1Q9BY42 306 aaPredicted RBP17.55■□□□□ 0.4
MBD1-225ENST00000591535 SIL1Q9H173 461 aa17.55■□□□□ 0.4
MBD1-225ENST00000591535 RIMBP2O15034 1052 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 TAF5LO75529 589 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 ATP2B4P23634 1241 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 YY1P25490 414 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
MBD1-225ENST00000591535 MTX1Q13505 466 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 JDP2Q8WYK2 163 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 EYA3Q99504 573 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 ZBTB40Q9NUA8 1239 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 ATP8B2P98198 1209 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 AOC3Q16853 763 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 LRRC24Q50LG9 513 aa17.54■□□□□ 0.4
MBD1-225ENST00000591535 GPR101Q96P66 508 aaPredicted RBP17.54■□□□□ 0.4
MBD1-225ENST00000591535 ZC3H12CQ9C0D7 883 aaKnown RBP17.54■□□□□ 0.4
MBD1-225ENST00000591535 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
MBD1-225ENST00000591535 DICER1Q9UPY3 1922 aaKnown RBP17.53■□□□□ 0.4
MBD1-225ENST00000591535 PNMA6EA0A0J9YXQ4 647 aa17.53■□□□□ 0.4
MBD1-225ENST00000591535 EYA2O00167 538 aa17.53■□□□□ 0.4
MBD1-225ENST00000591535 METTL24Q5JXM2 366 aa17.53■□□□□ 0.4
MBD1-225ENST00000591535 CRBNQ96SW2 442 aa17.53■□□□□ 0.4
MBD1-225ENST00000591535 VPS33BQ9H267 617 aa17.53■□□□□ 0.4
MBD1-225ENST00000591535 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
MBD1-225ENST00000591535 MROH5Q6ZUA9 1318 aa17.52■□□□□ 0.4
MBD1-225ENST00000591535 G3V3G9 751 aa17.52■□□□□ 0.4
MBD1-225ENST00000591535 DCAF8Q5TAQ9 597 aa17.52■□□□□ 0.4
MBD1-225ENST00000591535 COPRSQ9NQ92 184 aa17.52■□□□□ 0.4
MBD1-225ENST00000591535 LEMD3Q9Y2U8 911 aa17.52■□□□□ 0.4
MBD1-225ENST00000591535 ZNF804BA4D1E1 1349 aa17.52■□□□□ 0.39
MBD1-225ENST00000591535 LTBP1Q14766 1721 aa17.51■□□□□ 0.39
MBD1-225ENST00000591535 WTIPA6NIX2 430 aaPredicted RBP17.51■□□□□ 0.39
MBD1-225ENST00000591535 KIAA2012Q0VF49 1180 aa17.51■□□□□ 0.39
MBD1-225ENST00000591535 CEP85Q6P2H3 762 aa17.51■□□□□ 0.39
MBD1-225ENST00000591535 NIM1KQ8IY84 436 aa17.51■□□□□ 0.39
MBD1-225ENST00000591535 DUOX1Q9NRD9 1551 aa17.51■□□□□ 0.39
MBD1-225ENST00000591535 TIAM2Q8IVF5 1701 aa17.5■□□□□ 0.39
MBD1-225ENST00000591535 SNAP23O00161 211 aa17.5■□□□□ 0.39
MBD1-225ENST00000591535 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
MBD1-225ENST00000591535 DOK7Q18PE1 504 aa17.5■□□□□ 0.39
MBD1-225ENST00000591535 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
MBD1-225ENST00000591535 SSH3Q8TE77 659 aa17.5■□□□□ 0.39
MBD1-225ENST00000591535 FBXO3Q9UK99 471 aa17.5■□□□□ 0.39
MBD1-225ENST00000591535 CIAO1O76071 339 aa17.49■□□□□ 0.39
MBD1-225ENST00000591535 IL15P40933 162 aaPredicted RBP17.49■□□□□ 0.39
MBD1-225ENST00000591535 OS9Q13438 667 aaPredicted RBP17.49■□□□□ 0.39
MBD1-225ENST00000591535 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
MBD1-225ENST00000591535 A0A1B0GUL6 1792 aa17.48■□□□□ 0.39
MBD1-225ENST00000591535 SURF6O75683 361 aaKnown RBP17.48■□□□□ 0.39
MBD1-225ENST00000591535 PDE8BO95263 885 aa17.48■□□□□ 0.39
MBD1-225ENST00000591535 POLA2Q14181 598 aa17.48■□□□□ 0.39
MBD1-225ENST00000591535 ATG9AQ7Z3C6 839 aa17.48■□□□□ 0.39
MBD1-225ENST00000591535 ZNF526Q8TF50 670 aaPredicted RBP17.48■□□□□ 0.39
MBD1-225ENST00000591535 DBNDD1Q9H9R9 158 aa17.48■□□□□ 0.39
MBD1-225ENST00000591535 ZC3H4Q9UPT8 1303 aaKnown RBP17.48■□□□□ 0.39
MBD1-225ENST00000591535 HMMRO75330 724 aa17.47■□□□□ 0.39
MBD1-225ENST00000591535 EIF6P56537 245 aaKnown RBP17.47■□□□□ 0.39
MBD1-225ENST00000591535 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
MBD1-225ENST00000591535 DPY19L2Q6NUT2 758 aa17.47■□□□□ 0.39
MBD1-225ENST00000591535 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
MBD1-225ENST00000591535 MED23Q9ULK4 1368 aa17.47■□□□□ 0.39
MBD1-225ENST00000591535 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
MBD1-225ENST00000591535 UBE4AQ14139 1066 aa17.47■□□□□ 0.39
MBD1-225ENST00000591535 COL4A5P29400 1685 aa17.46■□□□□ 0.39
MBD1-225ENST00000591535 FZD9O00144 591 aa17.46■□□□□ 0.39
MBD1-225ENST00000591535 KLRK1P26718 216 aa17.46■□□□□ 0.39
MBD1-225ENST00000591535 TXNRD3Q86VQ6 643 aa17.46■□□□□ 0.39
MBD1-225ENST00000591535 ECE2O60344 883 aa17.45■□□□□ 0.38
MBD1-225ENST00000591535 PUM3Q15397 648 aaKnown RBP17.45■□□□□ 0.38
MBD1-225ENST00000591535 VGLL2Q8N8G2 317 aa17.45■□□□□ 0.38
MBD1-225ENST00000591535 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
MBD1-225ENST00000591535 RAD17O75943 681 aa17.44■□□□□ 0.38
MBD1-225ENST00000591535 SIRT2Q8IXJ6 389 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms